Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF161

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
173,602	+		GFF160	0.40	-0.2
173,603	-		GFF160	0.40	+0.2
173,603	-		GFF160	0.40	+0.4
173,603	-		GFF160	0.40	-0.3
173,603	-		GFF160	0.40	-0.2
173,861	+		GFF160	0.57	-1.1
173,861	+		GFF160	0.57	-0.1
173,938	+		GFF160	0.62	+0.5
173,938	+		GFF160	0.62	+1.0
174,023	-		GFF160	0.68	-0.0
174,298	+		GFF160	0.86	-0.7
174,969	+		GFF161	0.24	-0.6
175,000	-		GFF161	0.25	-1.4
175,000	-		GFF161	0.25	-0.7
175,332	+		GFF161	0.42	-0.1
176,136	+		GFF161	0.84	-1.1
176,217	+		GFF161	0.88	-0.8
176,218	-		GFF161	0.88	-0.5
176,218	-		GFF161	0.88	-0.1
176,886	+		GFF162	0.36	-0.1
176,886	+		GFF162	0.36	-0.2
177,205	-		GFF162	0.64	-0.6
177,429	+		GFF162	0.84	+0.3
177,429	+		GFF162	0.84	+0.5
177,429	+		GFF162	0.84	+0.3
177,430	-		GFF162	0.84	-0.2