Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1207

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
69,488	+		GFF1206	0.52	+0.9
69,489	-		GFF1206	0.52	+1.2
69,797	+		GFF1206	0.71	-0.1
69,797	+		GFF1206	0.71	+1.4
69,797	+		GFF1206	0.71	-0.1
69,797	+		GFF1206	0.71	-0.2
69,797	+		GFF1206	0.71	+0.4
69,797	+		GFF1206	0.71	-0.1
69,797	+		GFF1206	0.71	+0.2
69,797	+		GFF1206	0.71	-0.9
69,797	+		GFF1206	0.71	+0.4
69,827	+		GFF1206	0.73	-0.7
69,827	+		GFF1206	0.73	+0.7
69,828	-		GFF1206	0.73	+0.9
69,893	+		GFF1206	0.77	-0.1
69,965	+		GFF1206	0.82	+0.4
69,965	+		GFF1206	0.82	+1.3
69,965	+		GFF1206	0.82	-0.3
69,965	+		GFF1206	0.82	-0.0
69,965	+		GFF1206	0.82	+0.1
69,965	+		GFF1206	0.82	-0.2
69,965	+		GFF1206	0.82	-0.2
69,965	+		GFF1206	0.82	+0.6
69,965	+		GFF1206	0.82	-1.3
69,965	+		GFF1206	0.82	-0.2
69,966	-		GFF1206	0.82	+0.5
69,966	-		GFF1206	0.82	-1.3
69,966	-		GFF1206	0.82	+0.1
69,966	-		GFF1206	0.82	+0.1
69,966	-		GFF1206	0.82	-0.7
69,966	-		GFF1206	0.82	+0.3
69,966	-		GFF1206	0.82	-0.5
69,966	-		GFF1206	0.82	-0.0
69,966	-		GFF1206	0.82	+0.1
70,148	+				-0.1
70,148	+				-0.9
70,148	+				+0.4
70,149	-				+0.5
70,149	-				+0.0
70,149	-				-0.4
70,150	+				+0.1
70,155	-				+0.8
70,155	-				-0.5
71,400	+				-0.7
71,430	-				-0.1
71,465	-				-0.4