Strain Fitness in Escherichia fergusonii Becca around EFB2_03899

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
4,085,764	+		EFB2_03897	0.82	-0.4
4,085,764	+		EFB2_03897	0.82	-0.0
4,085,764	+		EFB2_03897	0.82	+1.3
4,085,765	-		EFB2_03897	0.83	-1.3
4,085,765	-		EFB2_03897	0.83	+1.5
4,085,765	-		EFB2_03897	0.83	+0.9
4,085,765	-		EFB2_03897	0.83	-2.1
4,085,765	-		EFB2_03897	0.83	-1.8
4,085,765	-		EFB2_03897	0.83	-0.8
4,085,766	+		EFB2_03897	0.83	-0.1
4,085,766	+		EFB2_03897	0.83	-0.4
4,085,766	+		EFB2_03897	0.83	+2.9
4,085,766	+		EFB2_03897	0.83	-0.6
4,085,766	+		EFB2_03897	0.83	+0.9
4,085,767	-		EFB2_03897	0.83	-0.8
4,085,767	-		EFB2_03897	0.83	-1.6
4,085,767	-		EFB2_03897	0.83	-0.7
4,085,767	-		EFB2_03897	0.83	-1.6
4,085,767	-		EFB2_03897	0.83	-1.3
4,085,767	-		EFB2_03897	0.83	-2.0
4,085,767	-		EFB2_03897	0.83	+0.4
4,085,788	+		EFB2_03897	0.87	+1.5
4,085,788	+		EFB2_03897	0.87	-1.0
4,085,789	-		EFB2_03897	0.87	+0.6
4,085,789	-		EFB2_03897	0.87	+0.4
4,085,789	-		EFB2_03897	0.87	-3.1
4,085,821	+				-1.8
4,085,822	-				+0.2
4,085,831	+				+2.1
4,085,832	-				-2.8
4,085,854	+				-0.5
4,085,855	-				-1.4
4,085,855	-				-0.6
4,085,855	-				+0.3
4,085,855	-				-1.4
4,085,874	+				-1.8
4,085,891	-				+1.5
4,085,891	-				+1.3
4,085,906	-				+0.7
4,085,916	+				+1.3
4,085,916	+				-0.6
4,085,916	+				-0.3
4,085,917	-				-2.6
4,085,917	-				+0.1
4,085,962	+		EFB2_03898	0.13	-0.6
4,085,962	+		EFB2_03898	0.13	+0.2
4,085,963	-		EFB2_03898	0.13	-0.1
4,085,968	+		EFB2_03898	0.14	-0.4
4,085,968	+		EFB2_03898	0.14	-0.8
4,085,968	+		EFB2_03898	0.14	+0.7
4,085,968	+		EFB2_03898	0.14	-1.7
4,085,968	+		EFB2_03898	0.14	-1.8
4,085,968	+		EFB2_03898	0.14	+3.7
4,085,968	+		EFB2_03898	0.14	+1.1
4,085,968	+		EFB2_03898	0.14	+0.2
4,085,969	-		EFB2_03898	0.14	-0.2
4,085,969	-		EFB2_03898	0.14	+0.0
4,085,969	-		EFB2_03898	0.14	-2.8
4,085,969	-		EFB2_03898	0.14	+1.5
4,085,981	+		EFB2_03898	0.16	+0.7
4,085,982	-		EFB2_03898	0.16	-1.4
4,085,982	-		EFB2_03898	0.16	+0.4
4,086,057	+		EFB2_03898	0.26	+0.4
4,086,057	+		EFB2_03898	0.26	-0.3
4,086,058	-		EFB2_03898	0.27	-3.4
4,086,058	-		EFB2_03898	0.27	+1.1
4,086,058	-		EFB2_03898	0.27	+1.4
4,086,058	-		EFB2_03898	0.27	-1.6
4,086,058	-		EFB2_03898	0.27	+0.2
4,086,058	-		EFB2_03898	0.27	+1.0
4,086,101	+		EFB2_03898	0.33	-0.0
4,086,101	+		EFB2_03898	0.33	+0.3
4,086,102	-		EFB2_03898	0.33	-1.7
4,086,102	-		EFB2_03898	0.33	+2.6
4,086,113	+		EFB2_03898	0.34	-0.1
4,086,114	-		EFB2_03898	0.34	-0.3
4,086,114	-		EFB2_03898	0.34	+0.7
4,086,153	-		EFB2_03898	0.40	+0.8
4,086,180	+		EFB2_03898	0.44	-1.0
4,086,180	+		EFB2_03898	0.44	+0.4
4,086,182	+		EFB2_03898	0.44	+1.1
4,086,182	+		EFB2_03898	0.44	-1.9
4,086,182	+		EFB2_03898	0.44	+0.3
4,086,182	+		EFB2_03898	0.44	+1.4
4,086,183	-		EFB2_03898	0.44	+1.3
4,086,183	-		EFB2_03898	0.44	+0.3
4,086,183	-		EFB2_03898	0.44	-1.3
4,086,183	-		EFB2_03898	0.44	+0.2
4,086,183	-		EFB2_03898	0.44	+0.4
4,086,183	-		EFB2_03898	0.44	+0.4
4,086,202	+		EFB2_03898	0.47	+0.6
4,086,208	-		EFB2_03898	0.48	-0.1
4,086,228	-		EFB2_03898	0.51	-2.3
4,086,235	+		EFB2_03898	0.52	-0.6
4,086,236	+		EFB2_03898	0.52	+0.6
4,086,236	+		EFB2_03898	0.52	-0.7
4,086,236	+		EFB2_03898	0.52	-2.0
4,086,236	+		EFB2_03898	0.52	+0.4
4,086,236	+		EFB2_03898	0.52	-0.1
4,086,236	+		EFB2_03898	0.52	-1.3
4,086,236	+		EFB2_03898	0.52	-0.5
4,086,237	-		EFB2_03898	0.52	-0.2
4,086,237	-		EFB2_03898	0.52	-2.1
4,086,237	-		EFB2_03898	0.52	-0.0
4,086,237	-		EFB2_03898	0.52	+0.1
4,086,237	-		EFB2_03898	0.52	+0.3
4,086,237	-		EFB2_03898	0.52	-0.1
4,086,237	-		EFB2_03898	0.52	+0.2
4,086,237	-		EFB2_03898	0.52	+0.5
4,086,237	-		EFB2_03898	0.52	-1.4
4,086,237	-		EFB2_03898	0.52	+0.4
4,086,237	-		EFB2_03898	0.52	+0.5
4,086,267	+		EFB2_03898	0.56	+6.5
4,086,267	+		EFB2_03898	0.56	-3.3
4,086,267	+		EFB2_03898	0.56	+0.1
4,086,267	+		EFB2_03898	0.56	+0.7
4,086,267	+		EFB2_03898	0.56	+0.3
4,086,267	+		EFB2_03898	0.56	-1.8
4,086,267	+		EFB2_03898	0.56	+1.5
4,086,268	-		EFB2_03898	0.56	-1.1
4,086,268	-		EFB2_03898	0.56	+0.1
4,086,268	-		EFB2_03898	0.56	-0.8
4,086,268	-		EFB2_03898	0.56	+0.7
4,086,268	-		EFB2_03898	0.56	-0.5
4,086,268	-		EFB2_03898	0.56	+0.1
4,086,268	-		EFB2_03898	0.56	+0.1
4,086,268	-		EFB2_03898	0.56	-0.4
4,086,269	+		EFB2_03898	0.56	-0.2
4,086,270	-		EFB2_03898	0.57	-1.4
4,086,270	-		EFB2_03898	0.57	+1.9
4,086,270	-		EFB2_03898	0.57	-0.1
4,086,282	+		EFB2_03898	0.58	+0.7
4,086,287	+		EFB2_03898	0.59	-1.0
4,086,287	+		EFB2_03898	0.59	+0.6
4,086,288	-		EFB2_03898	0.59	-1.1
4,086,312	+		EFB2_03898	0.63	+0.2
4,086,312	+		EFB2_03898	0.63	-0.4
4,086,312	+		EFB2_03898	0.63	+2.0
4,086,313	-		EFB2_03898	0.63	-0.1
4,086,395	+		EFB2_03898	0.74	+0.9
4,086,425	+		EFB2_03898	0.79	+0.1
4,086,425	+		EFB2_03898	0.79	+1.6
4,086,425	+		EFB2_03898	0.79	-0.3
4,086,425	+		EFB2_03898	0.79	+0.1
4,086,462	+		EFB2_03898	0.84	-0.6
4,086,463	-		EFB2_03898	0.84	+0.6
4,086,463	-		EFB2_03898	0.84	-0.8
4,086,472	+		EFB2_03898	0.85	+1.1
4,086,472	+		EFB2_03898	0.85	-0.3
4,086,472	+		EFB2_03898	0.85	-1.7
4,086,472	+		EFB2_03898	0.85	-0.8
4,086,472	+		EFB2_03898	0.85	-1.0
4,086,472	+		EFB2_03898	0.85	-1.5
4,086,472	+		EFB2_03898	0.85	+0.3
4,086,472	+		EFB2_03898	0.85	+0.7
4,086,472	+		EFB2_03898	0.85	+3.6
4,086,472	+		EFB2_03898	0.85	+1.0
4,086,472	+		EFB2_03898	0.85	+1.2
4,086,472	+		EFB2_03898	0.85	-0.5
4,086,473	-		EFB2_03898	0.85	+0.3
4,086,473	-		EFB2_03898	0.85	+0.3
4,086,473	-		EFB2_03898	0.85	-2.3
4,086,473	-		EFB2_03898	0.85	-0.8
4,086,473	-		EFB2_03898	0.85	+2.3
4,086,473	-		EFB2_03898	0.85	+1.0
4,086,473	-		EFB2_03898	0.85	-0.2
4,086,473	-		EFB2_03898	0.85	+2.2
4,086,473	-		EFB2_03898	0.85	-2.0
4,086,473	-		EFB2_03898	0.85	+0.3
4,086,473	-		EFB2_03898	0.85	-0.8
4,086,473	-		EFB2_03898	0.85	+0.4
4,086,473	-		EFB2_03898	0.85	-1.2
4,086,473	-		EFB2_03898	0.85	-1.1
4,086,500	-		EFB2_03898	0.89	-1.5
4,086,513	+				+2.4
4,086,513	+				+1.9
4,086,513	+				+1.7
4,086,513	+				-1.0
4,086,514	-				+0.7
4,086,514	-				+1.3
4,086,549	-				-1.1
4,086,549	-				-0.4
4,086,566	+				-0.8
4,086,566	+				-1.1
4,086,567	-				-1.0
4,086,567	-				+0.8
4,086,567	-				+0.1
4,086,573	+				-0.7
4,086,573	+				-3.0
4,086,573	+				+0.3
4,086,573	+				-0.2
4,086,573	+				+1.0
4,086,573	+				-0.6
4,086,573	+				+0.5
4,086,573	+				+0.1
4,086,573	+				+1.0
4,086,573	+				+0.3
4,086,573	+				+0.3
4,086,573	+				+0.5
4,086,573	+				+0.6
4,086,573	+				-1.0
4,086,573	+				+0.0
4,086,573	+				+0.8
4,086,574	-				-0.2
4,086,574	-				-0.7
4,086,574	-				-2.3
4,086,574	-				+1.0
4,086,574	-				-1.1
4,086,574	-				-0.2
4,086,574	-				-1.6
4,086,574	-				+0.3
4,086,574	-				+0.1
4,086,574	-				+0.0
4,086,574	-				+0.1
4,086,574	-				+0.1
4,086,574	-				+0.9
4,086,574	-				-0.0
4,086,574	-				-0.9
4,086,574	-				-1.0
4,086,574	-				+0.1
4,086,574	-				+0.4
4,086,576	+				+2.6
4,086,576	+				-3.8
4,086,581	+				+0.0
4,086,581	+				+0.5
4,086,581	+				+1.1
4,086,581	+				+0.7
4,086,581	+				+0.3
4,086,581	+				+0.7
4,086,581	+				+1.6
4,086,581	+				+1.3
4,086,581	+				+0.1
4,086,581	+				-0.8
4,086,581	+				-0.7
4,086,581	+				-0.4
4,086,581	+				+0.3
4,086,582	-				+0.4
4,086,582	-				+0.3
4,086,582	-				+0.7
4,086,582	-				+0.5
4,086,582	-				+2.2
4,086,582	-				+1.0
4,086,582	-				+0.7
4,086,582	-				+0.6
4,086,582	-				-0.5
4,086,582	-				+0.1
4,086,582	-				+1.1
4,086,582	-				-0.1
4,086,582	-				-1.1
4,086,582	-				-3.2
4,086,585	+				-1.9
4,086,585	+				-1.1
4,086,585	+				+0.7
4,086,585	+				-0.0
4,086,585	+				+1.0
4,086,585	+				+2.4
4,086,585	+				+0.4
4,086,585	+				+1.6
4,086,585	+				+0.1
4,086,586	-				-2.9
4,086,586	-				-0.3
4,086,586	-				-1.9
4,086,586	-				-0.3
4,086,586	-				-0.4
4,086,586	-				-2.8
4,086,586	-				-0.4
4,086,586	-				+1.0
4,086,598	+				-1.3
4,086,598	+				-1.6
4,086,599	-				-3.9
4,086,599	-				+1.0
4,086,599	-				-0.0
4,086,599	-				-0.4
4,086,621	+				-2.8
4,086,621	+				-1.2
4,086,622	-				+0.7
4,086,651	+				+0.8
4,086,651	+				-0.6
4,086,652	-				+0.6
4,086,652	-				+0.6
4,086,652	-				-0.8
4,086,652	-				+1.9
4,086,652	-				+1.5
4,086,652	-				+1.9
4,086,652	-				+0.1
4,086,661	+				+0.2
4,086,661	+				+0.6
4,086,661	+				-0.6
4,086,662	-				+0.1
4,086,662	-				+0.0
4,086,662	-				-0.4
4,086,662	-				+0.2
4,086,687	+				+0.0
4,086,687	+				-0.1
4,086,687	+				+2.4
4,086,688	-				-0.2
4,086,691	+				+0.9
4,086,691	+				+0.3
4,086,691	+				-1.1
4,086,691	+				-0.7
4,086,691	+				+0.2
4,086,691	+				-0.9
4,086,691	+				+0.7
4,086,691	+				-0.2
4,086,692	-				-2.4
4,086,692	-				+0.8
4,086,692	-				+0.1
4,086,692	-				-0.8
4,086,692	-				-0.9
4,086,692	-				-0.2
4,086,692	-				+2.0
4,086,693	+				+1.7
4,086,693	+				-2.6
4,086,693	+				+0.2
4,086,693	+				+0.7
4,086,773	+				-1.9
4,086,773	+				-0.2
4,086,774	-				+0.8
4,086,791	+				+0.4
4,086,791	+				-0.6
4,086,792	-				-1.3
4,086,792	-				-1.1
4,086,819	+		EFB2_03899	0.14	+2.4
4,086,819	+		EFB2_03899	0.14	-1.9
4,086,819	+		EFB2_03899	0.14	-0.6
4,086,843	+		EFB2_03899	0.20	-3.4
4,086,843	+		EFB2_03899	0.20	-4.0
4,086,843	+		EFB2_03899	0.20	+0.0
4,086,843	+		EFB2_03899	0.20	-2.9
4,086,843	+		EFB2_03899	0.20	-3.4
4,086,843	+		EFB2_03899	0.20	-1.3
4,086,843	+		EFB2_03899	0.20	-0.7
4,086,843	+		EFB2_03899	0.20	-1.6
4,086,843	+		EFB2_03899	0.20	-2.0
4,086,843	+		EFB2_03899	0.20	-3.3
4,086,843	+		EFB2_03899	0.20	-3.1
4,086,844	-		EFB2_03899	0.20	+3.0
4,086,844	-		EFB2_03899	0.20	-0.9
4,086,844	-		EFB2_03899	0.20	-0.9
4,086,844	-		EFB2_03899	0.20	-0.4
4,086,844	-		EFB2_03899	0.20	-0.2
4,086,844	-		EFB2_03899	0.20	-1.4
4,086,844	-		EFB2_03899	0.20	+1.6
4,086,844	-		EFB2_03899	0.20	+1.0
4,086,844	-		EFB2_03899	0.20	-2.0
4,086,844	-		EFB2_03899	0.20	+1.4
4,086,844	-		EFB2_03899	0.20	+0.4
4,086,845	+		EFB2_03899	0.20	-0.2
4,086,845	+		EFB2_03899	0.20	-2.4
4,086,845	+		EFB2_03899	0.20	-0.4
4,086,845	+		EFB2_03899	0.20	-2.6
4,086,845	+		EFB2_03899	0.20	-2.1
4,086,845	+		EFB2_03899	0.20	-1.6
4,086,845	+		EFB2_03899	0.20	-0.8
4,086,845	+		EFB2_03899	0.20	-1.2
4,086,845	+		EFB2_03899	0.20	-3.8
4,086,846	-		EFB2_03899	0.20	+0.4
4,086,846	-		EFB2_03899	0.20	-0.4
4,086,846	-		EFB2_03899	0.20	-0.8
4,086,846	-		EFB2_03899	0.20	-1.1
4,086,846	-		EFB2_03899	0.20	+0.4
4,086,896	+		EFB2_03899	0.31	-2.8
4,086,897	-		EFB2_03899	0.32	-1.2
4,086,929	+		EFB2_03899	0.39	-2.3
4,086,930	-		EFB2_03899	0.39	-0.2
4,086,935	+		EFB2_03899	0.40	-2.7
4,086,935	+		EFB2_03899	0.40	-1.1
4,086,935	+		EFB2_03899	0.40	-3.2
4,086,935	+		EFB2_03899	0.40	-0.1
4,086,935	+		EFB2_03899	0.40	-1.5
4,086,935	+		EFB2_03899	0.40	+1.7
4,086,935	+		EFB2_03899	0.40	-1.8
4,086,935	+		EFB2_03899	0.40	-2.5
4,086,935	+		EFB2_03899	0.40	+0.0
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4,087,789	-		EFB2_03900	0.59	-2.5
4,087,789	-		EFB2_03900	0.59	-1.8
4,087,789	-		EFB2_03900	0.59	-0.8
4,087,789	-		EFB2_03900	0.59	-1.7
4,087,789	-		EFB2_03900	0.59	+2.3
4,087,789	-		EFB2_03900	0.59	-0.7
4,087,789	-		EFB2_03900	0.59	-1.0
4,087,790	+		EFB2_03900	0.59	+2.1
4,087,790	+		EFB2_03900	0.59	+0.5
4,087,790	+		EFB2_03900	0.59	-2.6
4,087,790	+		EFB2_03900	0.59	-2.8
4,087,791	-		EFB2_03900	0.59	-0.0
4,087,791	-		EFB2_03900	0.59	+0.3
4,087,791	-		EFB2_03900	0.59	-3.0
4,087,791	-		EFB2_03900	0.59	-1.1
4,087,917	+		EFB2_03900	0.72	-0.4
4,087,917	+		EFB2_03900	0.72	+1.1
4,087,917	+		EFB2_03900	0.72	+1.1
4,087,917	+		EFB2_03900	0.72	-1.8
4,087,917	+		EFB2_03900	0.72	+0.2
4,087,917	+		EFB2_03900	0.72	+0.3
4,087,917	+		EFB2_03900	0.72	+0.3
4,087,918	-		EFB2_03900	0.73	-0.8
4,087,918	-		EFB2_03900	0.73	+0.8
4,087,918	-		EFB2_03900	0.73	+1.2
4,087,918	-		EFB2_03900	0.73	+1.3
4,087,918	-		EFB2_03900	0.73	+1.4
4,087,918	-		EFB2_03900	0.73	+1.0
4,087,918	-		EFB2_03900	0.73	+1.8
4,087,918	-		EFB2_03900	0.73	+0.4
4,087,918	-		EFB2_03900	0.73	-0.7
4,087,918	-		EFB2_03900	0.73	-1.0
4,087,918	-		EFB2_03900	0.73	+0.7
4,087,918	-		EFB2_03900	0.73	-3.1
4,087,918	-		EFB2_03900	0.73	-3.2
4,087,927	+		EFB2_03900	0.74	+0.6
4,088,047	+		EFB2_03900	0.87	+0.2
4,088,047	+		EFB2_03900	0.87	-0.0
4,088,048	-		EFB2_03900	0.87	-0.1
4,088,048	-		EFB2_03900	0.87	+1.1
4,088,174	+				-2.1
4,088,174	+				-1.4
4,088,174	+				+0.4
4,088,174	+				+0.4
4,088,174	+				+0.5
4,088,174	+				-3.2
4,088,175	-				-0.6
4,088,175	-				-0.9
4,088,175	-				+2.7
4,088,175	-				+1.1