Strain Fitness in Escherichia fergusonii Becca around EFB2_03690

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
3,857,120	+				+0.2
3,857,125	+				+1.0
3,857,126	-				-1.5
3,857,133	+				-2.1
3,857,141	-				+0.5
3,857,160	-				+0.7
3,857,218	-				-0.1
3,857,235	+				+0.4
3,857,263	+				+0.8
3,857,263	+				-0.7
3,857,270	+				+0.3
3,857,271	-				-1.4
3,857,282	+				-0.0
3,857,326	+				-0.2
3,857,326	+				+1.2
3,857,334	-				-0.8
3,857,339	+				-2.9
3,857,377	-				+0.7
3,857,404	+				-0.5
3,857,408	-				+3.2
3,857,448	+				-1.2
3,857,521	-		EFB2_03689	0.13	-2.6
3,857,521	-		EFB2_03689	0.13	-1.4
3,857,527	-		EFB2_03689	0.14	-0.5
3,857,527	-		EFB2_03689	0.14	-0.4
3,857,584	-		EFB2_03689	0.22	-0.8
3,857,611	-		EFB2_03689	0.26	+0.4
3,857,619	+		EFB2_03689	0.27	-0.6
3,857,678	-		EFB2_03689	0.36	-1.3
3,857,678	-		EFB2_03689	0.36	+1.4
3,857,678	-		EFB2_03689	0.36	-1.2
3,857,785	-		EFB2_03689	0.52	-0.0
3,857,785	-		EFB2_03689	0.52	+0.1
3,857,790	+		EFB2_03689	0.53	+0.5
3,857,790	+		EFB2_03689	0.53	+0.2
3,857,790	+		EFB2_03689	0.53	+1.7
3,857,790	+		EFB2_03689	0.53	-0.2
3,857,790	+		EFB2_03689	0.53	-0.7
3,857,790	+		EFB2_03689	0.53	-2.6
3,857,790	+		EFB2_03689	0.53	+0.1
3,857,790	+		EFB2_03689	0.53	-1.7
3,857,791	-		EFB2_03689	0.53	-1.7
3,857,791	-		EFB2_03689	0.53	+1.8
3,857,791	-		EFB2_03689	0.53	+0.6
3,857,791	-		EFB2_03689	0.53	-0.2
3,857,792	+		EFB2_03689	0.53	+1.6
3,857,793	-		EFB2_03689	0.53	-0.6
3,857,793	-		EFB2_03689	0.53	-0.0
3,857,794	+		EFB2_03689	0.53	+0.0
3,857,794	+		EFB2_03689	0.53	-1.6
3,857,794	+		EFB2_03689	0.53	-1.6
3,857,794	+		EFB2_03689	0.53	-1.0
3,857,794	+		EFB2_03689	0.53	-2.4
3,857,795	-		EFB2_03689	0.54	-0.3
3,857,795	-		EFB2_03689	0.54	-1.8
3,857,795	-		EFB2_03689	0.54	+0.8
3,857,795	-		EFB2_03689	0.54	+0.8
3,857,795	-		EFB2_03689	0.54	+0.2
3,857,795	-		EFB2_03689	0.54	-2.0
3,857,795	-		EFB2_03689	0.54	+1.8
3,857,838	-		EFB2_03689	0.60	+2.1
3,857,867	-		EFB2_03689	0.64	+0.6
3,857,915	-		EFB2_03689	0.71	+1.1
3,857,983	+		EFB2_03689	0.82	-0.3
3,858,005	+		EFB2_03689	0.85	-1.8
3,858,005	+		EFB2_03689	0.85	+0.2
3,858,006	-		EFB2_03689	0.85	-1.2
3,858,006	-		EFB2_03689	0.85	+0.9
3,858,007	+		EFB2_03689	0.85	+1.2
3,858,007	+		EFB2_03689	0.85	-0.1
3,858,007	+		EFB2_03689	0.85	-0.3
3,858,007	+		EFB2_03689	0.85	+0.1
3,858,008	-		EFB2_03689	0.85	+0.8
3,858,085	+				-0.0
3,858,091	+				+0.4
3,858,092	-				+1.1
3,858,092	-				+0.6
3,858,133	+				-0.3
3,858,133	+				+0.1
3,858,133	+				-2.2
3,858,133	+				+1.2
3,858,133	+				-0.8
3,858,133	+				-1.2
3,858,133	+				+1.1
3,858,133	+				-0.9
3,858,133	+				+1.0
3,858,133	+				+1.7
3,858,133	+				+1.4
3,858,133	+				-2.5
3,858,133	+				+0.7
3,858,133	+				+2.4
3,858,133	+				+0.5
3,858,133	+				+0.4
3,858,134	-				-1.4
3,858,134	-				-0.2
3,858,134	-				-0.4
3,858,134	-				+0.8
3,858,134	-				-1.3
3,858,134	-				-0.0
3,858,134	-				-0.4
3,858,134	-				-3.2
3,858,134	-				-0.2
3,858,134	-				-0.8
3,858,134	-				-0.2
3,858,134	-				+0.5
3,858,134	-				+1.5
3,858,134	-				-2.2
3,858,134	-				-0.4
3,858,135	+				+0.6
3,858,135	+				-0.8
3,858,135	+				-0.0
3,858,135	+				+0.5
3,858,135	+				-2.0
3,858,135	+				-1.4
3,858,135	+				-0.8
3,858,135	+				+3.3
3,858,135	+				-2.4
3,858,135	+				+0.8
3,858,135	+				-0.1
3,858,136	-				+0.0
3,858,136	-				+0.6
3,858,136	-				-0.6
3,858,136	-				+0.9
3,858,136	-				+0.0
3,858,136	-				+0.6
3,858,136	-				+0.2
3,858,136	-				-1.1
3,858,136	-				-1.8
3,858,139	+				-1.4
3,858,139	+				-1.8
3,858,139	+				-1.3
3,858,139	+				+0.5
3,858,139	+				-1.7
3,858,140	-				-3.6
3,858,140	-				-0.6
3,858,140	-				+0.2
3,858,140	-				+0.6
3,858,140	-				-0.2
3,858,154	-				-0.4
3,858,154	-				-0.4
3,858,159	+				-2.6
3,858,173	-				+0.0
3,858,173	-				+2.4
3,858,173	-				+1.3
3,858,178	-				+0.7
3,858,221	-				+0.6
3,858,221	-				+0.4
3,858,221	-				+0.4
3,858,221	-				+1.1
3,858,221	-				+0.3
3,858,222	+				+1.0
3,858,222	+				+0.5
3,858,222	+				-1.4
3,858,222	+				+0.3
3,858,222	+				-0.4
3,858,222	+				+0.3
3,858,222	+				-0.9
3,858,222	+				+0.0
3,858,222	+				-0.6
3,858,222	+				-0.0
3,858,222	+				+0.7
3,858,223	-				-2.8
3,858,223	-				-2.5
3,858,223	-				+0.1
3,858,223	-				-0.1
3,858,223	-				+0.4
3,858,223	-				-1.0
3,858,231	-				+0.6
3,858,231	-				-3.3
3,858,231	-				-2.2
3,858,231	-				+0.2
3,858,434	+		EFB2_03690	0.27	-1.0
3,858,434	+		EFB2_03690	0.27	-1.5
3,858,434	+		EFB2_03690	0.27	+1.5
3,858,434	+		EFB2_03690	0.27	+0.7
3,858,434	+		EFB2_03690	0.27	-0.2
3,858,434	+		EFB2_03690	0.27	-0.5
3,858,435	-		EFB2_03690	0.27	+1.2
3,858,435	-		EFB2_03690	0.27	-1.2
3,858,459	+		EFB2_03690	0.29	+0.2
3,858,459	+		EFB2_03690	0.29	-0.7
3,858,476	+		EFB2_03690	0.30	-1.0
3,858,476	+		EFB2_03690	0.30	+0.8
3,858,476	+		EFB2_03690	0.30	-1.9
3,858,476	+		EFB2_03690	0.30	+0.2
3,858,476	+		EFB2_03690	0.30	-0.6
3,858,476	+		EFB2_03690	0.30	+0.8
3,858,476	+		EFB2_03690	0.30	-2.0
3,858,476	+		EFB2_03690	0.30	+0.1
3,858,476	+		EFB2_03690	0.30	+0.4
3,858,476	+		EFB2_03690	0.30	+0.9
3,858,476	+		EFB2_03690	0.30	+0.8
3,858,476	+		EFB2_03690	0.30	-2.1
3,858,476	+		EFB2_03690	0.30	-2.3
3,858,476	+		EFB2_03690	0.30	-0.0
3,858,476	+		EFB2_03690	0.30	+1.5
3,858,476	+		EFB2_03690	0.30	+0.9
3,858,476	+		EFB2_03690	0.30	-0.1
3,858,476	+		EFB2_03690	0.30	-1.3
3,858,476	+		EFB2_03690	0.30	-1.4
3,858,476	+		EFB2_03690	0.30	+0.9
3,858,476	+		EFB2_03690	0.30	+2.1
3,858,476	+		EFB2_03690	0.30	+0.0
3,858,476	+		EFB2_03690	0.30	+0.9
3,858,476	+		EFB2_03690	0.30	+0.2
3,858,476	+		EFB2_03690	0.30	-0.0
3,858,476	+		EFB2_03690	0.30	-2.7
3,858,476	+		EFB2_03690	0.30	-0.1
3,858,476	+		EFB2_03690	0.30	+0.6
3,858,476	+		EFB2_03690	0.30	+1.0
3,858,476	+		EFB2_03690	0.30	-1.0
3,858,476	+		EFB2_03690	0.30	+1.4
3,858,476	+		EFB2_03690	0.30	+1.9
3,858,476	+		EFB2_03690	0.30	-1.1
3,858,476	+		EFB2_03690	0.30	+1.4
3,858,476	+		EFB2_03690	0.30	+0.4
3,858,476	+		EFB2_03690	0.30	+0.2
3,858,476	+		EFB2_03690	0.30	-0.3
3,858,476	+		EFB2_03690	0.30	-2.0
3,858,476	+		EFB2_03690	0.30	-0.6
3,858,476	+		EFB2_03690	0.30	+2.3
3,858,476	+		EFB2_03690	0.30	+0.7
3,858,476	+		EFB2_03690	0.30	-0.8
3,858,476	+		EFB2_03690	0.30	+0.1
3,858,476	+		EFB2_03690	0.30	-3.3
3,858,476	+		EFB2_03690	0.30	-0.8
3,858,476	+		EFB2_03690	0.30	-2.8
3,858,476	+		EFB2_03690	0.30	-0.4
3,858,476	+		EFB2_03690	0.30	+0.1
3,858,476	+		EFB2_03690	0.30	-0.2
3,858,476	+		EFB2_03690	0.30	+1.6
3,858,477	-		EFB2_03690	0.30	+1.6
3,858,477	-		EFB2_03690	0.30	+1.6
3,858,477	-		EFB2_03690	0.30	-1.5
3,858,477	-		EFB2_03690	0.30	-1.3
3,858,477	-		EFB2_03690	0.30	+0.6
3,858,477	-		EFB2_03690	0.30	-2.5
3,858,477	-		EFB2_03690	0.30	+4.0
3,858,477	-		EFB2_03690	0.30	+0.8
3,858,477	-		EFB2_03690	0.30	-1.9
3,858,477	-		EFB2_03690	0.30	+0.9
3,858,477	-		EFB2_03690	0.30	+0.5
3,858,477	-		EFB2_03690	0.30	-0.1
3,858,477	-		EFB2_03690	0.30	-1.1
3,858,477	-		EFB2_03690	0.30	+2.7
3,858,477	-		EFB2_03690	0.30	-2.1
3,858,477	-		EFB2_03690	0.30	+0.5
3,858,477	-		EFB2_03690	0.30	+2.7
3,858,477	-		EFB2_03690	0.30	+0.1
3,858,477	-		EFB2_03690	0.30	+2.2
3,858,477	-		EFB2_03690	0.30	-0.9
3,858,477	-		EFB2_03690	0.30	-0.5
3,858,477	-		EFB2_03690	0.30	+0.1
3,858,477	-		EFB2_03690	0.30	+1.3
3,858,477	-		EFB2_03690	0.30	-1.2
3,858,477	-		EFB2_03690	0.30	+1.0
3,858,477	-		EFB2_03690	0.30	-0.3
3,858,477	-		EFB2_03690	0.30	-1.4
3,858,477	-		EFB2_03690	0.30	+1.4
3,858,477	-		EFB2_03690	0.30	+0.5
3,858,477	-		EFB2_03690	0.30	-0.0
3,858,477	-		EFB2_03690	0.30	-1.8
3,858,477	-		EFB2_03690	0.30	-0.8
3,858,477	-		EFB2_03690	0.30	-2.3
3,858,477	-		EFB2_03690	0.30	+0.4
3,858,477	-		EFB2_03690	0.30	-1.6
3,858,477	-		EFB2_03690	0.30	+0.6
3,858,477	-		EFB2_03690	0.30	+0.4
3,858,477	-		EFB2_03690	0.30	+0.9
3,858,477	-		EFB2_03690	0.30	+0.2
3,858,477	-		EFB2_03690	0.30	-1.2
3,858,477	-		EFB2_03690	0.30	-0.6
3,858,477	-		EFB2_03690	0.30	+0.8
3,858,477	-		EFB2_03690	0.30	+0.2
3,858,477	-		EFB2_03690	0.30	-1.1
3,858,477	-		EFB2_03690	0.30	+0.5
3,858,477	-		EFB2_03690	0.30	+0.4
3,858,477	-		EFB2_03690	0.30	+1.3
3,858,477	-		EFB2_03690	0.30	-1.3
3,858,506	+		EFB2_03690	0.33	+0.6
3,858,506	+		EFB2_03690	0.33	-2.4
3,858,506	+		EFB2_03690	0.33	-1.0
3,858,506	+		EFB2_03690	0.33	+0.5
3,858,506	+		EFB2_03690	0.33	-0.0
3,858,506	+		EFB2_03690	0.33	-1.0
3,858,506	+		EFB2_03690	0.33	+0.0
3,858,506	+		EFB2_03690	0.33	+3.4
3,858,506	+		EFB2_03690	0.33	-2.2
3,858,506	+		EFB2_03690	0.33	+0.2
3,858,506	+		EFB2_03690	0.33	-0.3
3,858,507	-		EFB2_03690	0.33	+1.3
3,858,507	-		EFB2_03690	0.33	-1.3
3,858,507	-		EFB2_03690	0.33	-1.3
3,858,507	-		EFB2_03690	0.33	-0.7
3,858,507	-		EFB2_03690	0.33	-0.4
3,858,507	-		EFB2_03690	0.33	+1.3
3,858,507	-		EFB2_03690	0.33	-3.2
3,858,508	+		EFB2_03690	0.33	+1.4
3,858,508	+		EFB2_03690	0.33	+0.3
3,858,508	+		EFB2_03690	0.33	+0.8
3,858,508	+		EFB2_03690	0.33	-0.2
3,858,508	+		EFB2_03690	0.33	+0.4
3,858,508	+		EFB2_03690	0.33	+0.8
3,858,508	+		EFB2_03690	0.33	+0.3
3,858,508	+		EFB2_03690	0.33	-0.6
3,858,508	+		EFB2_03690	0.33	-0.2
3,858,508	+		EFB2_03690	0.33	+2.6
3,858,508	+		EFB2_03690	0.33	+0.6
3,858,508	+		EFB2_03690	0.33	-0.1
3,858,508	+		EFB2_03690	0.33	+2.2
3,858,508	+		EFB2_03690	0.33	-1.6
3,858,508	+		EFB2_03690	0.33	+1.4
3,858,508	+		EFB2_03690	0.33	+0.1
3,858,508	+		EFB2_03690	0.33	+0.1
3,858,508	+		EFB2_03690	0.33	-2.1
3,858,508	+		EFB2_03690	0.33	-1.5
3,858,508	+		EFB2_03690	0.33	-0.9
3,858,509	-		EFB2_03690	0.33	-1.5
3,858,509	-		EFB2_03690	0.33	-0.3
3,858,509	-		EFB2_03690	0.33	-1.8
3,858,509	-		EFB2_03690	0.33	+1.3
3,858,509	-		EFB2_03690	0.33	+1.9
3,858,509	-		EFB2_03690	0.33	-1.1
3,858,509	-		EFB2_03690	0.33	-2.7
3,858,509	-		EFB2_03690	0.33	+1.0
3,858,509	-		EFB2_03690	0.33	-1.8
3,858,509	-		EFB2_03690	0.33	+0.2
3,858,544	-		EFB2_03690	0.36	+1.4
3,858,585	+		EFB2_03690	0.39	+0.8
3,858,625	+		EFB2_03690	0.43	+1.7
3,858,625	+		EFB2_03690	0.43	-3.3
3,858,626	-		EFB2_03690	0.43	-0.3
3,858,639	+		EFB2_03690	0.44	-0.9
3,858,639	+		EFB2_03690	0.44	-1.2
3,858,639	+		EFB2_03690	0.44	-0.5
3,858,639	+		EFB2_03690	0.44	+1.0
3,858,712	+		EFB2_03690	0.50	+0.2
3,858,712	+		EFB2_03690	0.50	+1.5
3,858,712	+		EFB2_03690	0.50	-0.2
3,858,712	+		EFB2_03690	0.50	-3.0
3,858,712	+		EFB2_03690	0.50	-0.8
3,858,712	+		EFB2_03690	0.50	-0.1
3,859,353	-				+1.0
3,859,621	+		EFB2_03691	0.52	-1.7
3,859,705	+		EFB2_03691	0.68	+1.0
3,859,713	+		EFB2_03691	0.70	+1.1
3,859,713	+		EFB2_03691	0.70	+0.9
3,859,742	-		EFB2_03691	0.75	+1.0
3,859,814	+		EFB2_03691	0.89	-3.6
3,859,814	+		EFB2_03691	0.89	+0.6
3,859,814	+		EFB2_03691	0.89	-0.5
3,859,814	+		EFB2_03691	0.89	+0.4
3,859,819	+				-2.5
3,859,853	+				+0.1
3,859,854	-				+0.0
3,859,992	+		EFB2_03692	0.15	-2.8
3,860,002	+		EFB2_03692	0.17	-0.4
3,860,003	-		EFB2_03692	0.17	-1.8
3,860,003	-		EFB2_03692	0.17	+1.2
3,860,003	-		EFB2_03692	0.17	-0.8
3,860,047	-		EFB2_03692	0.22	+0.2
3,860,262	+		EFB2_03692	0.50	+1.1
3,860,262	+		EFB2_03692	0.50	+0.5
3,860,262	+		EFB2_03692	0.50	-1.4
3,860,262	+		EFB2_03692	0.50	-0.1
3,860,262	+		EFB2_03692	0.50	-1.0
3,860,262	+		EFB2_03692	0.50	+0.9
3,860,262	+		EFB2_03692	0.50	-1.4
3,860,262	+		EFB2_03692	0.50	-1.3
3,860,262	+		EFB2_03692	0.50	-1.1
3,860,266	+		EFB2_03692	0.51	+1.4
3,860,266	+		EFB2_03692	0.51	-1.2
3,860,266	+		EFB2_03692	0.51	+1.2
3,860,266	+		EFB2_03692	0.51	-0.4
3,860,306	+		EFB2_03692	0.56	+0.8
3,860,306	+		EFB2_03692	0.56	-0.6
3,860,306	+		EFB2_03692	0.56	+0.5
3,860,306	+		EFB2_03692	0.56	-0.4
3,860,306	+		EFB2_03692	0.56	-0.3
3,860,306	+		EFB2_03692	0.56	+0.8
3,860,306	+		EFB2_03692	0.56	+0.5
3,860,306	+		EFB2_03692	0.56	-0.6
3,860,306	+		EFB2_03692	0.56	+0.3
3,860,306	+		EFB2_03692	0.56	+0.2
3,860,307	-		EFB2_03692	0.56	+0.9
3,860,307	-		EFB2_03692	0.56	+1.2
3,860,307	-		EFB2_03692	0.56	+0.0
3,860,307	-		EFB2_03692	0.56	-3.0