Strain Fitness in Escherichia fergusonii Becca around EFB2_03191

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
3,351,248	+		EFB2_03190	0.44	+0.0
3,351,248	+		EFB2_03190	0.44	+0.9
3,351,249	-		EFB2_03190	0.44	+1.9
3,351,249	-		EFB2_03190	0.44	+1.9
3,351,273	+		EFB2_03190	0.45	+1.0
3,351,274	-		EFB2_03190	0.46	+1.0
3,351,291	+		EFB2_03190	0.47	+0.6
3,351,334	+		EFB2_03190	0.49	+0.0
3,351,335	-		EFB2_03190	0.49	+0.1
3,351,335	-		EFB2_03190	0.49	-0.5
3,351,354	+		EFB2_03190	0.50	-0.5
3,351,355	-		EFB2_03190	0.50	-1.7
3,351,366	+		EFB2_03190	0.51	+0.7
3,351,367	-		EFB2_03190	0.51	-2.0
3,351,393	+		EFB2_03190	0.52	+0.5
3,351,393	+		EFB2_03190	0.52	-1.3
3,351,393	+		EFB2_03190	0.52	-1.9
3,351,393	+		EFB2_03190	0.52	-1.3
3,351,394	-		EFB2_03190	0.53	+0.1
3,351,394	-		EFB2_03190	0.53	-0.5
3,351,394	-		EFB2_03190	0.53	-1.1
3,351,394	-		EFB2_03190	0.53	-0.1
3,351,394	-		EFB2_03190	0.53	+1.2
3,351,394	-		EFB2_03190	0.53	+0.3
3,351,401	+		EFB2_03190	0.53	-0.0
3,351,401	+		EFB2_03190	0.53	-0.3
3,351,401	+		EFB2_03190	0.53	-0.8
3,351,401	+		EFB2_03190	0.53	-0.2
3,351,401	+		EFB2_03190	0.53	+1.1
3,351,401	+		EFB2_03190	0.53	+0.2
3,351,401	+		EFB2_03190	0.53	-1.4
3,351,401	+		EFB2_03190	0.53	-1.3
3,351,401	+		EFB2_03190	0.53	-0.8
3,351,401	+		EFB2_03190	0.53	-0.2
3,351,401	+		EFB2_03190	0.53	+0.7
3,351,401	+		EFB2_03190	0.53	+1.5
3,351,401	+		EFB2_03190	0.53	-0.3
3,351,402	-		EFB2_03190	0.53	-1.0
3,351,402	-		EFB2_03190	0.53	+1.4
3,351,402	-		EFB2_03190	0.53	-1.0
3,351,402	-		EFB2_03190	0.53	-0.4
3,351,402	-		EFB2_03190	0.53	+1.1
3,351,402	-		EFB2_03190	0.53	-0.3
3,351,402	-		EFB2_03190	0.53	-1.2
3,351,402	-		EFB2_03190	0.53	+1.1
3,351,402	-		EFB2_03190	0.53	-0.1
3,351,402	-		EFB2_03190	0.53	+1.0
3,351,402	-		EFB2_03190	0.53	-0.0
3,351,402	-		EFB2_03190	0.53	+0.5
3,351,402	-		EFB2_03190	0.53	-1.3
3,351,405	+		EFB2_03190	0.53	-1.3
3,351,405	+		EFB2_03190	0.53	+3.2
3,351,405	+		EFB2_03190	0.53	+0.9
3,351,406	-		EFB2_03190	0.53	+0.5
3,351,406	-		EFB2_03190	0.53	+1.7
3,351,406	-		EFB2_03190	0.53	+0.7
3,351,406	-		EFB2_03190	0.53	+1.2
3,351,406	-		EFB2_03190	0.53	+0.7
3,351,406	-		EFB2_03190	0.53	-0.8
3,351,406	-		EFB2_03190	0.53	-0.6
3,351,406	-		EFB2_03190	0.53	+1.6
3,351,424	-		EFB2_03190	0.54	+0.6
3,351,490	-		EFB2_03190	0.58	+1.8
3,351,506	-		EFB2_03190	0.59	+1.2
3,351,536	+		EFB2_03190	0.61	+0.8
3,351,540	+		EFB2_03190	0.61	-1.2
3,351,540	+		EFB2_03190	0.61	-1.1
3,351,540	+		EFB2_03190	0.61	-0.1
3,351,540	+		EFB2_03190	0.61	-0.3
3,351,571	+		EFB2_03190	0.63	-0.3
3,351,588	+		EFB2_03190	0.64	-1.1
3,351,589	-		EFB2_03190	0.64	+0.9
3,351,618	+		EFB2_03190	0.66	+1.7
3,351,618	+		EFB2_03190	0.66	-0.4
3,351,618	+		EFB2_03190	0.66	-1.1
3,351,618	+		EFB2_03190	0.66	-0.7
3,351,618	+		EFB2_03190	0.66	+0.3
3,351,618	+		EFB2_03190	0.66	-2.5
3,351,618	+		EFB2_03190	0.66	+1.5
3,351,618	+		EFB2_03190	0.66	-2.6
3,351,618	+		EFB2_03190	0.66	-1.3
3,351,619	-		EFB2_03190	0.66	+1.5
3,351,619	-		EFB2_03190	0.66	+0.5
3,351,619	-		EFB2_03190	0.66	+1.4
3,351,619	-		EFB2_03190	0.66	+0.6
3,351,619	-		EFB2_03190	0.66	+0.8
3,351,619	-		EFB2_03190	0.66	-2.3
3,351,633	+		EFB2_03190	0.66	-0.3
3,351,659	-		EFB2_03190	0.68	-0.9
3,351,689	+		EFB2_03190	0.70	-0.5
3,351,689	+		EFB2_03190	0.70	+2.0
3,351,689	+		EFB2_03190	0.70	+0.4
3,351,689	+		EFB2_03190	0.70	+1.1
3,351,689	+		EFB2_03190	0.70	+0.3
3,351,690	-		EFB2_03190	0.70	+1.3
3,351,690	-		EFB2_03190	0.70	+1.2
3,351,690	-		EFB2_03190	0.70	-1.1
3,351,801	+		EFB2_03190	0.76	+0.7
3,351,802	-		EFB2_03190	0.76	-0.9
3,351,802	-		EFB2_03190	0.76	-2.6
3,351,802	-		EFB2_03190	0.76	-0.7
3,351,802	-		EFB2_03190	0.76	-2.7
3,351,827	+		EFB2_03190	0.78	-0.2
3,351,827	+		EFB2_03190	0.78	+3.3
3,351,828	-		EFB2_03190	0.78	+0.3
3,351,864	+		EFB2_03190	0.80	+1.6
3,351,864	+		EFB2_03190	0.80	+0.5
3,351,867	+		EFB2_03190	0.80	-0.1
3,351,868	-		EFB2_03190	0.80	+1.4
3,351,913	+		EFB2_03190	0.83	+0.7
3,351,927	+		EFB2_03190	0.84	-3.1
3,351,978	+		EFB2_03190	0.87	+0.4
3,351,984	+		EFB2_03190	0.87	-1.8
3,351,992	+		EFB2_03190	0.87	+0.9
3,352,086	-				-0.2
3,352,135	+				+1.3
3,352,135	+				+1.7
3,352,135	+				+1.3
3,352,135	+				-3.4
3,352,135	+				+0.1
3,352,135	+				+1.1
3,352,135	+				-0.3
3,352,135	+				-1.2
3,352,135	+				-1.3
3,352,135	+				-3.3
3,352,135	+				+0.1
3,352,135	+				-0.1
3,352,135	+				-2.9
3,352,135	+				-1.5
3,352,135	+				+1.0
3,352,135	+				+0.7
3,352,135	+				+0.2
3,352,135	+				-1.3
3,352,135	+				-2.7
3,352,135	+				-1.3
3,352,135	+				+0.2
3,352,135	+				+1.9
3,352,135	+				+0.7
3,352,135	+				+1.2
3,352,135	+				-2.9
3,352,135	+				+1.0
3,352,135	+				+0.5
3,352,136	-				+0.8
3,352,136	-				+0.4
3,352,136	-				-0.5
3,352,136	-				+1.4
3,352,136	-				+0.5
3,352,136	-				-3.1
3,352,136	-				-3.4
3,352,136	-				+1.2
3,352,136	-				-0.6
3,352,136	-				+0.6
3,352,136	-				-1.0
3,352,136	-				+1.4
3,352,136	-				+0.6
3,352,136	-				+0.6
3,352,136	-				+0.4
3,352,136	-				+2.4
3,352,136	-				+0.3
3,352,136	-				+0.3
3,352,136	-				+1.0
3,352,136	-				-0.8
3,352,136	-				+1.2
3,352,136	-				-1.7
3,352,136	-				-0.8
3,352,136	-				-0.3
3,352,136	-				-2.6
3,352,136	-				+0.1
3,352,136	-				-1.3
3,352,137	+				-1.2
3,352,137	+				+1.4
3,352,137	+				-1.0
3,352,137	+				-0.2
3,352,137	+				+0.7
3,352,137	+				+1.3
3,352,137	+				+0.7
3,352,137	+				-1.0
3,352,137	+				+0.6
3,352,137	+				+0.1
3,352,137	+				-1.6
3,352,137	+				+0.2
3,352,137	+				+0.6
3,352,137	+				-1.5
3,352,137	+				-2.9
3,352,138	-				-0.4
3,352,138	-				-1.4
3,352,138	-				-1.5
3,352,138	-				+0.3
3,352,138	-				+1.2
3,352,138	-				-0.5
3,352,138	-				-1.4
3,352,138	-				-2.3
3,352,138	-				+0.5
3,352,138	-				-0.3
3,352,207	+				+0.3
3,352,207	+				+1.4
3,352,207	+				-0.1
3,352,208	-				+0.6
3,352,208	-				+0.1
3,352,208	-				-1.6
3,352,208	-				+0.4
3,352,231	+				-0.4
3,352,231	+				+1.1
3,352,231	+				+0.5
3,352,231	+				-2.0
3,352,231	+				+0.4
3,352,231	+				-0.1
3,352,231	+				-0.1
3,352,231	+				+0.3
3,352,232	-				+1.4
3,352,232	-				-0.6
3,352,232	-				-0.4
3,352,232	-				+0.0
3,352,232	-				-0.3
3,352,232	-				-1.3
3,352,232	-				+1.1
3,352,232	-				-0.3
3,352,234	+				+1.7
3,352,234	+				-1.8
3,352,234	+				+1.4
3,352,234	+				+0.6
3,352,234	+				+0.0
3,352,234	+				+0.6
3,352,234	+				-1.5
3,352,234	+				+0.4
3,352,234	+				+0.0
3,352,235	-				+0.2
3,352,235	-				+0.6
3,352,256	+				-1.9
3,352,267	-				-0.4
3,352,369	+		EFB2_03191	0.12	-1.1
3,352,369	+		EFB2_03191	0.12	-1.0
3,352,369	+		EFB2_03191	0.12	-0.0
3,352,369	+		EFB2_03191	0.12	-0.2
3,352,370	-		EFB2_03191	0.12	-0.0
3,352,370	-		EFB2_03191	0.12	-1.3
3,352,370	-		EFB2_03191	0.12	-1.7
3,352,370	-		EFB2_03191	0.12	-1.8
3,352,471	+		EFB2_03191	0.22	+1.5
3,352,471	+		EFB2_03191	0.22	+0.3
3,352,471	+		EFB2_03191	0.22	+0.7
3,352,471	+		EFB2_03191	0.22	-0.4
3,352,471	+		EFB2_03191	0.22	-1.5
3,352,471	+		EFB2_03191	0.22	+1.9
3,352,471	+		EFB2_03191	0.22	+0.5
3,352,471	+		EFB2_03191	0.22	-2.4
3,352,471	+		EFB2_03191	0.22	+0.7
3,352,471	+		EFB2_03191	0.22	+0.3
3,352,471	+		EFB2_03191	0.22	-0.9
3,352,472	-		EFB2_03191	0.23	-2.7
3,352,472	-		EFB2_03191	0.23	-1.0
3,352,472	-		EFB2_03191	0.23	-3.1
3,352,472	-		EFB2_03191	0.23	+0.2
3,352,472	-		EFB2_03191	0.23	+0.1
3,352,472	-		EFB2_03191	0.23	-0.7
3,352,472	-		EFB2_03191	0.23	+0.2
3,352,472	-		EFB2_03191	0.23	-1.0
3,352,472	-		EFB2_03191	0.23	+0.1
3,352,472	-		EFB2_03191	0.23	+0.3
3,352,472	-		EFB2_03191	0.23	+1.8
3,352,472	-		EFB2_03191	0.23	-2.0
3,352,472	-		EFB2_03191	0.23	+1.3
3,352,472	-		EFB2_03191	0.23	+0.2
3,352,472	-		EFB2_03191	0.23	+0.6
3,352,472	-		EFB2_03191	0.23	-1.2
3,352,472	-		EFB2_03191	0.23	+0.2
3,352,472	-		EFB2_03191	0.23	-2.4
3,352,472	-		EFB2_03191	0.23	+0.5
3,352,472	-		EFB2_03191	0.23	-0.6
3,352,472	-		EFB2_03191	0.23	-0.7
3,352,473	+		EFB2_03191	0.23	+0.2
3,352,474	-		EFB2_03191	0.23	+0.2
3,352,474	-		EFB2_03191	0.23	-0.2
3,352,474	-		EFB2_03191	0.23	+0.6
3,352,474	-		EFB2_03191	0.23	-2.0
3,352,474	-		EFB2_03191	0.23	-0.2
3,352,494	+		EFB2_03191	0.25	+0.0
3,352,494	+		EFB2_03191	0.25	-0.3
3,352,494	+		EFB2_03191	0.25	-3.2
3,352,494	+		EFB2_03191	0.25	-0.7
3,352,494	+		EFB2_03191	0.25	+0.1
3,352,494	+		EFB2_03191	0.25	-0.6
3,352,494	+		EFB2_03191	0.25	-0.0
3,352,494	+		EFB2_03191	0.25	+0.4
3,352,494	+		EFB2_03191	0.25	+0.1
3,352,495	-		EFB2_03191	0.25	+0.1
3,352,495	-		EFB2_03191	0.25	-0.0
3,352,495	-		EFB2_03191	0.25	+1.6
3,352,495	-		EFB2_03191	0.25	+0.6
3,352,495	-		EFB2_03191	0.25	+0.3
3,352,495	-		EFB2_03191	0.25	+0.8
3,352,495	-		EFB2_03191	0.25	+0.3
3,352,495	-		EFB2_03191	0.25	+1.0
3,352,495	-		EFB2_03191	0.25	-2.2
3,352,495	-		EFB2_03191	0.25	+1.4
3,352,498	+		EFB2_03191	0.25	-1.6
3,352,498	+		EFB2_03191	0.25	+2.7
3,352,498	+		EFB2_03191	0.25	-1.5
3,352,498	+		EFB2_03191	0.25	-2.1
3,352,498	+		EFB2_03191	0.25	-0.2
3,352,498	+		EFB2_03191	0.25	+1.1
3,352,498	+		EFB2_03191	0.25	-0.9
3,352,498	+		EFB2_03191	0.25	+0.4
3,352,498	+		EFB2_03191	0.25	+1.0
3,352,498	+		EFB2_03191	0.25	-0.2
3,352,498	+		EFB2_03191	0.25	+0.6
3,352,498	+		EFB2_03191	0.25	-2.3
3,352,498	+		EFB2_03191	0.25	-0.0
3,352,498	+		EFB2_03191	0.25	+1.1
3,352,498	+		EFB2_03191	0.25	+2.2
3,352,498	+		EFB2_03191	0.25	+0.9
3,352,498	+		EFB2_03191	0.25	+0.3
3,352,498	+		EFB2_03191	0.25	-1.1
3,352,498	+		EFB2_03191	0.25	-1.8
3,352,498	+		EFB2_03191	0.25	+1.6
3,352,498	+		EFB2_03191	0.25	+0.4
3,352,499	-		EFB2_03191	0.25	-0.2
3,352,499	-		EFB2_03191	0.25	-0.8
3,352,499	-		EFB2_03191	0.25	-0.1
3,352,499	-		EFB2_03191	0.25	+0.3
3,352,499	-		EFB2_03191	0.25	-1.1
3,352,499	-		EFB2_03191	0.25	+0.6
3,352,499	-		EFB2_03191	0.25	-0.1
3,352,499	-		EFB2_03191	0.25	-2.2
3,352,499	-		EFB2_03191	0.25	-2.4
3,352,499	-		EFB2_03191	0.25	+1.5
3,352,499	-		EFB2_03191	0.25	+1.0
3,352,499	-		EFB2_03191	0.25	-0.3
3,352,499	-		EFB2_03191	0.25	+2.2
3,352,499	-		EFB2_03191	0.25	-0.4
3,352,499	-		EFB2_03191	0.25	+1.9
3,352,537	-		EFB2_03191	0.29	-1.2
3,352,605	-		EFB2_03191	0.36	-0.6
3,352,617	+		EFB2_03191	0.37	-0.2
3,352,640	+		EFB2_03191	0.39	+0.8
3,352,641	-		EFB2_03191	0.39	-0.1
3,352,687	+		EFB2_03191	0.44	+1.6
3,352,687	+		EFB2_03191	0.44	+0.2
3,352,687	+		EFB2_03191	0.44	-3.1
3,352,688	-		EFB2_03191	0.44	+1.1
3,352,688	-		EFB2_03191	0.44	-1.7
3,352,688	-		EFB2_03191	0.44	-0.1
3,352,688	-		EFB2_03191	0.44	-2.3
3,352,688	-		EFB2_03191	0.44	+0.6
3,352,688	-		EFB2_03191	0.44	-2.4
3,352,691	+		EFB2_03191	0.44	+0.2
3,352,691	+		EFB2_03191	0.44	-0.4
3,352,691	+		EFB2_03191	0.44	+1.4
3,352,691	+		EFB2_03191	0.44	-1.0
3,352,691	+		EFB2_03191	0.44	-1.0
3,352,692	-		EFB2_03191	0.45	-1.3
3,352,692	-		EFB2_03191	0.45	-0.3
3,352,692	-		EFB2_03191	0.45	-2.4
3,352,759	-		EFB2_03191	0.51	-3.4
3,352,775	-		EFB2_03191	0.53	+0.0
3,352,804	+		EFB2_03191	0.56	+3.1
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