Strain Fitness in Escherichia fergusonii Becca around EFB2_02195

Experiment: BHIS no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with 14 member community plus Klebsiella pneumoniae
2,329,399	+				-1.1
2,329,399	+				+0.3
2,329,399	+				-2.4
2,329,399	+				-0.9
2,329,399	+				-2.1
2,329,400	-				-1.0
2,329,403	+				+0.2
2,329,403	+				-0.1
2,329,403	+				-2.4
2,329,403	+				-1.2
2,329,403	+				-1.0
2,329,404	-				+1.1
2,329,404	-				-1.1
2,329,404	-				-1.2
2,329,447	+				-1.0
2,329,447	+				+1.4
2,329,447	+				-2.2
2,329,448	-				-1.4
2,329,448	-				-0.1
2,329,448	-				+1.7
2,329,448	-				+0.8
2,329,448	-				+1.6
2,329,448	-				-0.0
2,329,453	+				+1.9
2,329,453	+				+0.2
2,329,453	+				+1.8
2,329,453	+				+3.4
2,329,453	+				+1.6
2,329,453	+				+0.2
2,329,502	+				-1.2
2,329,513	+				+0.7
2,329,523	+				-1.9
2,329,523	+				+0.2
2,329,523	+				+0.4
2,329,523	+				+0.0
2,329,524	-				-0.2
2,329,524	-				+1.4
2,329,553	+		EFB2_02194	0.12	-0.2
2,329,553	+		EFB2_02194	0.12	+1.1
2,329,571	+		EFB2_02194	0.15	-3.1
2,329,571	+		EFB2_02194	0.15	+1.2
2,329,571	+		EFB2_02194	0.15	-1.9
2,329,571	+		EFB2_02194	0.15	+0.5
2,329,603	+		EFB2_02194	0.21	-2.1
2,329,603	+		EFB2_02194	0.21	+0.2
2,329,632	+		EFB2_02194	0.26	+0.0
2,329,632	+		EFB2_02194	0.26	-0.7
2,329,632	+		EFB2_02194	0.26	+0.7
2,329,632	+		EFB2_02194	0.26	-0.8
2,329,632	+		EFB2_02194	0.26	-1.0
2,329,632	+		EFB2_02194	0.26	-0.3
2,329,633	-		EFB2_02194	0.26	-0.0
2,329,633	-		EFB2_02194	0.26	-0.6
2,329,717	+		EFB2_02194	0.40	+1.5
2,329,717	+		EFB2_02194	0.40	-0.0
2,329,717	+		EFB2_02194	0.40	-3.7
2,329,774	-		EFB2_02194	0.50	+1.6
2,329,774	-		EFB2_02194	0.50	-0.8
2,329,774	-		EFB2_02194	0.50	-1.6
2,329,831	+		EFB2_02194	0.60	-1.6
2,329,831	+		EFB2_02194	0.60	+0.1
2,329,874	+		EFB2_02194	0.67	+1.5
2,329,874	+		EFB2_02194	0.67	-2.0
2,329,874	+		EFB2_02194	0.67	+0.8
2,329,875	-		EFB2_02194	0.68	-0.2
2,329,875	-		EFB2_02194	0.68	+1.1
2,329,883	+		EFB2_02194	0.69	+0.7
2,329,884	-		EFB2_02194	0.69	+2.4
2,329,884	-		EFB2_02194	0.69	+0.3
2,329,903	+		EFB2_02194	0.72	-2.1
2,329,903	+		EFB2_02194	0.72	+0.8
2,329,903	+		EFB2_02194	0.72	+2.4
2,329,927	+		EFB2_02194	0.76	+0.4
2,329,943	+		EFB2_02194	0.79	+1.7
2,329,944	-		EFB2_02194	0.79	-0.0
2,329,975	-		EFB2_02194	0.85	-1.1
2,329,996	-		EFB2_02194	0.88	+2.1
2,329,996	-		EFB2_02194	0.88	-0.3
2,330,019	+				+2.9
2,330,019	+				+1.6
2,330,019	+				+0.2
2,330,019	+				-0.6
2,330,019	+				+0.5
2,330,019	+				+1.3
2,330,019	+				-0.4
2,330,020	-				-2.0
2,330,020	-				+0.6
2,330,020	-				-0.6
2,330,021	+				-2.3
2,330,041	+				-0.8
2,330,139	+				-0.5
2,330,139	+				-3.1
2,330,139	+				-2.0
2,330,140	-				-2.0
2,330,140	-				+0.1
2,330,140	-				+0.5
2,330,170	+				+0.8
2,330,170	+				-0.1
2,330,170	+				-0.8
2,330,170	+				+0.1
2,330,171	-				-0.4
2,330,171	-				-2.6
2,330,174	+				-1.6
2,330,174	+				-1.5
2,330,174	+				-2.6
2,330,174	+				-0.9
2,330,175	-				-0.6
2,330,175	-				-0.0
2,330,198	+				+1.5
2,330,255	+				-1.4
2,330,344	+				-0.1
2,330,344	+				-0.6
2,330,344	+				-0.3
2,330,345	-				-0.6
2,330,348	+				-2.4
2,330,348	+				+1.4
2,330,348	+				-2.2
2,330,348	+				+0.2
2,330,348	+				+0.6
2,330,348	+				-0.6
2,330,348	+				+1.8
2,330,348	+				+2.6
2,330,348	+				-0.9
2,330,348	+				+2.7
2,330,348	+				-1.0
2,330,348	+				+1.0
2,330,348	+				+2.6
2,330,348	+				-2.0
2,330,349	-				+0.7
2,330,349	-				+1.2
2,330,349	-				-1.6
2,330,349	-				+1.4
2,330,349	-				-0.8
2,330,400	-				+0.1
2,330,457	+		EFB2_02195	0.13	+2.1
2,330,457	+		EFB2_02195	0.13	+0.6
2,330,513	+		EFB2_02195	0.16	-0.1
2,330,513	+		EFB2_02195	0.16	-1.8
2,330,518	+		EFB2_02195	0.16	+1.0
2,330,518	+		EFB2_02195	0.16	-2.1
2,330,518	+		EFB2_02195	0.16	+1.7
2,330,518	+		EFB2_02195	0.16	-1.2
2,330,572	+		EFB2_02195	0.20	+1.4
2,330,589	+		EFB2_02195	0.21	+0.8
2,330,589	+		EFB2_02195	0.21	+0.6
2,330,589	+		EFB2_02195	0.21	-2.3
2,330,589	+		EFB2_02195	0.21	+0.8
2,330,589	+		EFB2_02195	0.21	-2.8
2,330,589	+		EFB2_02195	0.21	-0.1
2,330,589	+		EFB2_02195	0.21	+1.0
2,330,589	+		EFB2_02195	0.21	-1.8
2,330,589	+		EFB2_02195	0.21	+1.2
2,330,589	+		EFB2_02195	0.21	-0.0
2,330,589	+		EFB2_02195	0.21	+0.9
2,330,590	-		EFB2_02195	0.21	-0.0
2,330,590	-		EFB2_02195	0.21	-0.6
2,330,591	+		EFB2_02195	0.21	+0.2
2,330,591	+		EFB2_02195	0.21	+2.0
2,330,619	-		EFB2_02195	0.22	-0.6
2,330,619	-		EFB2_02195	0.22	+0.9
2,330,687	+		EFB2_02195	0.26	+1.4
2,330,687	+		EFB2_02195	0.26	+1.2
2,330,687	+		EFB2_02195	0.26	-1.0
2,330,688	-		EFB2_02195	0.26	-2.3
2,330,708	+		EFB2_02195	0.28	-1.5
2,330,720	+		EFB2_02195	0.28	+2.1
2,330,734	+		EFB2_02195	0.29	+0.6
2,330,734	+		EFB2_02195	0.29	+0.7
2,330,734	+		EFB2_02195	0.29	+2.6
2,330,734	+		EFB2_02195	0.29	+1.6
2,330,738	+		EFB2_02195	0.29	-0.2
2,330,739	-		EFB2_02195	0.29	+1.0
2,330,756	-		EFB2_02195	0.30	-0.8
2,330,771	+		EFB2_02195	0.31	-0.6
2,330,775	+		EFB2_02195	0.31	-0.8
2,330,775	+		EFB2_02195	0.31	-0.8
2,330,775	+		EFB2_02195	0.31	-1.8
2,330,775	+		EFB2_02195	0.31	-0.0
2,330,775	+		EFB2_02195	0.31	+1.3
2,330,775	+		EFB2_02195	0.31	+0.6
2,330,775	+		EFB2_02195	0.31	+3.0
2,330,775	+		EFB2_02195	0.31	-1.4
2,330,775	+		EFB2_02195	0.31	+0.8
2,330,775	+		EFB2_02195	0.31	-0.1
2,330,775	+		EFB2_02195	0.31	+1.5
2,330,775	+		EFB2_02195	0.31	+0.8
2,330,776	-		EFB2_02195	0.31	-2.0
2,330,776	-		EFB2_02195	0.31	-1.5
2,330,776	-		EFB2_02195	0.31	-0.4
2,330,776	-		EFB2_02195	0.31	+0.5
2,330,776	-		EFB2_02195	0.31	-0.6
2,330,776	-		EFB2_02195	0.31	-0.6
2,330,776	-		EFB2_02195	0.31	-2.0
2,330,799	+		EFB2_02195	0.33	+2.2
2,330,799	+		EFB2_02195	0.33	+0.1
2,330,800	-		EFB2_02195	0.33	+2.1
2,330,859	+		EFB2_02195	0.36	+3.2
2,330,859	+		EFB2_02195	0.36	+1.0
2,330,860	-		EFB2_02195	0.36	-0.3
2,330,860	-		EFB2_02195	0.36	-2.0
2,330,860	-		EFB2_02195	0.36	+2.2
2,330,890	+		EFB2_02195	0.38	-0.8
2,330,904	+		EFB2_02195	0.39	-1.0
2,330,904	+		EFB2_02195	0.39	+1.1
2,330,905	-		EFB2_02195	0.39	+0.6
2,330,957	+		EFB2_02195	0.42	-0.0
2,330,957	+		EFB2_02195	0.42	+0.2
2,330,957	+		EFB2_02195	0.42	-2.0
2,330,957	+		EFB2_02195	0.42	-0.3
2,330,957	+		EFB2_02195	0.42	+1.3
2,330,958	-		EFB2_02195	0.42	-0.2
2,330,991	+		EFB2_02195	0.44	-0.8
2,330,991	+		EFB2_02195	0.44	-0.3
2,330,991	+		EFB2_02195	0.44	+0.8
2,330,991	+		EFB2_02195	0.44	+0.4
2,330,991	+		EFB2_02195	0.44	+0.3
2,330,991	+		EFB2_02195	0.44	+0.8
2,330,991	+		EFB2_02195	0.44	+1.6
2,330,991	+		EFB2_02195	0.44	+1.3
2,330,991	+		EFB2_02195	0.44	+2.6
2,330,991	+		EFB2_02195	0.44	+2.3
2,330,992	-		EFB2_02195	0.44	+1.5
2,330,992	-		EFB2_02195	0.44	-0.9
2,330,992	-		EFB2_02195	0.44	+0.2
2,330,992	-		EFB2_02195	0.44	-0.8
2,330,992	-		EFB2_02195	0.44	-2.8
2,330,992	-		EFB2_02195	0.44	+0.9
2,330,992	-		EFB2_02195	0.44	+1.5
2,331,046	-		EFB2_02195	0.47	+1.2
2,331,068	+		EFB2_02195	0.48	+2.8
2,331,068	+		EFB2_02195	0.48	-0.6
2,331,069	-		EFB2_02195	0.49	+1.7
2,331,110	+		EFB2_02195	0.51	+0.2
2,331,110	+		EFB2_02195	0.51	-0.2
2,331,110	+		EFB2_02195	0.51	+1.2
2,331,110	+		EFB2_02195	0.51	-0.2
2,331,111	-		EFB2_02195	0.51	-0.6
2,331,167	+		EFB2_02195	0.54	-1.0
2,331,216	-		EFB2_02195	0.57	+0.9
2,331,321	+		EFB2_02195	0.63	+1.2
2,331,321	+		EFB2_02195	0.63	+2.8
2,331,322	-		EFB2_02195	0.63	-0.2
2,331,378	+		EFB2_02195	0.66	+1.0
2,331,379	-		EFB2_02195	0.67	+0.2
2,331,383	+		EFB2_02195	0.67	-2.6
2,331,384	-		EFB2_02195	0.67	-2.3
2,331,455	+		EFB2_02195	0.71	+0.0
2,331,463	+		EFB2_02195	0.71	-0.2
2,331,463	+		EFB2_02195	0.71	-1.6
2,331,463	+		EFB2_02195	0.71	+0.3
2,331,463	+		EFB2_02195	0.71	+1.2
2,331,463	+		EFB2_02195	0.71	-1.8
2,331,464	-		EFB2_02195	0.71	-1.0
2,331,539	+		EFB2_02195	0.76	+2.1
2,331,568	+		EFB2_02195	0.78	+1.1
2,331,656	+		EFB2_02195	0.83	-0.7
2,331,656	+		EFB2_02195	0.83	-1.4
2,331,663	+		EFB2_02195	0.83	+2.2
2,331,706	+		EFB2_02195	0.86	-0.6
2,331,706	+		EFB2_02195	0.86	+0.4
2,331,730	+		EFB2_02195	0.87	+0.1
2,331,730	+		EFB2_02195	0.87	+2.1
2,331,730	+		EFB2_02195	0.87	+0.4
2,331,837	+				+1.5
2,331,837	+				-2.2
2,331,874	+				+0.3
2,331,884	+				+1.1
2,331,913	+				+0.2
2,331,913	+				+2.9
2,331,913	+				+0.5
2,331,913	+				-0.4
2,331,914	-				-0.0
2,331,944	+				-1.0
2,331,944	+				-1.8
2,331,944	+				-0.0
2,331,944	+				+1.2
2,331,945	-				+1.0
2,331,958	+				-0.5
2,331,958	+				-0.2
2,331,958	+				-0.5
2,331,958	+				-1.3
2,332,009	-				+2.6
2,332,017	+				-0.6
2,332,017	+				+0.8
2,332,017	+				-2.5
2,332,017	+				-2.0
2,332,018	-				+0.6
2,332,018	-				+0.3
2,332,041	-				-0.0
2,332,041	-				+0.7
2,332,041	-				+1.4
2,332,121	+				+1.4
2,332,122	-				+0.7
2,332,131	+				+1.1
2,332,131	+				-1.3
2,332,131	+				+1.2
2,332,132	-				+0.2
2,332,132	-				+1.2
2,332,132	-				+0.3
2,332,132	-				-1.1
2,332,132	-				-1.1
2,332,132	-				+1.9
2,332,132	-				-2.2
2,332,132	-				-1.1
2,332,132	-				+0.7
2,332,132	-				-0.3
2,332,150	+		EFB2_02196	0.10	-1.0
2,332,151	-		EFB2_02196	0.10	+2.4
2,332,151	-		EFB2_02196	0.10	+3.6
2,332,151	-		EFB2_02196	0.10	-0.4
2,332,268	+		EFB2_02196	0.21	+1.7
2,332,268	+		EFB2_02196	0.21	-0.8
2,332,268	+		EFB2_02196	0.21	-3.1
2,332,309	+		EFB2_02196	0.25	+0.3
2,332,395	+		EFB2_02196	0.32	-0.8
2,332,395	+		EFB2_02196	0.32	-2.2
2,332,395	+		EFB2_02196	0.32	-0.6
2,332,395	+		EFB2_02196	0.32	+1.2
2,332,396	-		EFB2_02196	0.32	+1.4
2,332,396	-		EFB2_02196	0.32	-0.2
2,332,396	-		EFB2_02196	0.32	-0.1
2,332,396	-		EFB2_02196	0.32	+2.4
2,332,473	+		EFB2_02196	0.39	-1.0
2,332,473	+		EFB2_02196	0.39	+0.2
2,332,473	+		EFB2_02196	0.39	+0.0
2,332,473	+		EFB2_02196	0.39	-0.6
2,332,474	-		EFB2_02196	0.39	+1.0
2,332,474	-		EFB2_02196	0.39	+1.8
2,332,474	-		EFB2_02196	0.39	+0.2
2,332,494	+		EFB2_02196	0.41	-2.8
2,332,495	-		EFB2_02196	0.41	+0.3
2,332,495	-		EFB2_02196	0.41	-1.2
2,332,520	+		EFB2_02196	0.43	-1.8
2,332,520	+		EFB2_02196	0.43	-1.5
2,332,520	+		EFB2_02196	0.43	-1.1
2,332,520	+		EFB2_02196	0.43	-1.2
2,332,520	+		EFB2_02196	0.43	-1.9
2,332,521	-		EFB2_02196	0.44	-1.5
2,332,521	-		EFB2_02196	0.44	+0.2
2,332,521	-		EFB2_02196	0.44	+0.5
2,332,550	-		EFB2_02196	0.46	+1.6
2,332,550	-		EFB2_02196	0.46	+0.9
2,332,628	+		EFB2_02196	0.53	+2.6
2,332,629	-		EFB2_02196	0.53	+1.8
2,332,649	-		EFB2_02196	0.55	-2.0
2,332,649	-		EFB2_02196	0.55	-3.3
2,332,770	+		EFB2_02196	0.66	-0.2
2,332,770	+		EFB2_02196	0.66	-2.1
2,332,770	+		EFB2_02196	0.66	-0.5
2,332,770	+		EFB2_02196	0.66	+0.2
2,332,771	-		EFB2_02196	0.66	+0.2
2,332,771	-		EFB2_02196	0.66	+3.8
2,332,771	-		EFB2_02196	0.66	-0.0
2,332,771	-		EFB2_02196	0.66	-0.9
2,332,771	-		EFB2_02196	0.66	+0.2
2,332,772	+		EFB2_02196	0.66	+0.3
2,332,772	+		EFB2_02196	0.66	+0.6
2,332,772	+		EFB2_02196	0.66	+1.4
2,332,773	-		EFB2_02196	0.66	-0.9
2,332,773	-		EFB2_02196	0.66	-2.3
2,332,773	-		EFB2_02196	0.66	-0.0
2,332,773	-		EFB2_02196	0.66	+1.6
2,332,839	-		EFB2_02196	0.72	+1.4
2,332,907	+		EFB2_02196	0.78	+0.3
2,332,935	-		EFB2_02196	0.81	-0.2
2,332,935	-		EFB2_02196	0.81	-0.3
2,332,935	-		EFB2_02196	0.81	+1.6
2,332,953	-		EFB2_02196	0.82	-0.8