Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03021

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03020 and MPMX26_03021 overlap by 4 nucleotidesMPMX26_03021 and MPMX26_03022 are separated by 23 nucleotidesMPMX26_03022 and MPMX26_03023 are separated by 89 nucleotides MPMX26_03020: MPMX26_03020 - Methionyl-tRNA formyltransferase, at 3,139,029 to 3,139,991 _03020 MPMX26_03021: MPMX26_03021 - Ribosomal RNA small subunit methyltransferase B, at 3,139,988 to 3,141,295 _03021 MPMX26_03022: MPMX26_03022 - Zinc transporter ZupT, at 3,141,319 to 3,142,128 _03022 MPMX26_03023: MPMX26_03023 - hypothetical protein, at 3,142,218 to 3,142,346 _03023 Position (kb) 3139 3140 3141 3142Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3139.931 kb on + strandat 3139.992 kb on + strandat 3139.992 kb on + strandat 3140.010 kb on + strandat 3140.010 kb on + strandat 3140.020 kb on + strandat 3140.031 kb on + strandat 3140.036 kb on + strandat 3140.036 kb on + strandat 3140.038 kb on + strandat 3140.055 kb on + strandat 3140.055 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.057 kb on + strandat 3140.063 kb on - strandat 3140.065 kb on + strandat 3140.065 kb on + strandat 3140.066 kb on + strandat 3140.073 kb on + strandat 3140.085 kb on + strandat 3140.126 kb on + strand, within MPMX26_03021at 3140.140 kb on + strand, within MPMX26_03021at 3140.140 kb on + strand, within MPMX26_03021at 3140.171 kb on + strand, within MPMX26_03021at 3140.172 kb on + strand, within MPMX26_03021at 3140.207 kb on + strand, within MPMX26_03021at 3140.212 kb on + strand, within MPMX26_03021at 3140.212 kb on + strand, within MPMX26_03021at 3140.212 kb on + strand, within MPMX26_03021at 3140.225 kb on + strand, within MPMX26_03021at 3140.225 kb on + strand, within MPMX26_03021at 3140.239 kb on + strand, within MPMX26_03021at 3140.246 kb on + strand, within MPMX26_03021at 3140.253 kb on + strand, within MPMX26_03021at 3140.305 kb on + strand, within MPMX26_03021at 3140.320 kb on + strand, within MPMX26_03021at 3140.325 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.400 kb on + strand, within MPMX26_03021at 3140.434 kb on + strand, within MPMX26_03021at 3140.446 kb on + strand, within MPMX26_03021at 3140.446 kb on + strand, within MPMX26_03021at 3140.446 kb on + strand, within MPMX26_03021at 3140.446 kb on + strand, within MPMX26_03021at 3140.452 kb on + strand, within MPMX26_03021at 3140.452 kb on + strand, within MPMX26_03021at 3140.457 kb on + strand, within MPMX26_03021at 3140.457 kb on + strand, within MPMX26_03021at 3140.467 kb on + strand, within MPMX26_03021at 3140.487 kb on + strand, within MPMX26_03021at 3140.488 kb on + strand, within MPMX26_03021at 3140.501 kb on + strand, within MPMX26_03021at 3140.504 kb on + strand, within MPMX26_03021at 3140.527 kb on + strand, within MPMX26_03021at 3140.550 kb on + strand, within MPMX26_03021at 3140.597 kb on + strand, within MPMX26_03021at 3140.597 kb on + strand, within MPMX26_03021at 3140.597 kb on + strand, within MPMX26_03021at 3140.597 kb on + strand, within MPMX26_03021at 3140.610 kb on + strand, within MPMX26_03021at 3140.620 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.626 kb on + strand, within MPMX26_03021at 3140.652 kb on + strand, within MPMX26_03021at 3140.652 kb on + strand, within MPMX26_03021at 3140.680 kb on + strand, within MPMX26_03021at 3140.680 kb on + strand, within MPMX26_03021at 3140.680 kb on + strand, within MPMX26_03021at 3140.695 kb on + strand, within MPMX26_03021at 3140.695 kb on + strand, within MPMX26_03021at 3140.695 kb on + strand, within MPMX26_03021at 3140.700 kb on + strand, within MPMX26_03021at 3140.737 kb on + strand, within MPMX26_03021at 3140.738 kb on + strand, within MPMX26_03021at 3140.745 kb on + strand, within MPMX26_03021at 3140.748 kb on + strand, within MPMX26_03021at 3140.748 kb on + strand, within MPMX26_03021at 3140.748 kb on + strand, within MPMX26_03021at 3140.788 kb on + strand, within MPMX26_03021at 3140.788 kb on + strand, within MPMX26_03021at 3140.788 kb on + strand, within MPMX26_03021at 3140.798 kb on + strand, within MPMX26_03021at 3140.798 kb on + strand, within MPMX26_03021at 3140.816 kb on + strand, within MPMX26_03021at 3140.816 kb on + strand, within MPMX26_03021at 3140.816 kb on + strand, within MPMX26_03021at 3140.816 kb on + strand, within MPMX26_03021at 3140.862 kb on + strand, within MPMX26_03021at 3140.862 kb on + strand, within MPMX26_03021at 3140.862 kb on + strand, within MPMX26_03021at 3140.869 kb on + strand, within MPMX26_03021at 3140.890 kb on + strand, within MPMX26_03021at 3140.890 kb on + strand, within MPMX26_03021at 3140.890 kb on + strand, within MPMX26_03021at 3140.890 kb on + strand, within MPMX26_03021at 3140.904 kb on + strand, within MPMX26_03021at 3140.929 kb on + strand, within MPMX26_03021at 3141.013 kb on + strand, within MPMX26_03021at 3141.014 kb on + strand, within MPMX26_03021at 3141.033 kb on + strand, within MPMX26_03021at 3141.033 kb on + strand, within MPMX26_03021at 3141.075 kb on + strand, within MPMX26_03021at 3141.076 kb on + strand, within MPMX26_03021at 3141.076 kb on + strand, within MPMX26_03021at 3141.076 kb on + strand, within MPMX26_03021at 3141.076 kb on + strand, within MPMX26_03021at 3141.101 kb on + strand, within MPMX26_03021at 3141.146 kb on + strand, within MPMX26_03021at 3141.151 kb on + strand, within MPMX26_03021at 3141.151 kb on + strand, within MPMX26_03021at 3141.176 kb on + strandat 3141.187 kb on + strandat 3141.197 kb on + strandat 3141.197 kb on + strandat 3141.204 kb on + strandat 3141.209 kb on + strandat 3141.209 kb on + strandat 3141.209 kb on + strandat 3141.209 kb on + strandat 3141.214 kb on + strandat 3141.219 kb on + strandat 3141.324 kb on - strandat 3141.754 kb on + strand, within MPMX26_03022at 3141.999 kb on - strand, within MPMX26_03022at 3142.047 kb on - strand, within MPMX26_03022at 3142.049 kb on + strandat 3142.057 kb on - strandat 3142.203 kb on - strandat 3142.203 kb on - strandat 3142.233 kb on - strand, within MPMX26_03023

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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3,139,931 + -0.9
3,139,992 + +0.9
3,139,992 + +0.6
3,140,010 + +0.7
3,140,010 + -0.4
3,140,020 + -0.8
3,140,031 + +1.9
3,140,036 + -1.1
3,140,036 + -0.6
3,140,038 + +1.0
3,140,055 + +0.3
3,140,055 + -0.4
3,140,057 + -0.1
3,140,057 + -0.2
3,140,057 + -0.1
3,140,057 + -0.4
3,140,057 + -0.2
3,140,057 + +0.1
3,140,057 + +0.5
3,140,063 - -0.2
3,140,065 + -0.0
3,140,065 + -0.2
3,140,066 + -0.1
3,140,073 + -0.2
3,140,085 + -0.3
3,140,126 + MPMX26_03021 0.11 -0.6
3,140,140 + MPMX26_03021 0.12 -0.2
3,140,140 + MPMX26_03021 0.12 +0.2
3,140,171 + MPMX26_03021 0.14 -2.7
3,140,172 + MPMX26_03021 0.14 +0.5
3,140,207 + MPMX26_03021 0.17 -0.0
3,140,212 + MPMX26_03021 0.17 -0.1
3,140,212 + MPMX26_03021 0.17 -0.1
3,140,212 + MPMX26_03021 0.17 -0.8
3,140,225 + MPMX26_03021 0.18 -0.1
3,140,225 + MPMX26_03021 0.18 -0.3
3,140,239 + MPMX26_03021 0.19 +0.1
3,140,246 + MPMX26_03021 0.20 +0.3
3,140,253 + MPMX26_03021 0.20 -0.9
3,140,305 + MPMX26_03021 0.24 -0.1
3,140,320 + MPMX26_03021 0.25 +0.5
3,140,325 + MPMX26_03021 0.26 -0.4
3,140,400 + MPMX26_03021 0.31 -1.3
3,140,400 + MPMX26_03021 0.31 +0.3
3,140,400 + MPMX26_03021 0.31 +0.9
3,140,400 + MPMX26_03021 0.31 -0.0
3,140,400 + MPMX26_03021 0.31 +0.6
3,140,400 + MPMX26_03021 0.31 -0.7
3,140,434 + MPMX26_03021 0.34 +0.3
3,140,446 + MPMX26_03021 0.35 +0.0
3,140,446 + MPMX26_03021 0.35 +0.6
3,140,446 + MPMX26_03021 0.35 -0.1
3,140,446 + MPMX26_03021 0.35 -0.2
3,140,452 + MPMX26_03021 0.35 +0.1
3,140,452 + MPMX26_03021 0.35 -1.0
3,140,457 + MPMX26_03021 0.36 +0.1
3,140,457 + MPMX26_03021 0.36 -0.1
3,140,467 + MPMX26_03021 0.37 +0.3
3,140,487 + MPMX26_03021 0.38 -1.1
3,140,488 + MPMX26_03021 0.38 -0.2
3,140,501 + MPMX26_03021 0.39 +0.3
3,140,504 + MPMX26_03021 0.39 -0.2
3,140,527 + MPMX26_03021 0.41 +0.2
3,140,550 + MPMX26_03021 0.43 -0.8
3,140,597 + MPMX26_03021 0.47 -0.7
3,140,597 + MPMX26_03021 0.47 +1.0
3,140,597 + MPMX26_03021 0.47 +0.3
3,140,597 + MPMX26_03021 0.47 -0.2
3,140,610 + MPMX26_03021 0.48 -0.9
3,140,620 + MPMX26_03021 0.48 -1.1
3,140,626 + MPMX26_03021 0.49 -0.3
3,140,626 + MPMX26_03021 0.49 +0.1
3,140,626 + MPMX26_03021 0.49 -0.4
3,140,626 + MPMX26_03021 0.49 -0.3
3,140,626 + MPMX26_03021 0.49 -0.0
3,140,626 + MPMX26_03021 0.49 -0.2
3,140,626 + MPMX26_03021 0.49 +0.2
3,140,626 + MPMX26_03021 0.49 +0.2
3,140,626 + MPMX26_03021 0.49 -0.4
3,140,626 + MPMX26_03021 0.49 -0.2
3,140,626 + MPMX26_03021 0.49 -0.3
3,140,626 + MPMX26_03021 0.49 -0.3
3,140,626 + MPMX26_03021 0.49 +1.3
3,140,626 + MPMX26_03021 0.49 -0.2
3,140,626 + MPMX26_03021 0.49 -0.5
3,140,626 + MPMX26_03021 0.49 -0.0
3,140,626 + MPMX26_03021 0.49 -0.4
3,140,626 + MPMX26_03021 0.49 -0.3
3,140,652 + MPMX26_03021 0.51 -0.3
3,140,652 + MPMX26_03021 0.51 -0.8
3,140,680 + MPMX26_03021 0.53 -0.1
3,140,680 + MPMX26_03021 0.53 -0.2
3,140,680 + MPMX26_03021 0.53 +0.2
3,140,695 + MPMX26_03021 0.54 -0.0
3,140,695 + MPMX26_03021 0.54 -0.7
3,140,695 + MPMX26_03021 0.54 +0.1
3,140,700 + MPMX26_03021 0.54 +0.3
3,140,737 + MPMX26_03021 0.57 +0.3
3,140,738 + MPMX26_03021 0.57 +0.8
3,140,745 + MPMX26_03021 0.58 -0.9
3,140,748 + MPMX26_03021 0.58 -1.7
3,140,748 + MPMX26_03021 0.58 +0.5
3,140,748 + MPMX26_03021 0.58 +0.2
3,140,788 + MPMX26_03021 0.61 -0.6
3,140,788 + MPMX26_03021 0.61 -0.0
3,140,788 + MPMX26_03021 0.61 -1.0
3,140,798 + MPMX26_03021 0.62 -0.4
3,140,798 + MPMX26_03021 0.62 -0.5
3,140,816 + MPMX26_03021 0.63 +0.3
3,140,816 + MPMX26_03021 0.63 -0.2
3,140,816 + MPMX26_03021 0.63 -0.1
3,140,816 + MPMX26_03021 0.63 +0.2
3,140,862 + MPMX26_03021 0.67 +0.4
3,140,862 + MPMX26_03021 0.67 +0.4
3,140,862 + MPMX26_03021 0.67 +0.3
3,140,869 + MPMX26_03021 0.67 -0.8
3,140,890 + MPMX26_03021 0.69 -0.4
3,140,890 + MPMX26_03021 0.69 +0.5
3,140,890 + MPMX26_03021 0.69 -1.1
3,140,890 + MPMX26_03021 0.69 +0.3
3,140,904 + MPMX26_03021 0.70 -0.3
3,140,929 + MPMX26_03021 0.72 +0.2
3,141,013 + MPMX26_03021 0.78 +0.2
3,141,014 + MPMX26_03021 0.78 -0.4
3,141,033 + MPMX26_03021 0.80 -2.9
3,141,033 + MPMX26_03021 0.80 +1.1
3,141,075 + MPMX26_03021 0.83 +0.0
3,141,076 + MPMX26_03021 0.83 -0.2
3,141,076 + MPMX26_03021 0.83 -0.0
3,141,076 + MPMX26_03021 0.83 -0.0
3,141,076 + MPMX26_03021 0.83 -0.5
3,141,101 + MPMX26_03021 0.85 -0.7
3,141,146 + MPMX26_03021 0.89 +0.1
3,141,151 + MPMX26_03021 0.89 -0.0
3,141,151 + MPMX26_03021 0.89 -0.1
3,141,176 + -0.3
3,141,187 + -0.0
3,141,197 + -0.0
3,141,197 + +0.9
3,141,204 + +1.7
3,141,209 + -0.2
3,141,209 + -0.3
3,141,209 + -0.2
3,141,209 + -1.4
3,141,214 + -0.2
3,141,219 + -0.9
3,141,324 - +1.1
3,141,754 + MPMX26_03022 0.54 -0.4
3,141,999 - MPMX26_03022 0.84 +0.9
3,142,047 - MPMX26_03022 0.90 +0.8
3,142,049 + -0.7
3,142,057 - +0.3
3,142,203 - -0.2
3,142,203 - -0.6
3,142,233 - MPMX26_03023 0.12 +0.3

Or see this region's nucleotide sequence