Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02962 and MPMX26_02963 are separated by 172 nucleotides MPMX26_02963 and MPMX26_02964 are separated by 140 nucleotides MPMX26_02964 and MPMX26_02965 are separated by 200 nucleotides MPMX26_02965 and MPMX26_02966 are separated by 51 nucleotides
MPMX26_02962: MPMX26_02962 - Nicotinate phosphoribosyltransferase 2, at 3,077,798 to 3,079,006
_02962
MPMX26_02963: MPMX26_02963 - hypothetical protein, at 3,079,179 to 3,079,664
_02963
MPMX26_02964: MPMX26_02964 - Catalase, at 3,079,805 to 3,081,325
_02964
MPMX26_02965: MPMX26_02965 - D-aminoacyl-tRNA deacylase, at 3,081,526 to 3,081,966
_02965
MPMX26_02966: MPMX26_02966 - hypothetical protein, at 3,082,018 to 3,082,497
_02966
Position (kb)
3079
3080
3081
3082 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3078.858 kb on - strand, within MPMX26_02962 at 3078.879 kb on - strand, within MPMX26_02962 at 3078.882 kb on - strand, within MPMX26_02962 at 3078.887 kb on - strand at 3078.943 kb on - strand at 3078.954 kb on - strand at 3078.977 kb on + strand at 3079.212 kb on - strand at 3079.340 kb on - strand, within MPMX26_02963 at 3079.340 kb on - strand, within MPMX26_02963 at 3079.340 kb on - strand, within MPMX26_02963 at 3079.364 kb on - strand, within MPMX26_02963 at 3079.448 kb on - strand, within MPMX26_02963 at 3079.580 kb on - strand, within MPMX26_02963 at 3079.593 kb on - strand, within MPMX26_02963 at 3079.613 kb on - strand, within MPMX26_02963 at 3079.615 kb on - strand, within MPMX26_02963 at 3079.615 kb on - strand, within MPMX26_02963 at 3079.712 kb on + strand at 3079.743 kb on + strand at 3079.745 kb on + strand at 3079.758 kb on - strand at 3079.758 kb on - strand at 3079.765 kb on + strand at 3079.765 kb on + strand at 3079.781 kb on - strand at 3079.790 kb on + strand at 3079.790 kb on - strand at 3079.793 kb on - strand at 3079.793 kb on - strand at 3079.798 kb on - strand at 3079.798 kb on - strand at 3079.798 kb on - strand at 3079.816 kb on - strand at 3079.816 kb on - strand at 3079.816 kb on - strand at 3079.829 kb on + strand at 3079.870 kb on + strand at 3079.873 kb on + strand at 3079.873 kb on - strand at 3079.873 kb on - strand at 3079.873 kb on - strand at 3079.875 kb on + strand at 3079.878 kb on - strand at 3079.878 kb on - strand at 3079.878 kb on - strand at 3079.878 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.883 kb on - strand at 3079.885 kb on - strand at 3079.888 kb on - strand at 3079.907 kb on + strand at 3079.910 kb on - strand at 3079.998 kb on - strand, within MPMX26_02964 at 3080.003 kb on - strand, within MPMX26_02964 at 3080.017 kb on - strand, within MPMX26_02964 at 3080.017 kb on - strand, within MPMX26_02964 at 3080.023 kb on + strand, within MPMX26_02964 at 3080.031 kb on - strand, within MPMX26_02964 at 3080.031 kb on - strand, within MPMX26_02964 at 3080.054 kb on + strand, within MPMX26_02964 at 3080.062 kb on - strand, within MPMX26_02964 at 3080.062 kb on - strand, within MPMX26_02964 at 3080.062 kb on - strand, within MPMX26_02964 at 3080.064 kb on - strand, within MPMX26_02964 at 3080.086 kb on - strand, within MPMX26_02964 at 3080.096 kb on - strand, within MPMX26_02964 at 3080.096 kb on - strand, within MPMX26_02964 at 3080.096 kb on - strand, within MPMX26_02964 at 3080.096 kb on - strand, within MPMX26_02964 at 3080.096 kb on - strand, within MPMX26_02964 at 3080.101 kb on - strand, within MPMX26_02964 at 3080.138 kb on - strand, within MPMX26_02964 at 3080.146 kb on - strand, within MPMX26_02964 at 3080.196 kb on + strand, within MPMX26_02964 at 3080.221 kb on - strand, within MPMX26_02964 at 3080.247 kb on + strand, within MPMX26_02964 at 3080.285 kb on + strand, within MPMX26_02964 at 3080.323 kb on - strand, within MPMX26_02964 at 3080.333 kb on - strand, within MPMX26_02964 at 3080.387 kb on - strand, within MPMX26_02964 at 3080.425 kb on - strand, within MPMX26_02964 at 3080.611 kb on - strand, within MPMX26_02964 at 3080.611 kb on - strand, within MPMX26_02964 at 3080.667 kb on + strand, within MPMX26_02964 at 3080.667 kb on + strand, within MPMX26_02964 at 3080.677 kb on + strand, within MPMX26_02964 at 3080.747 kb on - strand, within MPMX26_02964 at 3080.797 kb on - strand, within MPMX26_02964 at 3080.809 kb on - strand, within MPMX26_02964 at 3080.835 kb on - strand, within MPMX26_02964 at 3080.941 kb on + strand, within MPMX26_02964 at 3080.941 kb on + strand, within MPMX26_02964 at 3080.941 kb on + strand, within MPMX26_02964 at 3080.941 kb on + strand, within MPMX26_02964 at 3080.949 kb on - strand, within MPMX26_02964 at 3080.949 kb on - strand, within MPMX26_02964 at 3080.998 kb on - strand, within MPMX26_02964 at 3081.041 kb on - strand, within MPMX26_02964 at 3081.097 kb on + strand, within MPMX26_02964 at 3081.097 kb on + strand, within MPMX26_02964 at 3081.097 kb on + strand, within MPMX26_02964 at 3081.105 kb on - strand, within MPMX26_02964 at 3081.107 kb on - strand, within MPMX26_02964 at 3081.107 kb on - strand, within MPMX26_02964 at 3081.175 kb on - strand at 3081.205 kb on - strand at 3081.238 kb on - strand at 3081.291 kb on - strand at 3081.291 kb on - strand at 3081.293 kb on - strand at 3081.293 kb on - strand at 3081.293 kb on - strand at 3081.305 kb on - strand at 3081.323 kb on - strand at 3081.367 kb on - strand at 3081.497 kb on + strand at 3081.535 kb on + strand at 3081.535 kb on + strand at 3081.543 kb on + strand at 3081.631 kb on + strand, within MPMX26_02965 at 3081.642 kb on + strand, within MPMX26_02965 at 3081.642 kb on + strand, within MPMX26_02965 at 3081.642 kb on + strand, within MPMX26_02965 at 3081.650 kb on - strand, within MPMX26_02965 at 3081.650 kb on - strand, within MPMX26_02965 at 3081.702 kb on + strand, within MPMX26_02965 at 3081.729 kb on + strand, within MPMX26_02965 at 3081.729 kb on + strand, within MPMX26_02965 at 3081.772 kb on + strand, within MPMX26_02965 at 3081.801 kb on + strand, within MPMX26_02965 at 3081.801 kb on + strand, within MPMX26_02965 at 3081.867 kb on + strand, within MPMX26_02965 at 3081.873 kb on + strand, within MPMX26_02965 at 3081.873 kb on + strand, within MPMX26_02965 at 3081.873 kb on + strand, within MPMX26_02965 at 3081.916 kb on + strand, within MPMX26_02965 at 3081.944 kb on + strand at 3082.013 kb on - strand at 3082.094 kb on - strand, within MPMX26_02966 at 3082.109 kb on - strand, within MPMX26_02966 at 3082.121 kb on - strand, within MPMX26_02966 at 3082.121 kb on - strand, within MPMX26_02966 at 3082.121 kb on - strand, within MPMX26_02966 at 3082.121 kb on - strand, within MPMX26_02966 at 3082.126 kb on - strand, within MPMX26_02966 at 3082.126 kb on - strand, within MPMX26_02966 at 3082.140 kb on - strand, within MPMX26_02966 at 3082.178 kb on - strand, within MPMX26_02966 at 3082.185 kb on - strand, within MPMX26_02966 at 3082.199 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.204 kb on - strand, within MPMX26_02966 at 3082.216 kb on - strand, within MPMX26_02966 at 3082.217 kb on - strand, within MPMX26_02966 at 3082.218 kb on - strand, within MPMX26_02966 at 3082.285 kb on - strand, within MPMX26_02966 at 3082.285 kb on - strand, within MPMX26_02966 at 3082.318 kb on + strand, within MPMX26_02966
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 3,078,858 - MPMX26_02962 0.88 -0.8 3,078,879 - MPMX26_02962 0.89 -0.7 3,078,882 - MPMX26_02962 0.90 -1.6 3,078,887 - -0.4 3,078,943 - -1.1 3,078,954 - -1.1 3,078,977 + +1.3 3,079,212 - -1.8 3,079,340 - MPMX26_02963 0.33 +0.0 3,079,340 - MPMX26_02963 0.33 -0.3 3,079,340 - MPMX26_02963 0.33 +0.9 3,079,364 - MPMX26_02963 0.38 +0.3 3,079,448 - MPMX26_02963 0.55 -0.1 3,079,580 - MPMX26_02963 0.83 +0.2 3,079,593 - MPMX26_02963 0.85 -0.4 3,079,613 - MPMX26_02963 0.89 -0.2 3,079,615 - MPMX26_02963 0.90 +0.3 3,079,615 - MPMX26_02963 0.90 +0.9 3,079,712 + +0.2 3,079,743 + +0.5 3,079,745 + -0.5 3,079,758 - +0.1 3,079,758 - +0.7 3,079,765 + +1.4 3,079,765 + +1.9 3,079,781 - +1.7 3,079,790 + +0.9 3,079,790 - -0.4 3,079,793 - +0.2 3,079,793 - +0.1 3,079,798 - +0.8 3,079,798 - +1.0 3,079,798 - +1.1 3,079,816 - -0.3 3,079,816 - +0.1 3,079,816 - +0.5 3,079,829 + -0.3 3,079,870 + -1.2 3,079,873 + -0.2 3,079,873 - +0.3 3,079,873 - -0.5 3,079,873 - -0.2 3,079,875 + -0.0 3,079,878 - -0.3 3,079,878 - -0.0 3,079,878 - -0.3 3,079,878 - -0.6 3,079,883 - -0.7 3,079,883 - +0.2 3,079,883 - +0.1 3,079,883 - +0.8 3,079,883 - +0.3 3,079,883 - +0.2 3,079,883 - -0.9 3,079,883 - +0.5 3,079,883 - +0.2 3,079,885 - -0.3 3,079,888 - +1.1 3,079,907 + -0.1 3,079,910 - +0.1 3,079,998 - MPMX26_02964 0.13 +0.7 3,080,003 - MPMX26_02964 0.13 -0.1 3,080,017 - MPMX26_02964 0.14 -0.5 3,080,017 - MPMX26_02964 0.14 -0.3 3,080,023 + MPMX26_02964 0.14 +0.7 3,080,031 - MPMX26_02964 0.15 +0.7 3,080,031 - MPMX26_02964 0.15 +0.9 3,080,054 + MPMX26_02964 0.16 -1.5 3,080,062 - MPMX26_02964 0.17 -0.2 3,080,062 - MPMX26_02964 0.17 -0.3 3,080,062 - MPMX26_02964 0.17 +0.0 3,080,064 - MPMX26_02964 0.17 +0.0 3,080,086 - MPMX26_02964 0.18 +0.5 3,080,096 - MPMX26_02964 0.19 +0.6 3,080,096 - MPMX26_02964 0.19 +0.4 3,080,096 - MPMX26_02964 0.19 +0.4 3,080,096 - MPMX26_02964 0.19 -0.1 3,080,096 - MPMX26_02964 0.19 -0.3 3,080,101 - MPMX26_02964 0.19 +0.1 3,080,138 - MPMX26_02964 0.22 +0.9 3,080,146 - MPMX26_02964 0.22 -0.7 3,080,196 + MPMX26_02964 0.26 +0.2 3,080,221 - MPMX26_02964 0.27 +1.1 3,080,247 + MPMX26_02964 0.29 +2.7 3,080,285 + MPMX26_02964 0.32 +0.1 3,080,323 - MPMX26_02964 0.34 -0.2 3,080,333 - MPMX26_02964 0.35 -0.1 3,080,387 - MPMX26_02964 0.38 +0.6 3,080,425 - MPMX26_02964 0.41 +0.7 3,080,611 - MPMX26_02964 0.53 -0.5 3,080,611 - MPMX26_02964 0.53 -0.9 3,080,667 + MPMX26_02964 0.57 -0.1 3,080,667 + MPMX26_02964 0.57 -0.4 3,080,677 + MPMX26_02964 0.57 +0.1 3,080,747 - MPMX26_02964 0.62 +0.5 3,080,797 - MPMX26_02964 0.65 -1.5 3,080,809 - MPMX26_02964 0.66 -0.4 3,080,835 - MPMX26_02964 0.68 -1.5 3,080,941 + MPMX26_02964 0.75 -1.7 3,080,941 + MPMX26_02964 0.75 +0.3 3,080,941 + MPMX26_02964 0.75 -1.2 3,080,941 + MPMX26_02964 0.75 -0.7 3,080,949 - MPMX26_02964 0.75 -0.9 3,080,949 - MPMX26_02964 0.75 +0.3 3,080,998 - MPMX26_02964 0.78 +0.2 3,081,041 - MPMX26_02964 0.81 -1.4 3,081,097 + MPMX26_02964 0.85 +0.8 3,081,097 + MPMX26_02964 0.85 -0.5 3,081,097 + MPMX26_02964 0.85 +0.3 3,081,105 - MPMX26_02964 0.85 -1.1 3,081,107 - MPMX26_02964 0.86 -0.1 3,081,107 - MPMX26_02964 0.86 -1.5 3,081,175 - -0.2 3,081,205 - +1.1 3,081,238 - +0.4 3,081,291 - -0.6 3,081,291 - -0.0 3,081,293 - -0.3 3,081,293 - +0.9 3,081,293 - +0.1 3,081,305 - -0.1 3,081,323 - -0.2 3,081,367 - +0.0 3,081,497 + -0.9 3,081,535 + -0.2 3,081,535 + +0.6 3,081,543 + +0.5 3,081,631 + MPMX26_02965 0.24 +0.1 3,081,642 + MPMX26_02965 0.26 +0.2 3,081,642 + MPMX26_02965 0.26 -1.4 3,081,642 + MPMX26_02965 0.26 +0.3 3,081,650 - MPMX26_02965 0.28 +0.6 3,081,650 - MPMX26_02965 0.28 +1.9 3,081,702 + MPMX26_02965 0.40 -0.6 3,081,729 + MPMX26_02965 0.46 +0.2 3,081,729 + MPMX26_02965 0.46 -0.5 3,081,772 + MPMX26_02965 0.56 -0.2 3,081,801 + MPMX26_02965 0.62 -0.2 3,081,801 + MPMX26_02965 0.62 +0.1 3,081,867 + MPMX26_02965 0.77 -0.1 3,081,873 + MPMX26_02965 0.79 -0.2 3,081,873 + MPMX26_02965 0.79 -0.5 3,081,873 + MPMX26_02965 0.79 +0.2 3,081,916 + MPMX26_02965 0.88 -0.3 3,081,944 + +0.2 3,082,013 - -0.3 3,082,094 - MPMX26_02966 0.16 +0.3 3,082,109 - MPMX26_02966 0.19 +1.2 3,082,121 - MPMX26_02966 0.21 +0.6 3,082,121 - MPMX26_02966 0.21 -1.2 3,082,121 - MPMX26_02966 0.21 -0.3 3,082,121 - MPMX26_02966 0.21 +0.4 3,082,126 - MPMX26_02966 0.23 +0.0 3,082,126 - MPMX26_02966 0.23 +0.2 3,082,140 - MPMX26_02966 0.25 -0.3 3,082,178 - MPMX26_02966 0.33 +1.3 3,082,185 - MPMX26_02966 0.35 +0.5 3,082,199 - MPMX26_02966 0.38 -0.1 3,082,204 - MPMX26_02966 0.39 +1.3 3,082,204 - MPMX26_02966 0.39 +0.0 3,082,204 - MPMX26_02966 0.39 -0.2 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 +0.0 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 +0.1 3,082,204 - MPMX26_02966 0.39 +0.6 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 -0.2 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 -0.5 3,082,204 - MPMX26_02966 0.39 -0.6 3,082,204 - MPMX26_02966 0.39 +0.4 3,082,204 - MPMX26_02966 0.39 -0.6 3,082,204 - MPMX26_02966 0.39 +0.9 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 -0.1 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 +1.0 3,082,204 - MPMX26_02966 0.39 +0.9 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 -0.0 3,082,204 - MPMX26_02966 0.39 +0.6 3,082,204 - MPMX26_02966 0.39 +0.0 3,082,204 - MPMX26_02966 0.39 -2.0 3,082,204 - MPMX26_02966 0.39 +0.4 3,082,204 - MPMX26_02966 0.39 +0.0 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,204 - MPMX26_02966 0.39 +0.1 3,082,204 - MPMX26_02966 0.39 -0.0 3,082,204 - MPMX26_02966 0.39 +0.7 3,082,204 - MPMX26_02966 0.39 +0.1 3,082,204 - MPMX26_02966 0.39 +0.8 3,082,204 - MPMX26_02966 0.39 +0.5 3,082,204 - MPMX26_02966 0.39 +0.7 3,082,204 - MPMX26_02966 0.39 +0.1 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 -0.4 3,082,204 - MPMX26_02966 0.39 -0.5 3,082,204 - MPMX26_02966 0.39 +0.3 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,204 - MPMX26_02966 0.39 +0.2 3,082,216 - MPMX26_02966 0.41 +0.1 3,082,217 - MPMX26_02966 0.41 +0.4 3,082,218 - MPMX26_02966 0.42 +0.6 3,082,285 - MPMX26_02966 0.56 -0.2 3,082,285 - MPMX26_02966 0.56 +0.1 3,082,318 + MPMX26_02966 0.62 +0.1
Or see this region's nucleotide sequence