Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02964

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02962 and MPMX26_02963 are separated by 172 nucleotidesMPMX26_02963 and MPMX26_02964 are separated by 140 nucleotidesMPMX26_02964 and MPMX26_02965 are separated by 200 nucleotidesMPMX26_02965 and MPMX26_02966 are separated by 51 nucleotides MPMX26_02962: MPMX26_02962 - Nicotinate phosphoribosyltransferase 2, at 3,077,798 to 3,079,006 _02962 MPMX26_02963: MPMX26_02963 - hypothetical protein, at 3,079,179 to 3,079,664 _02963 MPMX26_02964: MPMX26_02964 - Catalase, at 3,079,805 to 3,081,325 _02964 MPMX26_02965: MPMX26_02965 - D-aminoacyl-tRNA deacylase, at 3,081,526 to 3,081,966 _02965 MPMX26_02966: MPMX26_02966 - hypothetical protein, at 3,082,018 to 3,082,497 _02966 Position (kb) 3079 3080 3081 3082Strain fitness (log2 ratio) -2 -1 0 1 2at 3078.858 kb on - strand, within MPMX26_02962at 3078.879 kb on - strand, within MPMX26_02962at 3078.882 kb on - strand, within MPMX26_02962at 3078.887 kb on - strandat 3078.943 kb on - strandat 3078.954 kb on - strandat 3078.977 kb on + strandat 3079.212 kb on - strandat 3079.340 kb on - strand, within MPMX26_02963at 3079.340 kb on - strand, within MPMX26_02963at 3079.340 kb on - strand, within MPMX26_02963at 3079.364 kb on - strand, within MPMX26_02963at 3079.448 kb on - strand, within MPMX26_02963at 3079.580 kb on - strand, within MPMX26_02963at 3079.593 kb on - strand, within MPMX26_02963at 3079.613 kb on - strand, within MPMX26_02963at 3079.615 kb on - strand, within MPMX26_02963at 3079.615 kb on - strand, within MPMX26_02963at 3079.712 kb on + strandat 3079.743 kb on + strandat 3079.745 kb on + strandat 3079.758 kb on - strandat 3079.758 kb on - strandat 3079.765 kb on + strandat 3079.765 kb on + strandat 3079.781 kb on - strandat 3079.790 kb on + strandat 3079.790 kb on - strandat 3079.793 kb on - strandat 3079.793 kb on - strandat 3079.798 kb on - strandat 3079.798 kb on - strandat 3079.798 kb on - strandat 3079.816 kb on - strandat 3079.816 kb on - strandat 3079.816 kb on - strandat 3079.829 kb on + strandat 3079.870 kb on + strandat 3079.873 kb on + strandat 3079.873 kb on - strandat 3079.873 kb on - strandat 3079.873 kb on - strandat 3079.875 kb on + strandat 3079.878 kb on - strandat 3079.878 kb on - strandat 3079.878 kb on - strandat 3079.878 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.883 kb on - strandat 3079.885 kb on - strandat 3079.888 kb on - strandat 3079.907 kb on + strandat 3079.910 kb on - strandat 3079.998 kb on - strand, within MPMX26_02964at 3080.003 kb on - strand, within MPMX26_02964at 3080.017 kb on - strand, within MPMX26_02964at 3080.017 kb on - strand, within MPMX26_02964at 3080.023 kb on + strand, within MPMX26_02964at 3080.031 kb on - strand, within MPMX26_02964at 3080.031 kb on - strand, within MPMX26_02964at 3080.054 kb on + strand, within MPMX26_02964at 3080.062 kb on - strand, within MPMX26_02964at 3080.062 kb on - strand, within MPMX26_02964at 3080.062 kb on - strand, within MPMX26_02964at 3080.064 kb on - strand, within MPMX26_02964at 3080.086 kb on - strand, within MPMX26_02964at 3080.096 kb on - strand, within MPMX26_02964at 3080.096 kb on - strand, within MPMX26_02964at 3080.096 kb on - strand, within MPMX26_02964at 3080.096 kb on - strand, within MPMX26_02964at 3080.096 kb on - strand, within MPMX26_02964at 3080.101 kb on - strand, within MPMX26_02964at 3080.138 kb on - strand, within MPMX26_02964at 3080.146 kb on - strand, within MPMX26_02964at 3080.196 kb on + strand, within MPMX26_02964at 3080.221 kb on - strand, within MPMX26_02964at 3080.247 kb on + strand, within MPMX26_02964at 3080.285 kb on + strand, within MPMX26_02964at 3080.323 kb on - strand, within MPMX26_02964at 3080.333 kb on - strand, within MPMX26_02964at 3080.387 kb on - strand, within MPMX26_02964at 3080.425 kb on - strand, within MPMX26_02964at 3080.611 kb on - strand, within MPMX26_02964at 3080.611 kb on - strand, within MPMX26_02964at 3080.667 kb on + strand, within MPMX26_02964at 3080.667 kb on + strand, within MPMX26_02964at 3080.677 kb on + strand, within MPMX26_02964at 3080.747 kb on - strand, within MPMX26_02964at 3080.797 kb on - strand, within MPMX26_02964at 3080.809 kb on - strand, within MPMX26_02964at 3080.835 kb on - strand, within MPMX26_02964at 3080.941 kb on + strand, within MPMX26_02964at 3080.941 kb on + strand, within MPMX26_02964at 3080.941 kb on + strand, within MPMX26_02964at 3080.941 kb on + strand, within MPMX26_02964at 3080.949 kb on - strand, within MPMX26_02964at 3080.949 kb on - strand, within MPMX26_02964at 3080.998 kb on - strand, within MPMX26_02964at 3081.041 kb on - strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.097 kb on + strand, within MPMX26_02964at 3081.105 kb on - strand, within MPMX26_02964at 3081.107 kb on - strand, within MPMX26_02964at 3081.107 kb on - strand, within MPMX26_02964at 3081.175 kb on - strandat 3081.205 kb on - strandat 3081.238 kb on - strandat 3081.291 kb on - strandat 3081.291 kb on - strandat 3081.293 kb on - strandat 3081.293 kb on - strandat 3081.293 kb on - strandat 3081.305 kb on - strandat 3081.323 kb on - strandat 3081.367 kb on - strandat 3081.497 kb on + strandat 3081.535 kb on + strandat 3081.535 kb on + strandat 3081.543 kb on + strandat 3081.631 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.642 kb on + strand, within MPMX26_02965at 3081.650 kb on - strand, within MPMX26_02965at 3081.650 kb on - strand, within MPMX26_02965at 3081.702 kb on + strand, within MPMX26_02965at 3081.729 kb on + strand, within MPMX26_02965at 3081.729 kb on + strand, within MPMX26_02965at 3081.772 kb on + strand, within MPMX26_02965at 3081.801 kb on + strand, within MPMX26_02965at 3081.801 kb on + strand, within MPMX26_02965at 3081.867 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.873 kb on + strand, within MPMX26_02965at 3081.916 kb on + strand, within MPMX26_02965at 3081.944 kb on + strandat 3082.013 kb on - strandat 3082.094 kb on - strand, within MPMX26_02966at 3082.109 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.121 kb on - strand, within MPMX26_02966at 3082.126 kb on - strand, within MPMX26_02966at 3082.126 kb on - strand, within MPMX26_02966at 3082.140 kb on - strand, within MPMX26_02966at 3082.178 kb on - strand, within MPMX26_02966at 3082.185 kb on - strand, within MPMX26_02966at 3082.199 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.204 kb on - strand, within MPMX26_02966at 3082.216 kb on - strand, within MPMX26_02966at 3082.217 kb on - strand, within MPMX26_02966at 3082.218 kb on - strand, within MPMX26_02966at 3082.285 kb on - strand, within MPMX26_02966at 3082.285 kb on - strand, within MPMX26_02966at 3082.318 kb on + strand, within MPMX26_02966

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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3,078,858 - MPMX26_02962 0.88 -0.8
3,078,879 - MPMX26_02962 0.89 -0.7
3,078,882 - MPMX26_02962 0.90 -1.6
3,078,887 - -0.4
3,078,943 - -1.1
3,078,954 - -1.1
3,078,977 + +1.3
3,079,212 - -1.8
3,079,340 - MPMX26_02963 0.33 +0.0
3,079,340 - MPMX26_02963 0.33 -0.3
3,079,340 - MPMX26_02963 0.33 +0.9
3,079,364 - MPMX26_02963 0.38 +0.3
3,079,448 - MPMX26_02963 0.55 -0.1
3,079,580 - MPMX26_02963 0.83 +0.2
3,079,593 - MPMX26_02963 0.85 -0.4
3,079,613 - MPMX26_02963 0.89 -0.2
3,079,615 - MPMX26_02963 0.90 +0.3
3,079,615 - MPMX26_02963 0.90 +0.9
3,079,712 + +0.2
3,079,743 + +0.5
3,079,745 + -0.5
3,079,758 - +0.1
3,079,758 - +0.7
3,079,765 + +1.4
3,079,765 + +1.9
3,079,781 - +1.7
3,079,790 + +0.9
3,079,790 - -0.4
3,079,793 - +0.2
3,079,793 - +0.1
3,079,798 - +0.8
3,079,798 - +1.0
3,079,798 - +1.1
3,079,816 - -0.3
3,079,816 - +0.1
3,079,816 - +0.5
3,079,829 + -0.3
3,079,870 + -1.2
3,079,873 + -0.2
3,079,873 - +0.3
3,079,873 - -0.5
3,079,873 - -0.2
3,079,875 + -0.0
3,079,878 - -0.3
3,079,878 - -0.0
3,079,878 - -0.3
3,079,878 - -0.6
3,079,883 - -0.7
3,079,883 - +0.2
3,079,883 - +0.1
3,079,883 - +0.8
3,079,883 - +0.3
3,079,883 - +0.2
3,079,883 - -0.9
3,079,883 - +0.5
3,079,883 - +0.2
3,079,885 - -0.3
3,079,888 - +1.1
3,079,907 + -0.1
3,079,910 - +0.1
3,079,998 - MPMX26_02964 0.13 +0.7
3,080,003 - MPMX26_02964 0.13 -0.1
3,080,017 - MPMX26_02964 0.14 -0.5
3,080,017 - MPMX26_02964 0.14 -0.3
3,080,023 + MPMX26_02964 0.14 +0.7
3,080,031 - MPMX26_02964 0.15 +0.7
3,080,031 - MPMX26_02964 0.15 +0.9
3,080,054 + MPMX26_02964 0.16 -1.5
3,080,062 - MPMX26_02964 0.17 -0.2
3,080,062 - MPMX26_02964 0.17 -0.3
3,080,062 - MPMX26_02964 0.17 +0.0
3,080,064 - MPMX26_02964 0.17 +0.0
3,080,086 - MPMX26_02964 0.18 +0.5
3,080,096 - MPMX26_02964 0.19 +0.6
3,080,096 - MPMX26_02964 0.19 +0.4
3,080,096 - MPMX26_02964 0.19 +0.4
3,080,096 - MPMX26_02964 0.19 -0.1
3,080,096 - MPMX26_02964 0.19 -0.3
3,080,101 - MPMX26_02964 0.19 +0.1
3,080,138 - MPMX26_02964 0.22 +0.9
3,080,146 - MPMX26_02964 0.22 -0.7
3,080,196 + MPMX26_02964 0.26 +0.2
3,080,221 - MPMX26_02964 0.27 +1.1
3,080,247 + MPMX26_02964 0.29 +2.7
3,080,285 + MPMX26_02964 0.32 +0.1
3,080,323 - MPMX26_02964 0.34 -0.2
3,080,333 - MPMX26_02964 0.35 -0.1
3,080,387 - MPMX26_02964 0.38 +0.6
3,080,425 - MPMX26_02964 0.41 +0.7
3,080,611 - MPMX26_02964 0.53 -0.5
3,080,611 - MPMX26_02964 0.53 -0.9
3,080,667 + MPMX26_02964 0.57 -0.1
3,080,667 + MPMX26_02964 0.57 -0.4
3,080,677 + MPMX26_02964 0.57 +0.1
3,080,747 - MPMX26_02964 0.62 +0.5
3,080,797 - MPMX26_02964 0.65 -1.5
3,080,809 - MPMX26_02964 0.66 -0.4
3,080,835 - MPMX26_02964 0.68 -1.5
3,080,941 + MPMX26_02964 0.75 -1.7
3,080,941 + MPMX26_02964 0.75 +0.3
3,080,941 + MPMX26_02964 0.75 -1.2
3,080,941 + MPMX26_02964 0.75 -0.7
3,080,949 - MPMX26_02964 0.75 -0.9
3,080,949 - MPMX26_02964 0.75 +0.3
3,080,998 - MPMX26_02964 0.78 +0.2
3,081,041 - MPMX26_02964 0.81 -1.4
3,081,097 + MPMX26_02964 0.85 +0.8
3,081,097 + MPMX26_02964 0.85 -0.5
3,081,097 + MPMX26_02964 0.85 +0.3
3,081,105 - MPMX26_02964 0.85 -1.1
3,081,107 - MPMX26_02964 0.86 -0.1
3,081,107 - MPMX26_02964 0.86 -1.5
3,081,175 - -0.2
3,081,205 - +1.1
3,081,238 - +0.4
3,081,291 - -0.6
3,081,291 - -0.0
3,081,293 - -0.3
3,081,293 - +0.9
3,081,293 - +0.1
3,081,305 - -0.1
3,081,323 - -0.2
3,081,367 - +0.0
3,081,497 + -0.9
3,081,535 + -0.2
3,081,535 + +0.6
3,081,543 + +0.5
3,081,631 + MPMX26_02965 0.24 +0.1
3,081,642 + MPMX26_02965 0.26 +0.2
3,081,642 + MPMX26_02965 0.26 -1.4
3,081,642 + MPMX26_02965 0.26 +0.3
3,081,650 - MPMX26_02965 0.28 +0.6
3,081,650 - MPMX26_02965 0.28 +1.9
3,081,702 + MPMX26_02965 0.40 -0.6
3,081,729 + MPMX26_02965 0.46 +0.2
3,081,729 + MPMX26_02965 0.46 -0.5
3,081,772 + MPMX26_02965 0.56 -0.2
3,081,801 + MPMX26_02965 0.62 -0.2
3,081,801 + MPMX26_02965 0.62 +0.1
3,081,867 + MPMX26_02965 0.77 -0.1
3,081,873 + MPMX26_02965 0.79 -0.2
3,081,873 + MPMX26_02965 0.79 -0.5
3,081,873 + MPMX26_02965 0.79 +0.2
3,081,916 + MPMX26_02965 0.88 -0.3
3,081,944 + +0.2
3,082,013 - -0.3
3,082,094 - MPMX26_02966 0.16 +0.3
3,082,109 - MPMX26_02966 0.19 +1.2
3,082,121 - MPMX26_02966 0.21 +0.6
3,082,121 - MPMX26_02966 0.21 -1.2
3,082,121 - MPMX26_02966 0.21 -0.3
3,082,121 - MPMX26_02966 0.21 +0.4
3,082,126 - MPMX26_02966 0.23 +0.0
3,082,126 - MPMX26_02966 0.23 +0.2
3,082,140 - MPMX26_02966 0.25 -0.3
3,082,178 - MPMX26_02966 0.33 +1.3
3,082,185 - MPMX26_02966 0.35 +0.5
3,082,199 - MPMX26_02966 0.38 -0.1
3,082,204 - MPMX26_02966 0.39 +1.3
3,082,204 - MPMX26_02966 0.39 +0.0
3,082,204 - MPMX26_02966 0.39 -0.2
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 +0.0
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 +0.1
3,082,204 - MPMX26_02966 0.39 +0.6
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 -0.2
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 -0.5
3,082,204 - MPMX26_02966 0.39 -0.6
3,082,204 - MPMX26_02966 0.39 +0.4
3,082,204 - MPMX26_02966 0.39 -0.6
3,082,204 - MPMX26_02966 0.39 +0.9
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 -0.1
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 +1.0
3,082,204 - MPMX26_02966 0.39 +0.9
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 -0.0
3,082,204 - MPMX26_02966 0.39 +0.6
3,082,204 - MPMX26_02966 0.39 +0.0
3,082,204 - MPMX26_02966 0.39 -2.0
3,082,204 - MPMX26_02966 0.39 +0.4
3,082,204 - MPMX26_02966 0.39 +0.0
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,204 - MPMX26_02966 0.39 +0.1
3,082,204 - MPMX26_02966 0.39 -0.0
3,082,204 - MPMX26_02966 0.39 +0.7
3,082,204 - MPMX26_02966 0.39 +0.1
3,082,204 - MPMX26_02966 0.39 +0.8
3,082,204 - MPMX26_02966 0.39 +0.5
3,082,204 - MPMX26_02966 0.39 +0.7
3,082,204 - MPMX26_02966 0.39 +0.1
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 -0.4
3,082,204 - MPMX26_02966 0.39 -0.5
3,082,204 - MPMX26_02966 0.39 +0.3
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,204 - MPMX26_02966 0.39 +0.2
3,082,216 - MPMX26_02966 0.41 +0.1
3,082,217 - MPMX26_02966 0.41 +0.4
3,082,218 - MPMX26_02966 0.42 +0.6
3,082,285 - MPMX26_02966 0.56 -0.2
3,082,285 - MPMX26_02966 0.56 +0.1
3,082,318 + MPMX26_02966 0.62 +0.1

Or see this region's nucleotide sequence