Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02283

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02281 and MPMX26_02282 are separated by 12 nucleotidesMPMX26_02282 and MPMX26_02283 are separated by 74 nucleotidesMPMX26_02283 and MPMX26_02284 are separated by 147 nucleotides MPMX26_02281: MPMX26_02281 - Penicillin-binding protein activator LpoA, at 2,352,077 to 2,353,027 _02281 MPMX26_02282: MPMX26_02282 - Ribosomal RNA small subunit methyltransferase I, at 2,353,040 to 2,353,882 _02282 MPMX26_02283: MPMX26_02283 - hypothetical protein, at 2,353,957 to 2,354,217 _02283 MPMX26_02284: MPMX26_02284 - 2-octaprenylphenol hydroxylase, at 2,354,365 to 2,355,606 _02284 Position (kb) 2353 2354 2355Strain fitness (log2 ratio) -2 -1 0 1at 2353.034 kb on + strandat 2353.036 kb on + strandat 2353.127 kb on + strand, within MPMX26_02282at 2353.127 kb on + strand, within MPMX26_02282at 2353.127 kb on + strand, within MPMX26_02282at 2353.225 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.262 kb on + strand, within MPMX26_02282at 2353.274 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.279 kb on + strand, within MPMX26_02282at 2353.288 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.298 kb on + strand, within MPMX26_02282at 2353.327 kb on + strand, within MPMX26_02282at 2353.327 kb on + strand, within MPMX26_02282at 2353.375 kb on + strand, within MPMX26_02282at 2353.396 kb on + strand, within MPMX26_02282at 2353.409 kb on + strand, within MPMX26_02282at 2353.414 kb on + strand, within MPMX26_02282at 2353.535 kb on + strand, within MPMX26_02282at 2353.535 kb on + strand, within MPMX26_02282at 2353.552 kb on + strand, within MPMX26_02282at 2353.571 kb on + strand, within MPMX26_02282at 2353.642 kb on + strand, within MPMX26_02282at 2353.688 kb on + strand, within MPMX26_02282at 2353.705 kb on + strand, within MPMX26_02282at 2353.787 kb on + strand, within MPMX26_02282at 2353.787 kb on + strand, within MPMX26_02282at 2353.944 kb on - strandat 2353.944 kb on - strandat 2353.944 kb on - strandat 2353.949 kb on - strandat 2353.949 kb on - strandat 2353.963 kb on - strandat 2353.968 kb on - strandat 2353.971 kb on - strandat 2353.971 kb on - strandat 2353.977 kb on - strandat 2354.082 kb on - strand, within MPMX26_02283at 2354.094 kb on - strand, within MPMX26_02283at 2354.094 kb on - strand, within MPMX26_02283at 2354.094 kb on - strand, within MPMX26_02283at 2354.132 kb on - strand, within MPMX26_02283at 2354.134 kb on - strand, within MPMX26_02283at 2354.171 kb on - strand, within MPMX26_02283at 2354.180 kb on - strand, within MPMX26_02283at 2354.262 kb on - strandat 2354.267 kb on - strandat 2354.394 kb on - strandat 2354.417 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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2,353,034 + +0.4
2,353,036 + +0.5
2,353,127 + MPMX26_02282 0.10 +0.3
2,353,127 + MPMX26_02282 0.10 +0.1
2,353,127 + MPMX26_02282 0.10 -0.4
2,353,225 + MPMX26_02282 0.22 +0.0
2,353,262 + MPMX26_02282 0.26 -0.2
2,353,262 + MPMX26_02282 0.26 +0.7
2,353,262 + MPMX26_02282 0.26 +0.7
2,353,274 + MPMX26_02282 0.28 +0.9
2,353,279 + MPMX26_02282 0.28 -0.0
2,353,279 + MPMX26_02282 0.28 +0.3
2,353,279 + MPMX26_02282 0.28 +0.0
2,353,288 + MPMX26_02282 0.29 +0.0
2,353,298 + MPMX26_02282 0.31 +0.1
2,353,298 + MPMX26_02282 0.31 +0.1
2,353,298 + MPMX26_02282 0.31 +0.0
2,353,298 + MPMX26_02282 0.31 +0.3
2,353,298 + MPMX26_02282 0.31 -0.5
2,353,298 + MPMX26_02282 0.31 +0.5
2,353,298 + MPMX26_02282 0.31 -0.1
2,353,298 + MPMX26_02282 0.31 +0.0
2,353,298 + MPMX26_02282 0.31 -0.0
2,353,298 + MPMX26_02282 0.31 +0.2
2,353,298 + MPMX26_02282 0.31 -0.6
2,353,298 + MPMX26_02282 0.31 -0.4
2,353,298 + MPMX26_02282 0.31 +0.9
2,353,298 + MPMX26_02282 0.31 -0.1
2,353,298 + MPMX26_02282 0.31 +0.2
2,353,327 + MPMX26_02282 0.34 -0.5
2,353,327 + MPMX26_02282 0.34 -0.9
2,353,375 + MPMX26_02282 0.40 +0.1
2,353,396 + MPMX26_02282 0.42 +0.6
2,353,409 + MPMX26_02282 0.44 -0.6
2,353,414 + MPMX26_02282 0.44 +0.8
2,353,535 + MPMX26_02282 0.59 -0.5
2,353,535 + MPMX26_02282 0.59 +0.5
2,353,552 + MPMX26_02282 0.61 -0.1
2,353,571 + MPMX26_02282 0.63 -0.0
2,353,642 + MPMX26_02282 0.71 +0.1
2,353,688 + MPMX26_02282 0.77 -0.0
2,353,705 + MPMX26_02282 0.79 -0.4
2,353,787 + MPMX26_02282 0.89 -0.7
2,353,787 + MPMX26_02282 0.89 -0.4
2,353,944 - -0.1
2,353,944 - -0.2
2,353,944 - -0.6
2,353,949 - -0.6
2,353,949 - -0.4
2,353,963 - +1.0
2,353,968 - -0.2
2,353,971 - -0.4
2,353,971 - -0.4
2,353,977 - -0.5
2,354,082 - MPMX26_02283 0.48 -1.2
2,354,094 - MPMX26_02283 0.52 -0.2
2,354,094 - MPMX26_02283 0.52 -1.2
2,354,094 - MPMX26_02283 0.52 -0.6
2,354,132 - MPMX26_02283 0.67 -0.9
2,354,134 - MPMX26_02283 0.68 -0.6
2,354,171 - MPMX26_02283 0.82 +0.6
2,354,180 - MPMX26_02283 0.85 -0.5
2,354,262 - -0.2
2,354,267 - -0.7
2,354,394 - -0.3
2,354,417 - -1.9

Or see this region's nucleotide sequence