Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02036

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02034 and MPMX26_02035 are separated by 154 nucleotidesMPMX26_02035 and MPMX26_02036 are separated by 92 nucleotidesMPMX26_02036 and MPMX26_02037 are separated by 308 nucleotides MPMX26_02034: MPMX26_02034 - Transcriptional regulatory protein QseB, at 2,100,415 to 2,101,074 _02034 MPMX26_02035: MPMX26_02035 - hypothetical protein, at 2,101,229 to 2,101,588 _02035 MPMX26_02036: MPMX26_02036 - hypothetical protein, at 2,101,681 to 2,103,438 _02036 MPMX26_02037: MPMX26_02037 - hypothetical protein, at 2,103,747 to 2,104,691 _02037 Position (kb) 2101 2102 2103 2104Strain fitness (log2 ratio) -1 0 1 2at 2101.707 kb on - strandat 2101.707 kb on - strandat 2101.728 kb on - strandat 2101.728 kb on - strandat 2101.728 kb on - strandat 2101.728 kb on - strandat 2101.728 kb on - strandat 2101.825 kb on - strandat 2101.830 kb on - strandat 2101.858 kb on - strand, within MPMX26_02036at 2101.858 kb on - strand, within MPMX26_02036at 2101.878 kb on - strand, within MPMX26_02036at 2101.924 kb on - strand, within MPMX26_02036at 2101.924 kb on - strand, within MPMX26_02036at 2102.079 kb on - strand, within MPMX26_02036at 2102.106 kb on - strand, within MPMX26_02036at 2102.106 kb on - strand, within MPMX26_02036at 2102.148 kb on - strand, within MPMX26_02036at 2102.170 kb on - strand, within MPMX26_02036at 2102.179 kb on - strand, within MPMX26_02036at 2102.188 kb on - strand, within MPMX26_02036at 2102.188 kb on - strand, within MPMX26_02036at 2102.307 kb on - strand, within MPMX26_02036at 2102.347 kb on - strand, within MPMX26_02036at 2102.347 kb on - strand, within MPMX26_02036at 2102.383 kb on - strand, within MPMX26_02036at 2102.383 kb on - strand, within MPMX26_02036at 2102.419 kb on - strand, within MPMX26_02036at 2102.440 kb on - strand, within MPMX26_02036at 2102.445 kb on - strand, within MPMX26_02036at 2102.467 kb on - strand, within MPMX26_02036at 2102.467 kb on - strand, within MPMX26_02036at 2102.467 kb on - strand, within MPMX26_02036at 2102.511 kb on - strand, within MPMX26_02036at 2102.580 kb on - strand, within MPMX26_02036at 2102.598 kb on - strand, within MPMX26_02036at 2102.625 kb on - strand, within MPMX26_02036at 2102.653 kb on - strand, within MPMX26_02036at 2102.706 kb on - strand, within MPMX26_02036at 2102.898 kb on - strand, within MPMX26_02036at 2102.898 kb on - strand, within MPMX26_02036at 2102.904 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.001 kb on - strand, within MPMX26_02036at 2103.070 kb on - strand, within MPMX26_02036at 2103.080 kb on - strand, within MPMX26_02036at 2103.085 kb on - strand, within MPMX26_02036at 2103.085 kb on - strand, within MPMX26_02036at 2103.096 kb on - strand, within MPMX26_02036at 2103.276 kb on - strandat 2103.306 kb on - strandat 2103.352 kb on - strandat 2103.357 kb on - strandat 2103.499 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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2,101,707 - -1.4
2,101,707 - +0.3
2,101,728 - -0.4
2,101,728 - -0.5
2,101,728 - -0.8
2,101,728 - -1.6
2,101,728 - +0.3
2,101,825 - -0.6
2,101,830 - +0.7
2,101,858 - MPMX26_02036 0.10 +0.5
2,101,858 - MPMX26_02036 0.10 -0.1
2,101,878 - MPMX26_02036 0.11 -0.3
2,101,924 - MPMX26_02036 0.14 +1.0
2,101,924 - MPMX26_02036 0.14 -0.1
2,102,079 - MPMX26_02036 0.23 -0.1
2,102,106 - MPMX26_02036 0.24 +0.6
2,102,106 - MPMX26_02036 0.24 -0.4
2,102,148 - MPMX26_02036 0.27 -0.5
2,102,170 - MPMX26_02036 0.28 -0.1
2,102,179 - MPMX26_02036 0.28 -0.1
2,102,188 - MPMX26_02036 0.29 +0.3
2,102,188 - MPMX26_02036 0.29 +0.1
2,102,307 - MPMX26_02036 0.36 +0.2
2,102,347 - MPMX26_02036 0.38 +0.2
2,102,347 - MPMX26_02036 0.38 +1.3
2,102,383 - MPMX26_02036 0.40 +1.0
2,102,383 - MPMX26_02036 0.40 +1.4
2,102,419 - MPMX26_02036 0.42 +0.2
2,102,440 - MPMX26_02036 0.43 +0.5
2,102,445 - MPMX26_02036 0.43 +0.2
2,102,467 - MPMX26_02036 0.45 +1.0
2,102,467 - MPMX26_02036 0.45 -0.2
2,102,467 - MPMX26_02036 0.45 +0.6
2,102,511 - MPMX26_02036 0.47 +0.4
2,102,580 - MPMX26_02036 0.51 +0.2
2,102,598 - MPMX26_02036 0.52 +0.2
2,102,625 - MPMX26_02036 0.54 +0.5
2,102,653 - MPMX26_02036 0.55 -0.3
2,102,706 - MPMX26_02036 0.58 -0.1
2,102,898 - MPMX26_02036 0.69 -0.4
2,102,898 - MPMX26_02036 0.69 +0.0
2,102,904 - MPMX26_02036 0.70 +0.3
2,103,001 - MPMX26_02036 0.75 +0.7
2,103,001 - MPMX26_02036 0.75 +0.0
2,103,001 - MPMX26_02036 0.75 +0.7
2,103,001 - MPMX26_02036 0.75 +0.1
2,103,001 - MPMX26_02036 0.75 +2.0
2,103,001 - MPMX26_02036 0.75 +0.6
2,103,001 - MPMX26_02036 0.75 -0.7
2,103,070 - MPMX26_02036 0.79 +0.9
2,103,080 - MPMX26_02036 0.80 +0.7
2,103,085 - MPMX26_02036 0.80 +1.5
2,103,085 - MPMX26_02036 0.80 -1.4
2,103,096 - MPMX26_02036 0.80 -0.2
2,103,276 - -0.1
2,103,306 - -0.2
2,103,352 - +0.3
2,103,357 - +0.3
2,103,499 - -0.4

Or see this region's nucleotide sequence