Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01293

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01292 and MPMX26_01293 overlap by 14 nucleotidesMPMX26_01293 and MPMX26_01294 are separated by 339 nucleotides MPMX26_01292: MPMX26_01292 - DNA-binding transcriptional regulator NtrC, at 1,367,472 to 1,368,947 _01292 MPMX26_01293: MPMX26_01293 - Sensory histidine kinase/phosphatase NtrB, at 1,368,934 to 1,370,043 _01293 MPMX26_01294: MPMX26_01294 - Ribosomal protein S12 methylthiotransferase RimO, at 1,370,383 to 1,371,726 _01294 Position (kb) 1368 1369 1370 1371Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1368.059 kb on - strand, within MPMX26_01292at 1368.156 kb on - strand, within MPMX26_01292at 1368.183 kb on - strand, within MPMX26_01292at 1368.183 kb on - strand, within MPMX26_01292at 1368.255 kb on - strand, within MPMX26_01292at 1368.255 kb on - strand, within MPMX26_01292at 1368.255 kb on - strand, within MPMX26_01292at 1368.255 kb on - strand, within MPMX26_01292at 1368.276 kb on - strand, within MPMX26_01292at 1368.276 kb on - strand, within MPMX26_01292at 1368.365 kb on - strand, within MPMX26_01292at 1368.428 kb on - strand, within MPMX26_01292at 1368.428 kb on - strand, within MPMX26_01292at 1368.438 kb on - strand, within MPMX26_01292at 1368.473 kb on - strand, within MPMX26_01292at 1368.548 kb on - strand, within MPMX26_01292at 1368.606 kb on - strand, within MPMX26_01292at 1368.617 kb on - strand, within MPMX26_01292at 1368.623 kb on - strand, within MPMX26_01292at 1368.635 kb on - strand, within MPMX26_01292at 1368.642 kb on - strand, within MPMX26_01292at 1368.711 kb on - strand, within MPMX26_01292at 1368.735 kb on - strand, within MPMX26_01292at 1368.735 kb on - strand, within MPMX26_01292at 1368.735 kb on - strand, within MPMX26_01292at 1368.735 kb on - strand, within MPMX26_01292at 1368.743 kb on - strand, within MPMX26_01292at 1368.743 kb on - strand, within MPMX26_01292at 1368.828 kb on - strandat 1368.828 kb on - strandat 1368.828 kb on - strandat 1368.828 kb on - strandat 1368.833 kb on - strandat 1368.833 kb on - strandat 1368.833 kb on - strandat 1368.833 kb on - strandat 1368.837 kb on - strandat 1368.843 kb on - strandat 1368.860 kb on - strandat 1368.875 kb on - strandat 1368.963 kb on - strandat 1368.975 kb on - strandat 1369.006 kb on - strandat 1369.024 kb on - strandat 1369.044 kb on - strandat 1369.044 kb on - strandat 1369.056 kb on - strand, within MPMX26_01293at 1369.056 kb on - strand, within MPMX26_01293at 1369.056 kb on - strand, within MPMX26_01293at 1369.062 kb on - strand, within MPMX26_01293at 1369.089 kb on - strand, within MPMX26_01293at 1369.206 kb on - strand, within MPMX26_01293at 1369.311 kb on - strand, within MPMX26_01293at 1369.347 kb on - strand, within MPMX26_01293at 1369.407 kb on - strand, within MPMX26_01293at 1369.416 kb on - strand, within MPMX26_01293at 1369.613 kb on - strand, within MPMX26_01293at 1369.813 kb on - strand, within MPMX26_01293at 1369.813 kb on - strand, within MPMX26_01293at 1369.932 kb on - strand, within MPMX26_01293at 1370.001 kb on - strandat 1370.362 kb on + strandat 1370.548 kb on + strand, within MPMX26_01294at 1370.548 kb on + strand, within MPMX26_01294at 1370.548 kb on + strand, within MPMX26_01294at 1370.707 kb on + strand, within MPMX26_01294at 1370.715 kb on + strand, within MPMX26_01294at 1370.725 kb on + strand, within MPMX26_01294at 1370.728 kb on + strand, within MPMX26_01294at 1370.764 kb on + strand, within MPMX26_01294at 1370.810 kb on + strand, within MPMX26_01294at 1370.818 kb on + strand, within MPMX26_01294at 1370.818 kb on + strand, within MPMX26_01294at 1370.829 kb on + strand, within MPMX26_01294at 1370.831 kb on + strand, within MPMX26_01294at 1370.843 kb on + strand, within MPMX26_01294at 1370.848 kb on + strand, within MPMX26_01294at 1370.866 kb on + strand, within MPMX26_01294at 1370.888 kb on + strand, within MPMX26_01294at 1370.911 kb on + strand, within MPMX26_01294at 1370.911 kb on + strand, within MPMX26_01294at 1370.955 kb on + strand, within MPMX26_01294at 1370.959 kb on + strand, within MPMX26_01294at 1370.960 kb on + strand, within MPMX26_01294at 1370.985 kb on + strand, within MPMX26_01294at 1371.039 kb on + strand, within MPMX26_01294at 1371.039 kb on + strand, within MPMX26_01294

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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1,368,059 - MPMX26_01292 0.40 -1.7
1,368,156 - MPMX26_01292 0.46 -2.3
1,368,183 - MPMX26_01292 0.48 -1.2
1,368,183 - MPMX26_01292 0.48 -1.8
1,368,255 - MPMX26_01292 0.53 -1.5
1,368,255 - MPMX26_01292 0.53 -1.5
1,368,255 - MPMX26_01292 0.53 -1.7
1,368,255 - MPMX26_01292 0.53 -1.1
1,368,276 - MPMX26_01292 0.54 -1.4
1,368,276 - MPMX26_01292 0.54 -1.0
1,368,365 - MPMX26_01292 0.61 -1.7
1,368,428 - MPMX26_01292 0.65 -1.3
1,368,428 - MPMX26_01292 0.65 -1.1
1,368,438 - MPMX26_01292 0.65 -3.0
1,368,473 - MPMX26_01292 0.68 -0.8
1,368,548 - MPMX26_01292 0.73 -1.9
1,368,606 - MPMX26_01292 0.77 -2.0
1,368,617 - MPMX26_01292 0.78 -1.3
1,368,623 - MPMX26_01292 0.78 -2.0
1,368,635 - MPMX26_01292 0.79 -2.3
1,368,642 - MPMX26_01292 0.79 -0.9
1,368,711 - MPMX26_01292 0.84 -1.2
1,368,735 - MPMX26_01292 0.86 -3.6
1,368,735 - MPMX26_01292 0.86 -1.5
1,368,735 - MPMX26_01292 0.86 -2.4
1,368,735 - MPMX26_01292 0.86 -0.9
1,368,743 - MPMX26_01292 0.86 -2.5
1,368,743 - MPMX26_01292 0.86 -1.4
1,368,828 - -0.6
1,368,828 - -0.7
1,368,828 - -0.7
1,368,828 - -1.7
1,368,833 - -2.0
1,368,833 - -1.7
1,368,833 - -1.7
1,368,833 - -1.7
1,368,837 - -2.3
1,368,843 - -1.4
1,368,860 - -2.0
1,368,875 - -1.5
1,368,963 - -1.0
1,368,975 - +0.4
1,369,006 - -0.5
1,369,024 - -1.4
1,369,044 - +0.3
1,369,044 - +0.8
1,369,056 - MPMX26_01293 0.11 -0.8
1,369,056 - MPMX26_01293 0.11 -0.8
1,369,056 - MPMX26_01293 0.11 -0.9
1,369,062 - MPMX26_01293 0.12 +0.1
1,369,089 - MPMX26_01293 0.14 -0.5
1,369,206 - MPMX26_01293 0.25 -0.5
1,369,311 - MPMX26_01293 0.34 -0.7
1,369,347 - MPMX26_01293 0.37 +0.0
1,369,407 - MPMX26_01293 0.43 -0.5
1,369,416 - MPMX26_01293 0.43 -0.9
1,369,613 - MPMX26_01293 0.61 -1.6
1,369,813 - MPMX26_01293 0.79 +0.0
1,369,813 - MPMX26_01293 0.79 -0.9
1,369,932 - MPMX26_01293 0.90 -0.5
1,370,001 - -0.8
1,370,362 + -0.1
1,370,548 + MPMX26_01294 0.12 -0.6
1,370,548 + MPMX26_01294 0.12 +1.0
1,370,548 + MPMX26_01294 0.12 -0.6
1,370,707 + MPMX26_01294 0.24 +2.0
1,370,715 + MPMX26_01294 0.25 -0.2
1,370,725 + MPMX26_01294 0.25 -1.1
1,370,728 + MPMX26_01294 0.26 +0.1
1,370,764 + MPMX26_01294 0.28 +0.5
1,370,810 + MPMX26_01294 0.32 -1.3
1,370,818 + MPMX26_01294 0.32 +0.1
1,370,818 + MPMX26_01294 0.32 +0.2
1,370,829 + MPMX26_01294 0.33 +0.4
1,370,831 + MPMX26_01294 0.33 +0.3
1,370,843 + MPMX26_01294 0.34 +0.2
1,370,848 + MPMX26_01294 0.35 -0.5
1,370,866 + MPMX26_01294 0.36 +0.1
1,370,888 + MPMX26_01294 0.38 +0.3
1,370,911 + MPMX26_01294 0.39 +0.4
1,370,911 + MPMX26_01294 0.39 -0.2
1,370,955 + MPMX26_01294 0.43 +0.7
1,370,959 + MPMX26_01294 0.43 +0.0
1,370,960 + MPMX26_01294 0.43 -0.3
1,370,985 + MPMX26_01294 0.45 +0.7
1,371,039 + MPMX26_01294 0.49 -0.1
1,371,039 + MPMX26_01294 0.49 +0.2

Or see this region's nucleotide sequence