Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00798

Experiment: L-Histidine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00796 and MPMX26_00797 are separated by 341 nucleotidesMPMX26_00797 and MPMX26_00798 are separated by 148 nucleotidesMPMX26_00798 and MPMX26_00799 are separated by 290 nucleotides MPMX26_00796: MPMX26_00796 - hypothetical protein, at 840,889 to 841,158 _00796 MPMX26_00797: MPMX26_00797 - hypothetical protein, at 841,500 to 841,709 _00797 MPMX26_00798: MPMX26_00798 - hypothetical protein, at 841,858 to 844,209 _00798 MPMX26_00799: MPMX26_00799 - hypothetical protein, at 844,500 to 845,783 _00799 Position (kb) 841 842 843 844 845Strain fitness (log2 ratio) -1 0 1at 841.322 kb on + strandat 841.685 kb on + strand, within MPMX26_00797at 842.208 kb on + strand, within MPMX26_00798at 842.373 kb on + strand, within MPMX26_00798at 842.657 kb on + strand, within MPMX26_00798at 843.038 kb on + strand, within MPMX26_00798at 843.445 kb on + strand, within MPMX26_00798at 843.477 kb on + strand, within MPMX26_00798

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
remove
841,322 + +0.6
841,685 + MPMX26_00797 0.88 -1.6
842,208 + MPMX26_00798 0.15 -0.3
842,373 + MPMX26_00798 0.22 -0.0
842,657 + MPMX26_00798 0.34 +1.4
843,038 + MPMX26_00798 0.50 -0.7
843,445 + MPMX26_00798 0.67 -0.1
843,477 + MPMX26_00798 0.69 -0.1

Or see this region's nucleotide sequence