Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF927
Experiment: Ying_sugar7 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 2 |
|---|---|---|---|---|---|
| remove | |||||
| 658,920 | + | GFF926 | 0.41 | +0.2 | |
| 659,169 | - | -0.6 | |||
| 659,287 | + | GFF927 | 0.25 | -0.4 | |
| 659,347 | + | GFF927 | 0.39 | +0.3 | |
| 659,509 | + | GFF927 | 0.75 | +0.2 | |
| 659,510 | - | GFF927 | 0.75 | +0.7 | |
| 659,777 | - | GFF928 | 0.11 | +0.4 | |
| 659,860 | + | GFF928 | 0.18 | -0.2 | |
| 659,927 | - | GFF928 | 0.23 | +0.3 | |
| 660,352 | + | GFF928 | 0.59 | -0.6 | |
| 660,353 | - | GFF928 | 0.59 | -0.4 | |
| 660,353 | - | GFF928 | 0.59 | +1.5 | |
| 660,395 | + | GFF928 | 0.63 | -0.3 |
Or see this region's nucleotide sequence