Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5415

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,416,040	+		GFF5414	0.68	-0.8
2,416,336	+				-1.5
2,416,337	-				-0.4
2,416,337	-				-2.8
2,416,442	-		GFF5415	0.13	-0.6
2,416,631	-		GFF5415	0.24	-0.9
2,416,681	+		GFF5415	0.27	+0.4
2,416,681	+		GFF5415	0.27	-1.3
2,416,682	-		GFF5415	0.27	-0.4
2,417,005	+		GFF5415	0.46	-2.1
2,417,006	-		GFF5415	0.46	-0.4
2,417,536	+		GFF5415	0.77	-0.9
2,417,925	+				+0.4
2,417,925	+				-1.6