Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4909

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,923,829	+		GFF4908	0.32	-0.6
1,923,829	+		GFF4908	0.32	-0.4
1,923,829	+		GFF4908	0.32	-0.5
1,923,830	-		GFF4908	0.32	+0.7
1,923,830	-		GFF4908	0.32	-0.5
1,923,830	-		GFF4908	0.32	-0.1
1,924,423	+		GFF4908	0.75	-0.7
1,924,424	-		GFF4908	0.75	-0.8
1,924,424	-		GFF4908	0.75	-0.8
1,924,564	+		GFF4908	0.86	-1.7
1,924,564	+		GFF4908	0.86	-0.1
1,924,564	+		GFF4908	0.86	-1.3
1,924,564	+		GFF4908	0.86	-1.0
1,924,564	+		GFF4908	0.86	-1.0
1,924,565	-		GFF4908	0.86	+0.3
1,924,702	+				-0.2
1,924,703	-				-0.7
1,924,703	-				-1.1
1,924,703	-				+0.9