Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3716

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
608,650	+		GFF3715	0.58	-0.7
608,651	-		GFF3715	0.58	+0.6
608,651	-		GFF3715	0.58	-0.2
608,651	-		GFF3715	0.58	+0.3
608,662	+		GFF3715	0.59	-0.4
608,851	+		GFF3715	0.71	+0.8
608,852	-		GFF3715	0.71	+0.7
608,852	-		GFF3715	0.71	-0.2
608,852	-		GFF3715	0.71	-0.7
609,539	+		GFF3716	0.22	+0.4
609,744	-		GFF3716	0.43	+0.5
610,375	+				+0.2
610,376	-				+0.2
610,720	+		GFF3717	0.34	+1.1
611,183	-		GFF3717	0.74	+1.3