Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3229

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
111,362	+		GFF3228	0.38	-0.3
111,797	+		GFF3228	0.78	-0.5
111,959	+				+0.4
112,123	+				+0.6
112,132	-				-0.2
112,230	+				+0.6
112,505	+		GFF3229	0.51	+0.3
112,532	+		GFF3229	0.56	+0.1
112,532	+		GFF3229	0.56	+0.3
112,586	+		GFF3229	0.66	+0.4
112,805	-				-0.4
113,046	+		GFF3230	0.12	-0.4
113,046	+		GFF3230	0.12	+0.2
113,046	+		GFF3230	0.12	-0.2
113,116	-		GFF3230	0.16	+1.3
113,694	+		GFF3230	0.48	-0.4