Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2610

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
202,568	+				+0.3
202,568	+				+0.9
202,569	-				+0.3
202,700	+		GFF2610	0.11	-0.6
202,701	-		GFF2610	0.11	-0.8
202,701	-		GFF2610	0.11	-0.2
202,701	-		GFF2610	0.11	+0.0
202,701	-		GFF2610	0.11	-0.6
203,161	+		GFF2610	0.47	-1.0
203,312	+		GFF2610	0.59	-0.1
203,313	-		GFF2610	0.59	-0.3
203,513	+		GFF2610	0.75	+0.0
203,598	-		GFF2610	0.81	-0.2
203,656	+		GFF2610	0.86	-1.0
203,777	+				-0.4
203,778	-				+0.6
203,865	+				+0.3
203,866	-				+0.4
203,866	-				+0.5
204,084	+		GFF2611	0.12	-0.3
204,084	+		GFF2611	0.12	-0.1
204,085	-		GFF2611	0.12	-0.3
204,459	+		GFF2611	0.33	-1.5
204,459	+		GFF2611	0.33	-1.0
204,459	+		GFF2611	0.33	+0.1
204,582	+		GFF2611	0.40	+0.6