Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2106

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
993,250	-		GFF2105	0.59	+0.1
993,250	-		GFF2105	0.59	-0.2
993,863	+		GFF2106	0.15	-0.0
993,863	+		GFF2106	0.15	+0.4
993,863	+		GFF2106	0.15	-0.7
993,863	+		GFF2106	0.15	-0.3
993,864	-		GFF2106	0.15	-0.3
993,864	-		GFF2106	0.15	+0.0
993,864	-		GFF2106	0.15	-0.5
994,005	-		GFF2106	0.29	-1.8
994,127	+		GFF2106	0.42	+0.2
994,128	-		GFF2106	0.42	+0.0
995,051	+		GFF2107	0.32	+0.3
995,051	+		GFF2107	0.32	-0.4
995,052	-		GFF2107	0.32	+0.2
995,105	+		GFF2107	0.37	+0.5
995,105	+		GFF2107	0.37	-0.1
995,105	+		GFF2107	0.37	+1.2
995,114	+		GFF2107	0.38	-0.1
995,115	-		GFF2107	0.38	+0.1
995,396	+		GFF2107	0.64	-0.9