Strain Fitness in Escherichia fergusonii Becca around EFB2_03427

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community
3,581,506	+		EFB2_03426	0.14	+1.3
3,581,520	+		EFB2_03426	0.15	+0.7
3,581,538	+		EFB2_03426	0.17	-1.0
3,581,617	+		EFB2_03426	0.24	-0.3
3,581,617	+		EFB2_03426	0.24	-0.9
3,581,617	+		EFB2_03426	0.24	+2.3
3,581,617	+		EFB2_03426	0.24	+0.7
3,581,617	+		EFB2_03426	0.24	-1.0
3,581,617	+		EFB2_03426	0.24	-0.3
3,581,617	+		EFB2_03426	0.24	+0.7
3,581,617	+		EFB2_03426	0.24	-1.1
3,581,620	+		EFB2_03426	0.24	-0.7
3,581,620	+		EFB2_03426	0.24	-1.3
3,581,620	+		EFB2_03426	0.24	-0.0
3,581,620	+		EFB2_03426	0.24	+0.2
3,581,620	+		EFB2_03426	0.24	+0.1
3,581,620	+		EFB2_03426	0.24	+2.3
3,581,620	+		EFB2_03426	0.24	+0.4
3,581,620	+		EFB2_03426	0.24	-0.0
3,581,620	+		EFB2_03426	0.24	-1.0
3,581,624	+		EFB2_03426	0.25	+2.3
3,581,624	+		EFB2_03426	0.25	-1.7
3,581,624	+		EFB2_03426	0.25	-0.5
3,581,624	+		EFB2_03426	0.25	-0.7
3,581,638	+		EFB2_03426	0.26	-1.3
3,581,638	+		EFB2_03426	0.26	-1.0
3,581,638	+		EFB2_03426	0.26	+1.8
3,581,718	+		EFB2_03426	0.33	+0.7
3,581,718	+		EFB2_03426	0.33	-0.0
3,581,718	+		EFB2_03426	0.33	+0.4
3,581,770	+		EFB2_03426	0.37	-0.9
3,581,770	+		EFB2_03426	0.37	+0.3
3,581,788	+		EFB2_03426	0.39	-1.0
3,581,839	+		EFB2_03426	0.43	-0.5
3,581,839	+		EFB2_03426	0.43	+0.3
3,581,993	+		EFB2_03426	0.57	-0.0
3,581,993	+		EFB2_03426	0.57	+3.5
3,581,993	+		EFB2_03426	0.57	-0.3
3,581,993	+		EFB2_03426	0.57	-1.5
3,581,993	+		EFB2_03426	0.57	-1.7
3,581,994	-		EFB2_03426	0.57	-0.3
3,581,994	-		EFB2_03426	0.57	-0.0
3,582,008	+		EFB2_03426	0.58	+0.7
3,582,008	+		EFB2_03426	0.58	-2.1
3,582,008	+		EFB2_03426	0.58	+2.3
3,582,008	+		EFB2_03426	0.58	+0.7
3,582,008	+		EFB2_03426	0.58	-0.9
3,582,008	+		EFB2_03426	0.58	-0.0
3,582,008	+		EFB2_03426	0.58	+2.3
3,582,008	+		EFB2_03426	0.58	-0.0
3,582,009	-		EFB2_03426	0.58	+0.3
3,582,009	-		EFB2_03426	0.58	-0.7
3,582,010	+		EFB2_03426	0.58	-0.5
3,582,010	+		EFB2_03426	0.58	+0.7
3,582,010	+		EFB2_03426	0.58	-0.9
3,582,010	+		EFB2_03426	0.58	-1.1
3,582,010	+		EFB2_03426	0.58	-1.0
3,582,065	+		EFB2_03426	0.63	+1.3
3,582,065	+		EFB2_03426	0.63	+1.6
3,582,065	+		EFB2_03426	0.63	-0.3
3,582,065	+		EFB2_03426	0.63	-0.0
3,582,065	+		EFB2_03426	0.63	-1.6
3,582,076	+		EFB2_03426	0.64	+0.3
3,582,076	+		EFB2_03426	0.64	+1.3
3,582,076	+		EFB2_03426	0.64	+0.4
3,582,076	+		EFB2_03426	0.64	+0.3
3,582,101	+		EFB2_03426	0.66	-0.9
3,582,216	+		EFB2_03426	0.76	-0.7
3,582,216	+		EFB2_03426	0.76	-0.5
3,582,216	+		EFB2_03426	0.76	-2.1
3,582,216	+		EFB2_03426	0.76	+2.0
3,582,216	+		EFB2_03426	0.76	+0.3
3,582,216	+		EFB2_03426	0.76	-0.7
3,582,218	+		EFB2_03426	0.76	-0.5
3,582,218	+		EFB2_03426	0.76	+1.3
3,582,218	+		EFB2_03426	0.76	-0.6
3,582,218	+		EFB2_03426	0.76	+0.6
3,582,218	+		EFB2_03426	0.76	+0.7
3,582,218	+		EFB2_03426	0.76	+0.8
3,582,218	+		EFB2_03426	0.76	-1.1
3,582,218	+		EFB2_03426	0.76	-1.0
3,582,218	+		EFB2_03426	0.76	+1.3
3,582,218	+		EFB2_03426	0.76	+1.8
3,582,218	+		EFB2_03426	0.76	-0.4
3,582,218	+		EFB2_03426	0.76	+1.6
3,582,218	+		EFB2_03426	0.76	+1.3
3,582,218	+		EFB2_03426	0.76	+0.1
3,582,218	+		EFB2_03426	0.76	-1.3
3,582,218	+		EFB2_03426	0.76	-0.9
3,582,218	+		EFB2_03426	0.76	-0.9
3,582,218	+		EFB2_03426	0.76	+1.3
3,582,218	+		EFB2_03426	0.76	-1.1
3,582,221	+		EFB2_03426	0.77	-1.1
3,582,221	+		EFB2_03426	0.77	-1.9
3,582,221	+		EFB2_03426	0.77	-2.5
3,582,221	+		EFB2_03426	0.77	-0.9
3,582,253	+		EFB2_03426	0.79	-1.4
3,582,258	+		EFB2_03426	0.80	-0.3
3,582,273	+		EFB2_03426	0.81	+1.3
3,582,295	+		EFB2_03426	0.83	-0.8
3,582,295	+		EFB2_03426	0.83	-1.6
3,582,340	+		EFB2_03426	0.87	+2.3
3,582,340	+		EFB2_03426	0.87	-0.3
3,582,354	-		EFB2_03426	0.88	+2.0
3,582,406	+				+2.3
3,582,406	+				-1.5
3,582,480	+				+0.3
3,582,480	+				-1.6
3,582,489	-				+1.5
3,582,498	+				+1.5
3,582,498	+				-2.4
3,582,498	+				-1.0
3,582,498	+				-1.0
3,582,498	+				+0.5
3,582,498	+				+0.1
3,582,498	+				+0.7
3,582,498	+				+1.9
3,582,498	+				+0.3
3,582,499	-				+1.3
3,582,499	-				+1.9
3,582,499	-				-0.5
3,582,499	-				+0.7
3,582,499	-				-0.5
3,582,499	-				-0.6
3,582,499	-				+0.9
3,582,499	-				+2.3
3,582,499	-				-1.6
3,582,499	-				+1.4
3,582,499	-				-0.7
3,582,499	-				+1.3
3,582,499	-				-1.3
3,582,524	+				-2.1
3,582,524	+				-0.4
3,582,524	+				-1.3
3,582,524	+				+1.5
3,582,524	+				-0.6
3,582,524	+				-3.0
3,582,524	+				+0.8
3,582,524	+				+1.4
3,582,524	+				-1.7
3,582,524	+				+2.0
3,582,524	+				-0.6
3,582,524	+				+0.2
3,582,524	+				+0.7
3,582,524	+				+0.3
3,582,528	+				+0.6
3,582,528	+				+0.5
3,582,528	+				-1.3
3,582,528	+				+2.3
3,582,528	+				+0.6
3,582,528	+				-1.2
3,582,528	+				+0.8
3,582,528	+				-0.7
3,582,528	+				+2.6
3,582,528	+				+0.5
3,582,528	+				+1.4
3,582,528	+				+1.4
3,582,528	+				-2.2
3,582,529	-				+2.0
3,582,529	-				-1.3
3,582,529	-				-1.1
3,582,529	-				-0.3
3,582,542	+				-1.6
3,582,542	+				-2.1
3,582,552	+				-0.7
3,582,552	+				+0.9
3,582,552	+				-1.6
3,582,552	+				+1.7
3,582,553	-				+0.7
3,582,644	+		EFB2_03427	0.12	+0.4
3,582,667	-		EFB2_03427	0.14	+2.3
3,582,858	+		EFB2_03427	0.29	-2.1
3,582,858	+		EFB2_03427	0.29	-1.3
3,582,859	-		EFB2_03427	0.29	-1.7
3,582,906	+		EFB2_03427	0.33	-0.5
3,582,907	-		EFB2_03427	0.33	+2.1
3,582,912	+		EFB2_03427	0.34	-1.9
3,582,912	+		EFB2_03427	0.34	+1.0
3,582,912	+		EFB2_03427	0.34	-1.1
3,582,912	+		EFB2_03427	0.34	+0.5
3,582,912	+		EFB2_03427	0.34	-1.9
3,582,912	+		EFB2_03427	0.34	-1.9
3,582,912	+		EFB2_03427	0.34	+0.3
3,582,913	-		EFB2_03427	0.34	-0.0
3,582,913	-		EFB2_03427	0.34	-1.8
3,582,913	-		EFB2_03427	0.34	+0.7
3,582,913	-		EFB2_03427	0.34	+3.8
3,582,913	-		EFB2_03427	0.34	-0.0
3,582,916	+		EFB2_03427	0.34	+0.9
3,582,916	+		EFB2_03427	0.34	-1.4
3,582,916	+		EFB2_03427	0.34	+1.2
3,582,916	+		EFB2_03427	0.34	-0.7
3,582,916	+		EFB2_03427	0.34	+0.9
3,582,916	+		EFB2_03427	0.34	+1.9
3,582,916	+		EFB2_03427	0.34	-2.4
3,582,916	+		EFB2_03427	0.34	-0.5
3,582,917	-		EFB2_03427	0.34	+0.5
3,582,917	-		EFB2_03427	0.34	-2.1
3,582,917	-		EFB2_03427	0.34	-1.7
3,582,917	-		EFB2_03427	0.34	-0.7
3,582,917	-		EFB2_03427	0.34	+0.3
3,582,917	-		EFB2_03427	0.34	+2.5
3,582,929	+		EFB2_03427	0.35	+0.0
3,582,930	-		EFB2_03427	0.35	+0.7
3,582,971	+		EFB2_03427	0.39	-0.1
3,582,971	+		EFB2_03427	0.39	+1.3
3,582,971	+		EFB2_03427	0.39	+1.3
3,582,971	+		EFB2_03427	0.39	-0.6
3,582,972	-		EFB2_03427	0.39	+0.5
3,582,972	-		EFB2_03427	0.39	-1.8
3,582,972	-		EFB2_03427	0.39	+2.7
3,582,972	-		EFB2_03427	0.39	-0.5
3,582,972	-		EFB2_03427	0.39	+2.0
3,582,972	-		EFB2_03427	0.39	-0.0
3,582,997	+		EFB2_03427	0.41	+1.5
3,582,998	-		EFB2_03427	0.41	-1.1
3,582,998	-		EFB2_03427	0.41	-1.1
3,582,998	-		EFB2_03427	0.41	-0.0
3,582,998	-		EFB2_03427	0.41	-1.1
3,582,998	-		EFB2_03427	0.41	-2.3
3,583,008	+		EFB2_03427	0.42	+0.4
3,583,008	+		EFB2_03427	0.42	+1.7
3,583,016	+		EFB2_03427	0.42	-1.6
3,583,057	-		EFB2_03427	0.46	+1.2
3,583,111	+		EFB2_03427	0.50	-0.0
3,583,111	+		EFB2_03427	0.50	+2.1
3,583,111	+		EFB2_03427	0.50	-2.0
3,583,111	+		EFB2_03427	0.50	-2.3
3,583,111	+		EFB2_03427	0.50	+1.4
3,583,111	+		EFB2_03427	0.50	+0.8
3,583,111	+		EFB2_03427	0.50	+2.2
3,583,111	+		EFB2_03427	0.50	+2.7
3,583,111	+		EFB2_03427	0.50	-0.3
3,583,112	-		EFB2_03427	0.50	-2.3
3,583,112	-		EFB2_03427	0.50	+1.7
3,583,112	-		EFB2_03427	0.50	+2.0
3,583,112	-		EFB2_03427	0.50	-0.9
3,583,112	-		EFB2_03427	0.50	-0.0
3,583,112	-		EFB2_03427	0.50	-2.0
3,583,112	-		EFB2_03427	0.50	+0.7
3,583,112	-		EFB2_03427	0.50	-0.4
3,583,182	+		EFB2_03427	0.56	-0.5
3,583,182	+		EFB2_03427	0.56	+0.5
3,583,189	-		EFB2_03427	0.57	-0.7
3,583,239	+		EFB2_03427	0.61	-0.1
3,583,299	+		EFB2_03427	0.66	+0.5
3,583,299	+		EFB2_03427	0.66	+0.4
3,583,395	+		EFB2_03427	0.73	+3.9
3,583,395	+		EFB2_03427	0.73	-1.4
3,583,395	+		EFB2_03427	0.73	+0.8
3,583,395	+		EFB2_03427	0.73	-0.3
3,583,396	-		EFB2_03427	0.73	+1.3
3,583,396	-		EFB2_03427	0.73	-1.3
3,583,396	-		EFB2_03427	0.73	+1.0
3,583,396	-		EFB2_03427	0.73	-0.7
3,583,396	-		EFB2_03427	0.73	-1.5
3,583,396	-		EFB2_03427	0.73	-0.4
3,583,447	+		EFB2_03427	0.78	+1.5
3,583,447	+		EFB2_03427	0.78	+0.1
3,583,447	+		EFB2_03427	0.78	+1.6
3,583,447	+		EFB2_03427	0.78	-0.0
3,583,447	+		EFB2_03427	0.78	+0.3
3,583,447	+		EFB2_03427	0.78	-0.2
3,583,447	+		EFB2_03427	0.78	-0.4
3,583,447	+		EFB2_03427	0.78	+2.2
3,583,447	+		EFB2_03427	0.78	+0.1
3,583,447	+		EFB2_03427	0.78	-0.9
3,583,447	+		EFB2_03427	0.78	-0.5
3,583,447	+		EFB2_03427	0.78	-0.3
3,583,448	-		EFB2_03427	0.78	-0.3
3,583,448	-		EFB2_03427	0.78	-0.6
3,583,448	-		EFB2_03427	0.78	+1.1
3,583,448	-		EFB2_03427	0.78	-0.3
3,583,448	-		EFB2_03427	0.78	+1.2
3,583,486	-		EFB2_03427	0.81	+1.3
3,583,486	-		EFB2_03427	0.81	-0.0
3,583,493	+		EFB2_03427	0.81	+0.9
3,583,494	-		EFB2_03427	0.81	+1.2
3,583,494	-		EFB2_03427	0.81	-1.3
3,583,497	+		EFB2_03427	0.82	+0.7
3,583,515	+		EFB2_03427	0.83	-1.0
3,583,560	+		EFB2_03427	0.87	-0.1
3,583,560	+		EFB2_03427	0.87	-1.0
3,583,561	-		EFB2_03427	0.87	+0.5
3,583,561	-		EFB2_03427	0.87	-1.9
3,583,575	+		EFB2_03427	0.88	+0.1
3,583,575	+		EFB2_03427	0.88	+0.5
3,583,575	+		EFB2_03427	0.88	-1.0
3,583,575	+		EFB2_03427	0.88	+1.7
3,583,575	+		EFB2_03427	0.88	+1.3
3,583,575	+		EFB2_03427	0.88	+0.3
3,583,575	+		EFB2_03427	0.88	-0.1
3,583,575	+		EFB2_03427	0.88	-1.4
3,583,576	-		EFB2_03427	0.88	-1.1
3,583,578	+		EFB2_03427	0.88	-1.5
3,583,578	+		EFB2_03427	0.88	-0.0
3,583,579	-		EFB2_03427	0.88	-0.2
3,583,602	+				-0.5
3,583,603	-				-1.1
3,583,605	+				-0.1
3,583,605	+				-0.7
3,583,605	+				-2.5
3,583,605	+				+1.0
3,583,605	+				+1.0
3,583,605	+				-0.5
3,583,605	+				-0.0
3,583,606	-				+1.1
3,583,606	-				-0.0
3,583,606	-				-1.1
3,583,606	-				-1.3
3,583,606	-				+1.3
3,583,606	-				+0.5
3,583,606	-				-0.5
3,583,619	+				+1.4
3,583,619	+				+0.3
3,583,619	+				-2.3
3,583,619	+				-0.7
3,583,620	-				+0.9
3,583,620	-				-0.5
3,583,620	-				-1.8
3,583,620	-				-0.7
3,583,620	-				-0.7
3,583,689	+				+0.4
3,583,690	-				-0.5
3,583,690	-				-0.3
3,583,690	-				+1.3
3,583,717	+				+0.5
3,583,717	+				+0.4
3,583,717	+				-0.5
3,583,718	-				+2.2
3,583,728	+				+0.7
3,583,728	+				+0.1
3,583,728	+				+0.2
3,583,728	+				+0.8
3,583,729	-				-0.1
3,583,729	-				-0.5
3,583,730	+				-1.3
3,583,730	+				-0.8
3,583,730	+				+0.2
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