Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04334

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04331 and BACOVA_04332 are separated by 134 nucleotidesBACOVA_04332 and BACOVA_04333 are separated by 51 nucleotidesBACOVA_04333 and BACOVA_04334 overlap by 4 nucleotidesBACOVA_04334 and BACOVA_04335 are separated by 14 nucleotidesBACOVA_04335 and BACOVA_04336 overlap by 4 nucleotides BACOVA_04331: BACOVA_04331 - hypothetical protein, at 215,879 to 217,540 _04331 BACOVA_04332: BACOVA_04332 - tRNA-Cys, at 217,675 to 217,746 _04332 BACOVA_04333: BACOVA_04333 - hypothetical protein, at 217,798 to 218,013 _04333 BACOVA_04334: BACOVA_04334 - ferrous iron transport protein B, at 218,010 to 220,496 _04334 BACOVA_04335: BACOVA_04335 - hypothetical protein, at 220,511 to 220,645 _04335 BACOVA_04336: BACOVA_04336 - tRNA(Ile)-lysidine synthetase, at 220,642 to 221,922 _04336 Position (kb) 218 219 220 221Strain fitness (log2 ratio) -2 -1 0 1 2 3at 217.670 kb on - strandat 217.889 kb on - strand, within BACOVA_04333at 217.950 kb on - strand, within BACOVA_04333at 218.008 kb on - strandat 220.522 kb on - strandat 220.621 kb on + strand, within BACOVA_04335at 220.641 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
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217,670 - -2.4
217,889 - BACOVA_04333 0.42 -0.4
217,950 - BACOVA_04333 0.70 -1.3
218,008 - +0.4
220,522 - +3.6
220,621 + BACOVA_04335 0.81 -1.4
220,641 + +3.3

Or see this region's nucleotide sequence