Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03652

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03651 and BACOVA_03652 are separated by 114 nucleotidesBACOVA_03652 and BACOVA_03653 are separated by 2 nucleotides BACOVA_03651: BACOVA_03651 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 478,747 to 481,080 _03651 BACOVA_03652: BACOVA_03652 - hypothetical protein, at 481,195 to 485,706 _03652 BACOVA_03653: BACOVA_03653 - outer membrane protein, OMP85 family, at 485,709 to 488,051 _03653 Position (kb) 481 482 483 484 485 486Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 480.290 kb on - strand, within BACOVA_03651at 480.413 kb on + strand, within BACOVA_03651at 480.414 kb on - strand, within BACOVA_03651at 480.414 kb on - strand, within BACOVA_03651at 480.417 kb on + strand, within BACOVA_03651at 480.470 kb on + strand, within BACOVA_03651at 480.486 kb on - strand, within BACOVA_03651at 480.538 kb on - strand, within BACOVA_03651at 480.541 kb on - strand, within BACOVA_03651at 480.542 kb on + strand, within BACOVA_03651at 480.567 kb on + strand, within BACOVA_03651at 480.568 kb on - strand, within BACOVA_03651at 480.598 kb on - strand, within BACOVA_03651at 480.674 kb on + strand, within BACOVA_03651at 480.708 kb on + strand, within BACOVA_03651at 480.710 kb on + strand, within BACOVA_03651at 480.711 kb on - strand, within BACOVA_03651at 480.720 kb on + strand, within BACOVA_03651at 480.721 kb on - strand, within BACOVA_03651at 480.761 kb on - strand, within BACOVA_03651at 480.787 kb on + strand, within BACOVA_03651at 480.934 kb on - strandat 481.013 kb on + strandat 481.014 kb on - strandat 481.031 kb on + strandat 481.032 kb on - strandat 481.061 kb on + strandat 481.062 kb on - strandat 481.105 kb on - strandat 481.107 kb on + strandat 481.107 kb on + strandat 481.107 kb on + strandat 481.107 kb on + strandat 481.123 kb on - strandat 481.125 kb on + strandat 481.126 kb on - strandat 481.177 kb on + strandat 481.237 kb on - strandat 481.237 kb on - strandat 481.237 kb on - strandat 481.243 kb on - strandat 481.243 kb on - strandat 481.244 kb on + strandat 481.245 kb on - strandat 481.248 kb on - strandat 481.259 kb on + strandat 481.364 kb on + strandat 481.490 kb on + strandat 481.626 kb on - strandat 481.770 kb on + strand, within BACOVA_03652at 481.798 kb on - strand, within BACOVA_03652at 481.950 kb on + strand, within BACOVA_03652at 482.008 kb on - strand, within BACOVA_03652at 482.083 kb on + strand, within BACOVA_03652at 482.165 kb on - strand, within BACOVA_03652at 482.222 kb on - strand, within BACOVA_03652at 482.569 kb on + strand, within BACOVA_03652at 482.570 kb on - strand, within BACOVA_03652at 482.608 kb on - strand, within BACOVA_03652at 482.627 kb on + strand, within BACOVA_03652at 482.648 kb on - strand, within BACOVA_03652at 482.685 kb on + strand, within BACOVA_03652at 482.706 kb on + strand, within BACOVA_03652at 482.707 kb on - strand, within BACOVA_03652at 482.736 kb on + strand, within BACOVA_03652at 482.818 kb on + strand, within BACOVA_03652at 482.818 kb on + strand, within BACOVA_03652at 482.923 kb on + strand, within BACOVA_03652at 483.296 kb on - strand, within BACOVA_03652at 483.296 kb on - strand, within BACOVA_03652at 483.342 kb on + strand, within BACOVA_03652at 483.567 kb on - strand, within BACOVA_03652at 483.770 kb on + strand, within BACOVA_03652at 483.862 kb on + strand, within BACOVA_03652at 483.905 kb on - strand, within BACOVA_03652at 483.909 kb on - strand, within BACOVA_03652at 484.034 kb on - strand, within BACOVA_03652at 484.087 kb on - strand, within BACOVA_03652at 484.161 kb on - strand, within BACOVA_03652at 484.253 kb on + strand, within BACOVA_03652at 484.379 kb on - strand, within BACOVA_03652at 484.379 kb on - strand, within BACOVA_03652at 484.431 kb on + strand, within BACOVA_03652at 484.475 kb on - strand, within BACOVA_03652at 484.606 kb on - strand, within BACOVA_03652at 484.618 kb on + strand, within BACOVA_03652at 484.699 kb on - strand, within BACOVA_03652at 484.761 kb on - strand, within BACOVA_03652at 484.765 kb on - strand, within BACOVA_03652at 484.855 kb on + strand, within BACOVA_03652at 484.970 kb on - strand, within BACOVA_03652at 484.970 kb on - strand, within BACOVA_03652at 485.138 kb on + strand, within BACOVA_03652at 485.488 kb on - strandat 485.667 kb on + strandat 485.704 kb on + strandat 485.719 kb on + strandat 485.719 kb on + strandat 485.719 kb on + strandat 485.719 kb on + strandat 485.721 kb on + strandat 485.722 kb on - strandat 485.841 kb on - strandat 485.937 kb on - strandat 485.959 kb on - strand, within BACOVA_03653at 485.961 kb on - strand, within BACOVA_03653at 486.065 kb on + strand, within BACOVA_03653at 486.066 kb on - strand, within BACOVA_03653at 486.083 kb on - strand, within BACOVA_03653at 486.120 kb on + strand, within BACOVA_03653at 486.121 kb on - strand, within BACOVA_03653at 486.175 kb on + strand, within BACOVA_03653at 486.176 kb on - strand, within BACOVA_03653at 486.270 kb on + strand, within BACOVA_03653at 486.273 kb on - strand, within BACOVA_03653at 486.420 kb on - strand, within BACOVA_03653at 486.478 kb on - strand, within BACOVA_03653at 486.560 kb on - strand, within BACOVA_03653

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
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480,290 - BACOVA_03651 0.66 +1.7
480,413 + BACOVA_03651 0.71 +0.3
480,414 - BACOVA_03651 0.71 -0.5
480,414 - BACOVA_03651 0.71 -0.0
480,417 + BACOVA_03651 0.72 -0.3
480,470 + BACOVA_03651 0.74 -0.5
480,486 - BACOVA_03651 0.75 -0.7
480,538 - BACOVA_03651 0.77 -1.3
480,541 - BACOVA_03651 0.77 +2.4
480,542 + BACOVA_03651 0.77 -0.8
480,567 + BACOVA_03651 0.78 -1.0
480,568 - BACOVA_03651 0.78 +0.2
480,598 - BACOVA_03651 0.79 -1.7
480,674 + BACOVA_03651 0.83 -0.3
480,708 + BACOVA_03651 0.84 +0.1
480,710 + BACOVA_03651 0.84 +0.0
480,711 - BACOVA_03651 0.84 -2.0
480,720 + BACOVA_03651 0.85 +0.8
480,721 - BACOVA_03651 0.85 -1.1
480,761 - BACOVA_03651 0.86 -1.2
480,787 + BACOVA_03651 0.87 +3.3
480,934 - +3.7
481,013 + -1.5
481,014 - +0.3
481,031 + +0.6
481,032 - -3.5
481,061 + -1.3
481,062 - +1.3
481,105 - -0.7
481,107 + +0.3
481,107 + -0.6
481,107 + -2.9
481,107 + -1.7
481,123 - -0.9
481,125 + -1.9
481,126 - -1.5
481,177 + -0.1
481,237 - +0.3
481,237 - +2.9
481,237 - +0.9
481,243 - -0.3
481,243 - -1.4
481,244 + -0.1
481,245 - -0.1
481,248 - +0.1
481,259 + +0.1
481,364 + +0.3
481,490 + -0.3
481,626 - -0.5
481,770 + BACOVA_03652 0.13 +2.1
481,798 - BACOVA_03652 0.13 +2.1
481,950 + BACOVA_03652 0.17 +1.5
482,008 - BACOVA_03652 0.18 -0.1
482,083 + BACOVA_03652 0.20 +0.5
482,165 - BACOVA_03652 0.21 +0.3
482,222 - BACOVA_03652 0.23 +0.1
482,569 + BACOVA_03652 0.30 +0.1
482,570 - BACOVA_03652 0.30 -0.1
482,608 - BACOVA_03652 0.31 -0.5
482,627 + BACOVA_03652 0.32 -1.1
482,648 - BACOVA_03652 0.32 -0.5
482,685 + BACOVA_03652 0.33 +0.9
482,706 + BACOVA_03652 0.33 +0.3
482,707 - BACOVA_03652 0.34 +0.3
482,736 + BACOVA_03652 0.34 +0.3
482,818 + BACOVA_03652 0.36 +0.3
482,818 + BACOVA_03652 0.36 +1.0
482,923 + BACOVA_03652 0.38 +0.1
483,296 - BACOVA_03652 0.47 -0.1
483,296 - BACOVA_03652 0.47 +0.5
483,342 + BACOVA_03652 0.48 +1.0
483,567 - BACOVA_03652 0.53 +0.1
483,770 + BACOVA_03652 0.57 +0.3
483,862 + BACOVA_03652 0.59 +0.3
483,905 - BACOVA_03652 0.60 +0.9
483,909 - BACOVA_03652 0.60 -0.8
484,034 - BACOVA_03652 0.63 -0.5
484,087 - BACOVA_03652 0.64 -0.5
484,161 - BACOVA_03652 0.66 -0.1
484,253 + BACOVA_03652 0.68 -0.1
484,379 - BACOVA_03652 0.71 -0.3
484,379 - BACOVA_03652 0.71 +1.1
484,431 + BACOVA_03652 0.72 +0.1
484,475 - BACOVA_03652 0.73 +0.1
484,606 - BACOVA_03652 0.76 -0.1
484,618 + BACOVA_03652 0.76 -1.3
484,699 - BACOVA_03652 0.78 -0.9
484,761 - BACOVA_03652 0.79 -0.1
484,765 - BACOVA_03652 0.79 +0.1
484,855 + BACOVA_03652 0.81 -1.4
484,970 - BACOVA_03652 0.84 -0.5
484,970 - BACOVA_03652 0.84 +0.1
485,138 + BACOVA_03652 0.87 +0.3
485,488 - +0.9
485,667 + -1.8
485,704 + -1.2
485,719 + +0.9
485,719 + +3.3
485,719 + +0.3
485,719 + -0.8
485,721 + -2.4
485,722 - -0.3
485,841 - +0.1
485,937 - +0.1
485,959 - BACOVA_03653 0.11 +0.5
485,961 - BACOVA_03653 0.11 +0.9
486,065 + BACOVA_03653 0.15 +1.3
486,066 - BACOVA_03653 0.15 -1.2
486,083 - BACOVA_03653 0.16 -0.5
486,120 + BACOVA_03653 0.18 +0.9
486,121 - BACOVA_03653 0.18 +1.1
486,175 + BACOVA_03653 0.20 +1.3
486,176 - BACOVA_03653 0.20 -0.3
486,270 + BACOVA_03653 0.24 +0.5
486,273 - BACOVA_03653 0.24 +0.1
486,420 - BACOVA_03653 0.30 -1.1
486,478 - BACOVA_03653 0.33 -0.5
486,560 - BACOVA_03653 0.36 -0.3

Or see this region's nucleotide sequence