Experiment: Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00521 and BACOVA_00522 are separated by 6 nucleotides BACOVA_00522 and BACOVA_00523 are separated by 275 nucleotides BACOVA_00523 and BACOVA_00524 are separated by 65 nucleotides BACOVA_00524 and BACOVA_00525 are separated by 28 nucleotides
BACOVA_00521: BACOVA_00521 - hypothetical protein, at 20,301 to 21,728
_00521
BACOVA_00522: BACOVA_00522 - hypothetical protein, at 21,735 to 21,881
_00522
BACOVA_00523: BACOVA_00523 - tRNA-Ser, at 22,157 to 22,243
_00523
BACOVA_00524: BACOVA_00524 - tRNA-Glu, at 22,309 to 22,380
_00524
BACOVA_00525: BACOVA_00525 - hypothetical protein, at 22,409 to 23,230
_00525
Position (kb)
22
23 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 21.254 kb on + strand, within BACOVA_00521 at 21.254 kb on + strand, within BACOVA_00521 at 21.255 kb on - strand, within BACOVA_00521 at 21.292 kb on + strand, within BACOVA_00521 at 21.319 kb on + strand, within BACOVA_00521 at 21.319 kb on + strand, within BACOVA_00521 at 21.320 kb on - strand, within BACOVA_00521 at 21.320 kb on - strand, within BACOVA_00521 at 21.336 kb on + strand, within BACOVA_00521 at 21.419 kb on - strand, within BACOVA_00521 at 21.446 kb on + strand, within BACOVA_00521 at 21.496 kb on - strand, within BACOVA_00521 at 21.497 kb on + strand, within BACOVA_00521 at 21.497 kb on + strand, within BACOVA_00521 at 21.497 kb on + strand, within BACOVA_00521 at 21.498 kb on - strand, within BACOVA_00521 at 21.498 kb on - strand, within BACOVA_00521 at 21.498 kb on - strand, within BACOVA_00521 at 21.553 kb on + strand, within BACOVA_00521 at 21.554 kb on - strand, within BACOVA_00521 at 21.569 kb on - strand, within BACOVA_00521 at 21.569 kb on - strand, within BACOVA_00521 at 21.600 kb on + strand at 21.600 kb on + strand at 21.601 kb on - strand at 21.601 kb on - strand at 21.614 kb on - strand at 21.639 kb on + strand at 21.650 kb on - strand at 21.851 kb on + strand, within BACOVA_00522 at 21.855 kb on + strand, within BACOVA_00522 at 21.888 kb on + strand at 21.917 kb on - strand at 21.934 kb on + strand at 21.943 kb on + strand at 22.043 kb on - strand at 22.050 kb on + strand at 22.051 kb on - strand at 22.257 kb on + strand at 22.258 kb on - strand at 22.277 kb on - strand at 22.292 kb on + strand at 22.298 kb on + strand at 22.299 kb on - strand at 22.352 kb on + strand, within BACOVA_00524 at 22.353 kb on - strand, within BACOVA_00524 at 22.380 kb on - strand at 22.406 kb on + strand at 22.410 kb on + strand at 22.410 kb on + strand at 22.431 kb on + strand at 22.518 kb on + strand, within BACOVA_00525 at 22.518 kb on + strand, within BACOVA_00525 at 22.518 kb on + strand, within BACOVA_00525 at 22.519 kb on - strand, within BACOVA_00525 at 22.519 kb on - strand, within BACOVA_00525 at 22.552 kb on - strand, within BACOVA_00525 at 22.552 kb on - strand, within BACOVA_00525 at 22.555 kb on + strand, within BACOVA_00525 at 22.556 kb on - strand, within BACOVA_00525 at 22.645 kb on + strand, within BACOVA_00525 at 22.646 kb on - strand, within BACOVA_00525 at 22.673 kb on + strand, within BACOVA_00525 at 22.683 kb on + strand, within BACOVA_00525 at 22.684 kb on - strand, within BACOVA_00525 at 22.684 kb on - strand, within BACOVA_00525 at 22.687 kb on + strand, within BACOVA_00525 at 22.688 kb on - strand, within BACOVA_00525 at 22.715 kb on + strand, within BACOVA_00525 at 22.778 kb on - strand, within BACOVA_00525 at 22.780 kb on - strand, within BACOVA_00525 at 22.806 kb on + strand, within BACOVA_00525 at 22.820 kb on - strand, within BACOVA_00525 at 22.820 kb on - strand, within BACOVA_00525 at 22.820 kb on - strand, within BACOVA_00525 at 22.861 kb on + strand, within BACOVA_00525 at 22.861 kb on + strand, within BACOVA_00525 at 22.944 kb on + strand, within BACOVA_00525 at 22.964 kb on + strand, within BACOVA_00525 at 22.964 kb on + strand, within BACOVA_00525 at 22.968 kb on + strand, within BACOVA_00525 at 22.968 kb on + strand, within BACOVA_00525 at 22.978 kb on + strand, within BACOVA_00525 at 22.987 kb on + strand, within BACOVA_00525 at 22.987 kb on + strand, within BACOVA_00525 at 22.988 kb on - strand, within BACOVA_00525 at 23.077 kb on + strand, within BACOVA_00525 at 23.085 kb on - strand, within BACOVA_00525 at 23.085 kb on - strand, within BACOVA_00525 at 23.124 kb on - strand, within BACOVA_00525 at 23.124 kb on - strand, within BACOVA_00525 at 23.131 kb on + strand, within BACOVA_00525 at 23.138 kb on + strand, within BACOVA_00525 at 23.146 kb on + strand, within BACOVA_00525 at 23.198 kb on + strand at 23.199 kb on - strand at 23.213 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/mL (C) remove 21,254 + BACOVA_00521 0.67 +2.3 21,254 + BACOVA_00521 0.67 +3.7 21,255 - BACOVA_00521 0.67 +3.6 21,292 + BACOVA_00521 0.69 -1.5 21,319 + BACOVA_00521 0.71 -0.1 21,319 + BACOVA_00521 0.71 -2.3 21,320 - BACOVA_00521 0.71 -0.4 21,320 - BACOVA_00521 0.71 +0.9 21,336 + BACOVA_00521 0.72 -1.4 21,419 - BACOVA_00521 0.78 -1.9 21,446 + BACOVA_00521 0.80 -0.7 21,496 - BACOVA_00521 0.84 -2.0 21,497 + BACOVA_00521 0.84 -1.2 21,497 + BACOVA_00521 0.84 +0.3 21,497 + BACOVA_00521 0.84 -3.5 21,498 - BACOVA_00521 0.84 +2.9 21,498 - BACOVA_00521 0.84 +1.1 21,498 - BACOVA_00521 0.84 -0.1 21,553 + BACOVA_00521 0.88 +2.7 21,554 - BACOVA_00521 0.88 +0.4 21,569 - BACOVA_00521 0.89 +0.7 21,569 - BACOVA_00521 0.89 -0.3 21,600 + +2.4 21,600 + +1.8 21,601 - -0.3 21,601 - -2.2 21,614 - -1.8 21,639 + +0.1 21,650 - +1.0 21,851 + BACOVA_00522 0.79 -2.2 21,855 + BACOVA_00522 0.82 +2.4 21,888 + -0.2 21,917 - -0.1 21,934 + +1.2 21,943 + +1.1 22,043 - -0.9 22,050 + -1.2 22,051 - +1.1 22,257 + -2.3 22,258 - +2.8 22,277 - -0.8 22,292 + +0.3 22,298 + -1.7 22,299 - -0.5 22,352 + BACOVA_00524 0.60 +3.7 22,353 - BACOVA_00524 0.61 +0.4 22,380 - +0.3 22,406 + +0.6 22,410 + -0.3 22,410 + +1.6 22,431 + +1.2 22,518 + BACOVA_00525 0.13 -0.1 22,518 + BACOVA_00525 0.13 -0.7 22,518 + BACOVA_00525 0.13 +1.2 22,519 - BACOVA_00525 0.13 -0.7 22,519 - BACOVA_00525 0.13 -0.5 22,552 - BACOVA_00525 0.17 -0.2 22,552 - BACOVA_00525 0.17 -0.9 22,555 + BACOVA_00525 0.18 -0.7 22,556 - BACOVA_00525 0.18 -1.6 22,645 + BACOVA_00525 0.29 -0.8 22,646 - BACOVA_00525 0.29 -0.7 22,673 + BACOVA_00525 0.32 -0.5 22,683 + BACOVA_00525 0.33 -0.8 22,684 - BACOVA_00525 0.33 -1.9 22,684 - BACOVA_00525 0.33 +0.7 22,687 + BACOVA_00525 0.34 +0.4 22,688 - BACOVA_00525 0.34 -3.2 22,715 + BACOVA_00525 0.37 -2.8 22,778 - BACOVA_00525 0.45 +0.4 22,780 - BACOVA_00525 0.45 +1.3 22,806 + BACOVA_00525 0.48 -2.5 22,820 - BACOVA_00525 0.50 -0.3 22,820 - BACOVA_00525 0.50 -2.9 22,820 - BACOVA_00525 0.50 -0.8 22,861 + BACOVA_00525 0.55 +0.3 22,861 + BACOVA_00525 0.55 +2.1 22,944 + BACOVA_00525 0.65 -0.9 22,964 + BACOVA_00525 0.68 +0.1 22,964 + BACOVA_00525 0.68 -1.8 22,968 + BACOVA_00525 0.68 +1.5 22,968 + BACOVA_00525 0.68 -1.4 22,978 + BACOVA_00525 0.69 +1.1 22,987 + BACOVA_00525 0.70 -0.3 22,987 + BACOVA_00525 0.70 -0.1 22,988 - BACOVA_00525 0.70 -2.0 23,077 + BACOVA_00525 0.81 +0.4 23,085 - BACOVA_00525 0.82 +0.3 23,085 - BACOVA_00525 0.82 -1.9 23,124 - BACOVA_00525 0.87 -0.6 23,124 - BACOVA_00525 0.87 +0.1 23,131 + BACOVA_00525 0.88 +2.4 23,138 + BACOVA_00525 0.89 +0.5 23,146 + BACOVA_00525 0.90 -0.5 23,198 + +0.8 23,199 - +1.0 23,213 + -0.8
Or see this region's nucleotide sequence