Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00240

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00239 and BACOVA_00240 are separated by 83 nucleotidesBACOVA_00240 and BACOVA_00241 are separated by 230 nucleotidesBACOVA_00241 and BACOVA_00242 are separated by 8 nucleotides BACOVA_00239: BACOVA_00239 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 11,464 to 15,468 _00239 BACOVA_00240: BACOVA_00240 - hypothetical protein, at 15,552 to 15,662 _00240 BACOVA_00241: BACOVA_00241 - hypothetical protein, at 15,893 to 16,042 _00241 BACOVA_00242: BACOVA_00242 - TonB-linked outer membrane protein, SusC/RagA family, at 16,051 to 19,170 _00242 Position (kb) 15 16Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 14.631 kb on + strand, within BACOVA_00239at 14.635 kb on - strand, within BACOVA_00239at 14.673 kb on + strand, within BACOVA_00239at 14.692 kb on - strand, within BACOVA_00239at 14.700 kb on + strand, within BACOVA_00239at 14.704 kb on - strand, within BACOVA_00239at 14.755 kb on - strand, within BACOVA_00239at 14.756 kb on + strand, within BACOVA_00239at 14.757 kb on - strand, within BACOVA_00239at 14.832 kb on - strand, within BACOVA_00239at 14.832 kb on - strand, within BACOVA_00239at 14.832 kb on - strand, within BACOVA_00239at 14.832 kb on - strand, within BACOVA_00239at 14.855 kb on + strand, within BACOVA_00239at 14.866 kb on - strand, within BACOVA_00239at 14.866 kb on - strand, within BACOVA_00239at 14.875 kb on - strand, within BACOVA_00239at 14.881 kb on - strand, within BACOVA_00239at 14.885 kb on + strand, within BACOVA_00239at 14.940 kb on + strand, within BACOVA_00239at 14.940 kb on + strand, within BACOVA_00239at 14.940 kb on + strand, within BACOVA_00239at 14.941 kb on - strand, within BACOVA_00239at 14.941 kb on - strand, within BACOVA_00239at 14.946 kb on + strand, within BACOVA_00239at 14.953 kb on - strand, within BACOVA_00239at 14.953 kb on - strand, within BACOVA_00239at 14.958 kb on + strand, within BACOVA_00239at 15.018 kb on + strand, within BACOVA_00239at 15.048 kb on - strand, within BACOVA_00239at 15.083 kb on - strandat 15.106 kb on + strandat 15.114 kb on + strandat 15.115 kb on - strandat 15.155 kb on + strandat 15.172 kb on - strandat 15.172 kb on - strandat 15.196 kb on - strandat 15.204 kb on + strandat 15.208 kb on - strandat 15.208 kb on - strandat 15.240 kb on + strandat 15.240 kb on + strandat 15.247 kb on - strandat 15.303 kb on - strandat 15.303 kb on - strandat 15.323 kb on + strandat 15.338 kb on - strandat 15.338 kb on - strandat 15.339 kb on + strandat 15.340 kb on - strandat 15.414 kb on + strandat 15.425 kb on - strandat 15.450 kb on - strandat 15.456 kb on + strandat 15.459 kb on - strandat 15.510 kb on + strandat 15.549 kb on - strandat 15.549 kb on - strandat 15.552 kb on - strandat 15.566 kb on + strand, within BACOVA_00240at 15.575 kb on - strand, within BACOVA_00240at 15.579 kb on - strand, within BACOVA_00240at 15.581 kb on - strand, within BACOVA_00240at 15.590 kb on + strand, within BACOVA_00240at 15.617 kb on - strand, within BACOVA_00240at 15.635 kb on - strand, within BACOVA_00240at 15.659 kb on - strandat 15.661 kb on - strandat 15.684 kb on + strandat 15.684 kb on + strandat 15.684 kb on + strandat 15.685 kb on - strandat 15.685 kb on - strandat 15.710 kb on + strandat 15.716 kb on + strandat 15.717 kb on - strandat 15.736 kb on + strandat 15.736 kb on + strandat 15.744 kb on + strandat 15.744 kb on + strandat 15.745 kb on - strandat 15.748 kb on - strandat 15.750 kb on - strandat 15.772 kb on + strandat 15.806 kb on + strandat 15.806 kb on + strandat 15.806 kb on + strandat 15.806 kb on + strandat 15.807 kb on - strandat 15.807 kb on - strandat 15.807 kb on - strandat 15.822 kb on + strandat 15.833 kb on + strandat 15.865 kb on - strandat 15.889 kb on - strandat 15.920 kb on - strand, within BACOVA_00241at 15.933 kb on - strand, within BACOVA_00241at 15.933 kb on - strand, within BACOVA_00241at 15.955 kb on - strand, within BACOVA_00241at 15.970 kb on - strand, within BACOVA_00241at 15.991 kb on + strand, within BACOVA_00241at 15.992 kb on - strand, within BACOVA_00241at 16.009 kb on - strand, within BACOVA_00241at 16.030 kb on - strandat 16.036 kb on - strandat 16.057 kb on + strandat 16.058 kb on - strandat 16.068 kb on + strandat 16.104 kb on + strandat 16.109 kb on + strandat 16.109 kb on + strandat 16.110 kb on - strandat 16.119 kb on - strandat 16.119 kb on - strandat 16.130 kb on + strandat 16.130 kb on + strandat 16.130 kb on + strandat 16.131 kb on - strandat 16.131 kb on - strandat 16.131 kb on - strandat 16.135 kb on - strandat 16.243 kb on - strandat 16.258 kb on - strandat 16.308 kb on + strandat 16.329 kb on - strandat 16.338 kb on - strandat 16.349 kb on + strandat 16.350 kb on - strandat 16.353 kb on + strandat 16.359 kb on + strandat 16.359 kb on + strandat 16.409 kb on + strand, within BACOVA_00242at 16.450 kb on - strand, within BACOVA_00242at 16.544 kb on - strand, within BACOVA_00242at 16.545 kb on + strand, within BACOVA_00242at 16.546 kb on - strand, within BACOVA_00242at 16.614 kb on + strand, within BACOVA_00242at 16.615 kb on - strand, within BACOVA_00242at 16.635 kb on - strand, within BACOVA_00242

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
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14,631 + BACOVA_00239 0.79 -2.2
14,635 - BACOVA_00239 0.79 -2.2
14,673 + BACOVA_00239 0.80 -1.4
14,692 - BACOVA_00239 0.81 -2.1
14,700 + BACOVA_00239 0.81 -0.1
14,704 - BACOVA_00239 0.81 -1.9
14,755 - BACOVA_00239 0.82 -0.5
14,756 + BACOVA_00239 0.82 -0.2
14,757 - BACOVA_00239 0.82 +0.2
14,832 - BACOVA_00239 0.84 -0.2
14,832 - BACOVA_00239 0.84 -0.3
14,832 - BACOVA_00239 0.84 -2.2
14,832 - BACOVA_00239 0.84 +1.8
14,855 + BACOVA_00239 0.85 +1.1
14,866 - BACOVA_00239 0.85 -1.5
14,866 - BACOVA_00239 0.85 -3.0
14,875 - BACOVA_00239 0.85 -2.4
14,881 - BACOVA_00239 0.85 +0.2
14,885 + BACOVA_00239 0.85 +0.5
14,940 + BACOVA_00239 0.87 +2.5
14,940 + BACOVA_00239 0.87 +1.5
14,940 + BACOVA_00239 0.87 +0.0
14,941 - BACOVA_00239 0.87 +2.1
14,941 - BACOVA_00239 0.87 -0.0
14,946 + BACOVA_00239 0.87 -1.2
14,953 - BACOVA_00239 0.87 -1.8
14,953 - BACOVA_00239 0.87 +1.4
14,958 + BACOVA_00239 0.87 +0.5
15,018 + BACOVA_00239 0.89 +2.3
15,048 - BACOVA_00239 0.89 -1.3
15,083 - -2.3
15,106 + -0.9
15,114 + +1.8
15,115 - +0.8
15,155 + +4.3
15,172 - -0.6
15,172 - +0.9
15,196 - -1.2
15,204 + -2.4
15,208 - -0.7
15,208 - -0.2
15,240 + +0.8
15,240 + +0.7
15,247 - +0.6
15,303 - +0.9
15,303 - -1.6
15,323 + -2.7
15,338 - +1.3
15,338 - -0.7
15,339 + -1.2
15,340 - -2.5
15,414 + -1.9
15,425 - -2.2
15,450 - -1.0
15,456 + +1.3
15,459 - -0.5
15,510 + -1.3
15,549 - -3.1
15,549 - +0.3
15,552 - -0.0
15,566 + BACOVA_00240 0.13 -1.1
15,575 - BACOVA_00240 0.21 +0.4
15,579 - BACOVA_00240 0.24 +0.1
15,581 - BACOVA_00240 0.26 -2.9
15,590 + BACOVA_00240 0.34 -0.6
15,617 - BACOVA_00240 0.59 +1.5
15,635 - BACOVA_00240 0.75 +1.3
15,659 - +0.6
15,661 - +1.4
15,684 + +2.7
15,684 + +1.3
15,684 + -0.2
15,685 - -3.0
15,685 - -1.4
15,710 + -2.1
15,716 + +0.7
15,717 - -2.6
15,736 + +2.0
15,736 + +1.9
15,744 + -0.3
15,744 + -0.7
15,745 - -1.2
15,748 - -2.3
15,750 - +3.1
15,772 + -0.3
15,806 + +1.6
15,806 + -0.2
15,806 + +0.5
15,806 + -0.2
15,807 - -0.2
15,807 - -1.1
15,807 - -1.5
15,822 + +0.7
15,833 + +0.0
15,865 - -1.8
15,889 - +1.1
15,920 - BACOVA_00241 0.18 -0.1
15,933 - BACOVA_00241 0.27 +1.8
15,933 - BACOVA_00241 0.27 +0.7
15,955 - BACOVA_00241 0.41 -2.0
15,970 - BACOVA_00241 0.51 -1.7
15,991 + BACOVA_00241 0.65 -1.9
15,992 - BACOVA_00241 0.66 +2.1
16,009 - BACOVA_00241 0.77 -0.2
16,030 - -1.9
16,036 - -0.7
16,057 + -0.3
16,058 - -0.1
16,068 + -0.9
16,104 + +0.4
16,109 + +1.3
16,109 + -1.2
16,110 - -2.0
16,119 - +0.4
16,119 - -1.3
16,130 + -0.1
16,130 + -1.0
16,130 + +0.2
16,131 - +0.4
16,131 - +0.3
16,131 - -1.0
16,135 - +1.7
16,243 - -0.6
16,258 - -0.5
16,308 + +0.2
16,329 - +0.5
16,338 - -0.9
16,349 + +1.4
16,350 - -2.5
16,353 + +0.9
16,359 + +1.5
16,359 + -2.3
16,409 + BACOVA_00242 0.11 -1.3
16,450 - BACOVA_00242 0.13 -1.4
16,544 - BACOVA_00242 0.16 +1.1
16,545 + BACOVA_00242 0.16 +1.1
16,546 - BACOVA_00242 0.16 -1.0
16,614 + BACOVA_00242 0.18 -3.2
16,615 - BACOVA_00242 0.18 -2.0
16,635 - BACOVA_00242 0.19 +0.2

Or see this region's nucleotide sequence