Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02977 and MPMX26_02978 are separated by 112 nucleotides MPMX26_02978 and MPMX26_02979 are separated by 356 nucleotides
MPMX26_02977: MPMX26_02977 - hypothetical protein, at 3,093,041 to 3,093,949
_02977
MPMX26_02978: MPMX26_02978 - Histidinol-phosphate aminotransferase, at 3,094,062 to 3,095,474
_02978
MPMX26_02979: MPMX26_02979 - Pantothenate precursors transporter PanS, at 3,095,831 to 3,096,793
_02979
Position (kb)
3094
3095
3096 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3093.461 kb on - strand, within MPMX26_02977 at 3094.139 kb on + strand at 3094.139 kb on + strand at 3094.139 kb on + strand at 3094.164 kb on + strand at 3094.169 kb on + strand at 3094.206 kb on + strand, within MPMX26_02978 at 3094.286 kb on + strand, within MPMX26_02978 at 3094.286 kb on + strand, within MPMX26_02978 at 3094.286 kb on + strand, within MPMX26_02978 at 3094.286 kb on + strand, within MPMX26_02978 at 3094.292 kb on + strand, within MPMX26_02978 at 3094.292 kb on + strand, within MPMX26_02978 at 3094.346 kb on + strand, within MPMX26_02978 at 3094.470 kb on + strand, within MPMX26_02978 at 3094.479 kb on + strand, within MPMX26_02978 at 3094.492 kb on + strand, within MPMX26_02978 at 3094.492 kb on + strand, within MPMX26_02978 at 3094.493 kb on + strand, within MPMX26_02978 at 3094.493 kb on + strand, within MPMX26_02978 at 3094.500 kb on - strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.515 kb on + strand, within MPMX26_02978 at 3094.523 kb on - strand, within MPMX26_02978 at 3094.523 kb on - strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.554 kb on + strand, within MPMX26_02978 at 3094.556 kb on + strand, within MPMX26_02978 at 3094.556 kb on + strand, within MPMX26_02978 at 3094.556 kb on + strand, within MPMX26_02978 at 3094.556 kb on + strand, within MPMX26_02978 at 3094.556 kb on + strand, within MPMX26_02978 at 3094.559 kb on + strand, within MPMX26_02978 at 3094.562 kb on + strand, within MPMX26_02978 at 3094.562 kb on - strand, within MPMX26_02978 at 3094.564 kb on - strand, within MPMX26_02978 at 3094.594 kb on + strand, within MPMX26_02978 at 3094.596 kb on + strand, within MPMX26_02978 at 3094.606 kb on + strand, within MPMX26_02978 at 3094.611 kb on + strand, within MPMX26_02978 at 3094.641 kb on + strand, within MPMX26_02978 at 3094.691 kb on + strand, within MPMX26_02978 at 3094.691 kb on + strand, within MPMX26_02978 at 3094.699 kb on - strand, within MPMX26_02978 at 3094.706 kb on + strand, within MPMX26_02978 at 3094.724 kb on + strand, within MPMX26_02978 at 3094.734 kb on + strand, within MPMX26_02978 at 3094.734 kb on + strand, within MPMX26_02978 at 3094.746 kb on + strand, within MPMX26_02978 at 3094.746 kb on + strand, within MPMX26_02978 at 3094.767 kb on + strand, within MPMX26_02978 at 3094.772 kb on + strand, within MPMX26_02978 at 3094.772 kb on + strand, within MPMX26_02978 at 3094.772 kb on + strand, within MPMX26_02978 at 3094.868 kb on + strand, within MPMX26_02978 at 3094.868 kb on + strand, within MPMX26_02978 at 3094.898 kb on + strand, within MPMX26_02978 at 3094.937 kb on + strand, within MPMX26_02978 at 3094.937 kb on + strand, within MPMX26_02978 at 3094.937 kb on + strand, within MPMX26_02978 at 3094.937 kb on + strand, within MPMX26_02978 at 3094.937 kb on + strand, within MPMX26_02978 at 3094.947 kb on + strand, within MPMX26_02978 at 3094.947 kb on + strand, within MPMX26_02978 at 3094.967 kb on + strand, within MPMX26_02978 at 3095.141 kb on + strand, within MPMX26_02978 at 3095.186 kb on + strand, within MPMX26_02978 at 3095.186 kb on + strand, within MPMX26_02978 at 3095.245 kb on - strand, within MPMX26_02978 at 3095.370 kb on - strand at 3095.394 kb on - strand at 3095.433 kb on + strand at 3095.447 kb on + strand at 3095.447 kb on + strand at 3095.455 kb on - strand at 3095.504 kb on - strand at 3095.570 kb on - strand at 3095.670 kb on - strand at 3095.678 kb on - strand at 3095.678 kb on - strand at 3095.701 kb on - strand at 3095.757 kb on - strand at 3095.776 kb on - strand at 3095.776 kb on - strand at 3095.928 kb on - strand, within MPMX26_02979 at 3095.951 kb on - strand, within MPMX26_02979 at 3095.988 kb on - strand, within MPMX26_02979 at 3095.995 kb on - strand, within MPMX26_02979 at 3095.995 kb on - strand, within MPMX26_02979 at 3095.995 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.035 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.101 kb on - strand, within MPMX26_02979 at 3096.149 kb on - strand, within MPMX26_02979 at 3096.149 kb on - strand, within MPMX26_02979 at 3096.187 kb on - strand, within MPMX26_02979 at 3096.187 kb on - strand, within MPMX26_02979 at 3096.203 kb on - strand, within MPMX26_02979 at 3096.215 kb on - strand, within MPMX26_02979 at 3096.215 kb on - strand, within MPMX26_02979 at 3096.220 kb on - strand, within MPMX26_02979 at 3096.220 kb on - strand, within MPMX26_02979 at 3096.222 kb on - strand, within MPMX26_02979 at 3096.224 kb on - strand, within MPMX26_02979 at 3096.227 kb on - strand, within MPMX26_02979 at 3096.234 kb on - strand, within MPMX26_02979 at 3096.264 kb on - strand, within MPMX26_02979 at 3096.281 kb on - strand, within MPMX26_02979 at 3096.290 kb on - strand, within MPMX26_02979 at 3096.305 kb on - strand, within MPMX26_02979 at 3096.349 kb on - strand, within MPMX26_02979 at 3096.349 kb on - strand, within MPMX26_02979 at 3096.388 kb on - strand, within MPMX26_02979 at 3096.394 kb on - strand, within MPMX26_02979 at 3096.407 kb on - strand, within MPMX26_02979 at 3096.413 kb on - strand, within MPMX26_02979 at 3096.428 kb on - strand, within MPMX26_02979 at 3096.428 kb on - strand, within MPMX26_02979 at 3096.428 kb on - strand, within MPMX26_02979 at 3096.433 kb on - strand, within MPMX26_02979
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 3,093,461 - MPMX26_02977 0.46 -1.2 3,094,139 + +0.0 3,094,139 + -0.6 3,094,139 + -0.6 3,094,164 + +0.3 3,094,169 + +0.6 3,094,206 + MPMX26_02978 0.10 +0.6 3,094,286 + MPMX26_02978 0.16 -0.0 3,094,286 + MPMX26_02978 0.16 -0.4 3,094,286 + MPMX26_02978 0.16 +0.3 3,094,286 + MPMX26_02978 0.16 -0.1 3,094,292 + MPMX26_02978 0.16 -0.2 3,094,292 + MPMX26_02978 0.16 -0.3 3,094,346 + MPMX26_02978 0.20 +0.2 3,094,470 + MPMX26_02978 0.29 -0.6 3,094,479 + MPMX26_02978 0.30 +0.4 3,094,492 + MPMX26_02978 0.30 -0.3 3,094,492 + MPMX26_02978 0.30 -0.2 3,094,493 + MPMX26_02978 0.31 +0.1 3,094,493 + MPMX26_02978 0.31 -1.0 3,094,500 - MPMX26_02978 0.31 +0.8 3,094,515 + MPMX26_02978 0.32 +0.9 3,094,515 + MPMX26_02978 0.32 -1.0 3,094,515 + MPMX26_02978 0.32 -0.3 3,094,515 + MPMX26_02978 0.32 +1.3 3,094,515 + MPMX26_02978 0.32 +1.8 3,094,515 + MPMX26_02978 0.32 +0.3 3,094,515 + MPMX26_02978 0.32 +0.0 3,094,515 + MPMX26_02978 0.32 +0.0 3,094,515 + MPMX26_02978 0.32 +0.1 3,094,515 + MPMX26_02978 0.32 -0.3 3,094,515 + MPMX26_02978 0.32 +0.5 3,094,515 + MPMX26_02978 0.32 +0.5 3,094,515 + MPMX26_02978 0.32 -1.1 3,094,515 + MPMX26_02978 0.32 -0.4 3,094,523 - MPMX26_02978 0.33 -0.7 3,094,523 - MPMX26_02978 0.33 +0.8 3,094,554 + MPMX26_02978 0.35 -0.2 3,094,554 + MPMX26_02978 0.35 +0.3 3,094,554 + MPMX26_02978 0.35 +0.9 3,094,554 + MPMX26_02978 0.35 -0.3 3,094,554 + MPMX26_02978 0.35 +0.9 3,094,554 + MPMX26_02978 0.35 +1.1 3,094,554 + MPMX26_02978 0.35 -0.5 3,094,554 + MPMX26_02978 0.35 -0.8 3,094,554 + MPMX26_02978 0.35 -0.0 3,094,556 + MPMX26_02978 0.35 -0.7 3,094,556 + MPMX26_02978 0.35 +0.1 3,094,556 + MPMX26_02978 0.35 -0.0 3,094,556 + MPMX26_02978 0.35 -0.1 3,094,556 + MPMX26_02978 0.35 -0.6 3,094,559 + MPMX26_02978 0.35 +0.1 3,094,562 + MPMX26_02978 0.35 -0.6 3,094,562 - MPMX26_02978 0.35 -0.1 3,094,564 - MPMX26_02978 0.36 +2.0 3,094,594 + MPMX26_02978 0.38 +0.4 3,094,596 + MPMX26_02978 0.38 +1.4 3,094,606 + MPMX26_02978 0.38 +1.2 3,094,611 + MPMX26_02978 0.39 -0.8 3,094,641 + MPMX26_02978 0.41 -0.5 3,094,691 + MPMX26_02978 0.45 -1.2 3,094,691 + MPMX26_02978 0.45 +0.3 3,094,699 - MPMX26_02978 0.45 +1.0 3,094,706 + MPMX26_02978 0.46 +0.2 3,094,724 + MPMX26_02978 0.47 +0.6 3,094,734 + MPMX26_02978 0.48 +0.0 3,094,734 + MPMX26_02978 0.48 -0.1 3,094,746 + MPMX26_02978 0.48 -0.6 3,094,746 + MPMX26_02978 0.48 +0.4 3,094,767 + MPMX26_02978 0.50 +0.2 3,094,772 + MPMX26_02978 0.50 +0.2 3,094,772 + MPMX26_02978 0.50 -0.9 3,094,772 + MPMX26_02978 0.50 -0.2 3,094,868 + MPMX26_02978 0.57 -0.8 3,094,868 + MPMX26_02978 0.57 -0.5 3,094,898 + MPMX26_02978 0.59 +1.0 3,094,937 + MPMX26_02978 0.62 +0.7 3,094,937 + MPMX26_02978 0.62 +0.1 3,094,937 + MPMX26_02978 0.62 -0.6 3,094,937 + MPMX26_02978 0.62 -2.4 3,094,937 + MPMX26_02978 0.62 +0.1 3,094,947 + MPMX26_02978 0.63 +0.8 3,094,947 + MPMX26_02978 0.63 -0.4 3,094,967 + MPMX26_02978 0.64 +0.1 3,095,141 + MPMX26_02978 0.76 -0.2 3,095,186 + MPMX26_02978 0.80 -0.1 3,095,186 + MPMX26_02978 0.80 +0.3 3,095,245 - MPMX26_02978 0.84 +0.1 3,095,370 - +0.2 3,095,394 - -0.4 3,095,433 + -0.2 3,095,447 + -0.5 3,095,447 + +0.0 3,095,455 - -0.0 3,095,504 - +0.7 3,095,570 - +0.7 3,095,670 - -0.3 3,095,678 - +0.6 3,095,678 - +0.1 3,095,701 - -0.6 3,095,757 - +0.3 3,095,776 - -0.5 3,095,776 - -1.0 3,095,928 - MPMX26_02979 0.10 +0.7 3,095,951 - MPMX26_02979 0.12 +0.4 3,095,988 - MPMX26_02979 0.16 -0.9 3,095,995 - MPMX26_02979 0.17 +1.6 3,095,995 - MPMX26_02979 0.17 +0.8 3,095,995 - MPMX26_02979 0.17 -0.3 3,096,035 - MPMX26_02979 0.21 +0.1 3,096,035 - MPMX26_02979 0.21 -0.5 3,096,035 - MPMX26_02979 0.21 +0.1 3,096,035 - MPMX26_02979 0.21 +2.0 3,096,035 - MPMX26_02979 0.21 -0.8 3,096,035 - MPMX26_02979 0.21 +0.6 3,096,101 - MPMX26_02979 0.28 -0.4 3,096,101 - MPMX26_02979 0.28 +0.1 3,096,101 - MPMX26_02979 0.28 +0.3 3,096,101 - MPMX26_02979 0.28 -1.0 3,096,101 - MPMX26_02979 0.28 +0.2 3,096,101 - MPMX26_02979 0.28 -0.3 3,096,101 - MPMX26_02979 0.28 -0.3 3,096,101 - MPMX26_02979 0.28 -0.3 3,096,101 - MPMX26_02979 0.28 -0.3 3,096,101 - MPMX26_02979 0.28 +0.6 3,096,149 - MPMX26_02979 0.33 -0.1 3,096,149 - MPMX26_02979 0.33 -0.6 3,096,187 - MPMX26_02979 0.37 -0.3 3,096,187 - MPMX26_02979 0.37 -0.4 3,096,203 - MPMX26_02979 0.39 +0.2 3,096,215 - MPMX26_02979 0.40 -0.8 3,096,215 - MPMX26_02979 0.40 -1.1 3,096,220 - MPMX26_02979 0.40 +0.8 3,096,220 - MPMX26_02979 0.40 +0.0 3,096,222 - MPMX26_02979 0.41 -0.9 3,096,224 - MPMX26_02979 0.41 -0.3 3,096,227 - MPMX26_02979 0.41 +1.7 3,096,234 - MPMX26_02979 0.42 +0.1 3,096,264 - MPMX26_02979 0.45 -0.4 3,096,281 - MPMX26_02979 0.47 -0.0 3,096,290 - MPMX26_02979 0.48 +0.4 3,096,305 - MPMX26_02979 0.49 -0.2 3,096,349 - MPMX26_02979 0.54 +0.4 3,096,349 - MPMX26_02979 0.54 +0.1 3,096,388 - MPMX26_02979 0.58 -0.0 3,096,394 - MPMX26_02979 0.58 -0.1 3,096,407 - MPMX26_02979 0.60 +0.3 3,096,413 - MPMX26_02979 0.60 -0.2 3,096,428 - MPMX26_02979 0.62 +0.2 3,096,428 - MPMX26_02979 0.62 -0.3 3,096,428 - MPMX26_02979 0.62 -0.0 3,096,433 - MPMX26_02979 0.63 +1.0
Or see this region's nucleotide sequence