Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01289

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01288 and MPMX26_01289 are separated by 329 nucleotidesMPMX26_01289 and MPMX26_01290 are separated by 4 nucleotides MPMX26_01288: MPMX26_01288 - hypothetical protein, at 1,363,635 to 1,364,213 _01288 MPMX26_01289: MPMX26_01289 - 2-methylisocitrate lyase, at 1,364,543 to 1,365,427 _01289 MPMX26_01290: MPMX26_01290 - 2-methylcitrate synthase, at 1,365,432 to 1,366,574 _01290 Position (kb) 1364 1365 1366Strain fitness (log2 ratio) -3 -2 -1 0 1at 1363.800 kb on - strand, within MPMX26_01288at 1363.853 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.902 kb on - strand, within MPMX26_01288at 1363.913 kb on - strand, within MPMX26_01288

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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1,363,800 - MPMX26_01288 0.28 -0.4
1,363,853 - MPMX26_01288 0.38 +0.2
1,363,902 - MPMX26_01288 0.46 +0.1
1,363,902 - MPMX26_01288 0.46 -2.8
1,363,902 - MPMX26_01288 0.46 -0.3
1,363,902 - MPMX26_01288 0.46 -1.7
1,363,902 - MPMX26_01288 0.46 -1.2
1,363,902 - MPMX26_01288 0.46 +0.7
1,363,902 - MPMX26_01288 0.46 -1.7
1,363,902 - MPMX26_01288 0.46 +0.7
1,363,902 - MPMX26_01288 0.46 +0.0
1,363,902 - MPMX26_01288 0.46 +1.4
1,363,902 - MPMX26_01288 0.46 +0.3
1,363,913 - MPMX26_01288 0.48 +0.2

Or see this region's nucleotide sequence