Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4965

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,981,247	-		GFF4963	0.36	+0.8
1,981,247	-		GFF4963	0.36	+0.3
1,981,247	-		GFF4963	0.36	-0.7
1,981,405	+		GFF4963	0.78	+0.4
1,981,406	-		GFF4963	0.78	+0.5
1,981,406	-		GFF4963	0.78	+0.1
1,981,406	-		GFF4963	0.78	-0.6
1,981,406	-		GFF4963	0.78	-0.6
1,981,515	-				-0.0
1,981,839	+		GFF4964	0.52	+1.6
1,982,071	+				+0.1
1,982,255	+		GFF4965	0.57	-0.2
1,982,255	+		GFF4965	0.57	+0.0
1,982,255	+		GFF4965	0.57	+0.5
1,982,255	+		GFF4965	0.57	+0.1
1,982,256	-		GFF4965	0.57	+0.3
1,982,256	-		GFF4965	0.57	-0.5
1,982,256	-		GFF4965	0.57	+1.1
1,982,291	+		GFF4965	0.74	-0.6
1,982,291	+		GFF4965	0.74	+1.0
1,982,292	-		GFF4965	0.74	-0.3
1,982,292	-		GFF4965	0.74	-0.0
1,982,292	-		GFF4965	0.74	-0.3
1,982,518	+		GFF4966	0.21	-0.0
1,982,518	+		GFF4966	0.21	+0.5
1,982,518	+		GFF4966	0.21	+0.1
1,982,519	-		GFF4966	0.21	-0.0
1,982,519	-		GFF4966	0.21	+0.4
1,982,519	-		GFF4966	0.21	+0.9
1,982,525	-		GFF4966	0.22	-0.1
1,982,525	-		GFF4966	0.22	-0.7
1,982,617	+		GFF4966	0.33	-1.2
1,982,618	-		GFF4966	0.33	+0.3
1,982,618	-		GFF4966	0.33	-0.2
1,982,618	-		GFF4966	0.33	-0.9
1,982,677	+		GFF4966	0.40	+0.3
1,982,677	+		GFF4966	0.40	-1.5
1,982,678	-		GFF4966	0.40	-0.0
1,983,004	+		GFF4966	0.80	-0.5
1,983,004	+		GFF4966	0.80	-1.1
1,983,005	-		GFF4966	0.80	-0.1
1,983,005	-		GFF4966	0.80	+0.0