Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4645

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,593,440	+		GFF4644	0.30	+0.7
1,593,441	-		GFF4644	0.30	-0.5
1,593,441	-		GFF4644	0.30	+0.3
1,593,512	-		GFF4644	0.40	+0.5
1,593,754	+		GFF4644	0.71	-0.4
1,593,791	+		GFF4644	0.76	+1.2
1,594,069	+				+1.6
1,594,145	+				+0.2
1,594,173	-				+0.8
1,594,240	-				-0.7
1,594,373	+				+0.1
1,594,373	+				-0.1
1,594,450	+		GFF4645	0.12	+0.3
1,594,450	+		GFF4645	0.12	-0.1
1,594,450	+		GFF4645	0.12	+0.4
1,594,451	-		GFF4645	0.12	-0.1
1,594,451	-		GFF4645	0.12	+0.2
1,594,494	+		GFF4645	0.16	+0.2
1,594,494	+		GFF4645	0.16	+0.0
1,594,494	+		GFF4645	0.16	+0.3
1,594,494	+		GFF4645	0.16	+0.6
1,594,494	+		GFF4645	0.16	+0.1
1,594,495	-		GFF4645	0.16	+1.9
1,594,495	-		GFF4645	0.16	-0.2
1,594,495	-		GFF4645	0.16	-0.2
1,594,495	-		GFF4645	0.16	-0.3
1,594,621	+		GFF4645	0.27	+0.8
1,594,621	+		GFF4645	0.27	+0.6
1,594,621	+		GFF4645	0.27	-0.2
1,594,622	-		GFF4645	0.27	+0.2
1,594,690	+		GFF4645	0.32	+0.0
1,594,859	+		GFF4645	0.46	-1.0
1,594,859	+		GFF4645	0.46	+0.8
1,594,859	+		GFF4645	0.46	+0.3
1,594,860	-		GFF4645	0.46	-0.2
1,594,860	-		GFF4645	0.46	+0.1
1,594,860	-		GFF4645	0.46	-0.1
1,594,860	-		GFF4645	0.46	-0.3
1,594,860	-		GFF4645	0.46	+1.0
1,594,941	+		GFF4645	0.53	+0.8
1,595,007	+		GFF4645	0.59	-0.2
1,595,008	-		GFF4645	0.59	+1.7
1,595,427	+				+0.3
1,595,663	-				+0.1
1,595,762	+				+0.1
1,595,762	+				-0.6
1,595,763	-				+0.3
1,595,763	-				-0.5
1,595,763	-				+0.8
1,595,772	+				+0.2
1,595,772	+				-1.3
1,595,772	+				-0.7
1,595,772	+				+0.4
1,595,773	-				-0.0
1,595,773	-				-1.2
1,595,789	-				+0.5
1,595,789	-				+0.6
1,595,790	+				-0.2
1,595,790	+				-1.5
1,595,791	-				+0.8
1,595,791	-				-0.4
1,595,791	-				+0.3
1,595,795	-				+0.2
1,595,922	+				+0.8
1,595,922	+				+0.4
1,595,922	+				-0.7
1,595,923	-				+0.6
1,595,923	-				-0.1
1,595,923	-				+0.2
1,595,923	-				+0.2
1,595,923	-				-0.1
1,595,926	+				+1.0
1,595,926	+				+0.3
1,595,926	+				-0.4
1,595,926	+				-0.7
1,595,926	+				+0.1
1,595,926	+				-0.1
1,595,926	+				-1.1
1,595,926	+				+0.7
1,595,927	-				-0.0
1,595,927	-				+0.5
1,595,927	-				+0.1
1,595,927	-				-0.1
1,595,927	-				+0.1
1,595,927	-				-0.2
1,595,939	+				-0.4
1,595,940	-				+0.6
1,595,970	+				+0.8
1,595,971	-				-0.7
1,595,991	-				+0.2
1,596,311	+				-0.2
1,596,312	-				-0.8
1,596,335	+				+0.6
1,596,335	+				-0.5
1,596,438	-				-0.6
1,596,438	-				+0.2
1,596,449	-				+0.6
1,596,449	-				+0.0