Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3220

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
101,078	-		GFF3219	0.61	+1.3
101,348	-		GFF3219	0.85	-0.2
101,480	-				+1.5
101,873	-				+0.2
102,035	+				+1.2
102,063	-		GFF3221	0.10	-0.0
102,063	-		GFF3221	0.10	-0.1
102,146	+		GFF3221	0.17	-0.1
102,147	-		GFF3221	0.17	-0.2
102,521	+		GFF3221	0.48	+0.4
102,522	-		GFF3221	0.48	+0.4
102,522	-		GFF3221	0.48	+0.2
102,581	+		GFF3221	0.53	-0.0
102,582	-		GFF3221	0.53	-1.1
102,587	+		GFF3221	0.54	+0.3
102,630	-		GFF3221	0.57	+2.1