Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2877

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
464,533	+		GFF2876	0.55	+0.0
464,534	-		GFF2876	0.55	+0.7
464,611	+		GFF2876	0.61	-0.3
464,809	+		GFF2876	0.77	+0.4
464,809	+		GFF2876	0.77	+0.6
464,810	-		GFF2876	0.78	+0.3
465,229	+		GFF2877	0.15	+0.7
465,661	+		GFF2877	0.68	+0.8
465,662	-		GFF2877	0.68	+0.5
465,986	-				-0.1
465,986	-				+0.9
465,986	-				-0.5
466,037	+				+0.3
466,085	+				+0.9
466,085	+				-0.1
466,668	-		GFF2878	0.63	+0.3
466,668	-		GFF2878	0.63	-2.2
466,668	-		GFF2878	0.63	+0.2
466,844	+		GFF2878	0.83	+0.9
466,892	+		GFF2878	0.88	+0.1
466,892	+		GFF2878	0.88	+0.1