Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2332

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,216,386	+		GFF2331	0.12	+1.2
1,216,387	-		GFF2331	0.12	-0.9
1,216,387	-		GFF2331	0.12	-0.3
1,216,794	-		GFF2331	0.51	-0.0
1,216,794	-		GFF2331	0.51	+0.9
1,216,794	-		GFF2331	0.51	-0.4
1,216,949	+		GFF2331	0.66	-0.1
1,216,949	+		GFF2331	0.66	-0.7
1,216,949	+		GFF2331	0.66	-2.2
1,216,950	-		GFF2331	0.66	-0.9
1,217,536	+		GFF2332	0.33	-0.4
1,217,720	+		GFF2332	0.59	+0.1
1,217,734	+		GFF2332	0.61	-0.4
1,217,734	+		GFF2332	0.61	-0.2
1,217,735	-		GFF2332	0.61	+0.5
1,217,735	-		GFF2332	0.61	-1.4
1,217,735	-		GFF2332	0.61	-0.3
1,217,812	+		GFF2332	0.72	-0.2
1,217,813	-		GFF2332	0.72	-0.1
1,217,813	-		GFF2332	0.72	+0.7
1,218,027	+				+1.1
1,218,027	+				+0.8
1,218,090	+		GFF2333	0.11	+0.2
1,218,090	+		GFF2333	0.11	+0.2
1,218,091	-		GFF2333	0.11	-0.1
1,218,219	+		GFF2333	0.30	-0.8
1,218,220	-		GFF2333	0.30	-0.9
1,218,220	-		GFF2333	0.30	+0.1
1,218,220	-		GFF2333	0.30	+0.4
1,218,220	-		GFF2333	0.30	-0.8
1,218,220	-		GFF2333	0.30	-0.1
1,218,546	-		GFF2333	0.80	+0.8
1,218,701	+				-0.2
1,218,701	+				+0.2
1,218,702	-				+0.9
1,218,702	-				+0.6
1,218,702	-				+0.5
1,218,702	-				-0.3
1,218,702	-				-0.1
1,218,702	-				+0.5
1,218,702	-				-1.3
1,218,793	+				+0.3
1,218,794	-				+0.2
1,218,881	+				+0.0
1,218,881	+				-0.1
1,218,916	+				-0.1
1,218,916	+				-0.2
1,218,953	-				-0.5
1,218,953	-				+0.2
1,218,977	+				-0.2
1,218,978	-				+0.2