Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2256

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,138,939	+				-0.2
1,138,939	+				+0.3
1,138,939	+				+0.2
1,138,940	-				-0.5
1,139,018	-		GFF2255	0.17	+0.0
1,139,036	-		GFF2255	0.19	+0.5
1,139,266	+		GFF2255	0.48	+0.0
1,139,440	+		GFF2255	0.70	+0.5
1,139,440	+		GFF2255	0.70	+0.1
1,139,440	+		GFF2255	0.70	-0.5
1,139,440	+		GFF2255	0.70	+0.9
1,139,441	-		GFF2255	0.70	-0.1
1,139,441	-		GFF2255	0.70	-0.4
1,139,441	-		GFF2255	0.70	+0.1
1,139,618	-				-0.4
1,139,891	+		GFF2256	0.16	-0.5
1,139,891	+		GFF2256	0.16	-0.7
1,139,891	+		GFF2256	0.16	+0.7
1,139,891	+		GFF2256	0.16	+0.5
1,139,892	-		GFF2256	0.16	-0.6
1,139,892	-		GFF2256	0.16	+0.5
1,139,892	-		GFF2256	0.16	+0.3
1,139,892	-		GFF2256	0.16	+2.1
1,139,894	+		GFF2256	0.16	+0.4
1,139,895	-		GFF2256	0.16	+0.3
1,139,895	-		GFF2256	0.16	+1.2
1,140,287	+		GFF2256	0.55	-1.8
1,140,287	+		GFF2256	0.55	+0.2
1,140,452	+		GFF2256	0.71	-0.1
1,140,452	+		GFF2256	0.71	+0.4
1,140,452	+		GFF2256	0.71	+0.5
1,140,453	-		GFF2256	0.71	+0.3
1,140,453	-		GFF2256	0.71	+0.0
1,140,656	+				-0.4
1,140,657	-				-1.3
1,140,657	-				-1.1
1,140,657	-				-0.9
1,140,743	+				+0.2
1,140,744	-				-0.2
1,140,847	+				-0.3
1,140,847	+				-0.1
1,140,847	+				+0.1
1,140,847	+				-0.4
1,140,848	-				+0.2
1,141,561	+				-0.4
1,141,561	+				-0.3
1,141,561	+				-0.2
1,141,561	+				-1.7
1,141,562	-				+0.3
1,141,562	-				-0.2
1,141,562	-				-0.4