Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2134

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,022,455	+		GFF2133	0.29	-0.1
1,022,494	+		GFF2133	0.31	-0.3
1,022,698	+		GFF2133	0.46	+0.2
1,022,698	+		GFF2133	0.46	-0.2
1,022,699	-		GFF2133	0.46	-0.4
1,022,699	-		GFF2133	0.46	-1.4
1,022,699	-		GFF2133	0.46	-0.4
1,022,806	+		GFF2133	0.53	-0.6
1,022,882	-		GFF2133	0.59	+0.4
1,022,882	-		GFF2133	0.59	-0.0
1,023,097	+		GFF2133	0.74	-0.9
1,023,098	-		GFF2133	0.74	-0.1
1,023,215	-		GFF2133	0.82	+0.1
1,023,215	-		GFF2133	0.82	+0.1
1,023,246	-		GFF2133	0.84	-0.2
1,023,361	+				-0.3
1,023,361	+				+0.0
1,023,693	-		GFF2134	0.21	+0.6
1,023,797	+		GFF2134	0.29	+0.6
1,023,914	+		GFF2134	0.39	-0.3
1,023,914	+		GFF2134	0.39	+0.5
1,023,914	+		GFF2134	0.39	+0.1
1,024,094	+		GFF2134	0.55	-1.8
1,024,095	-		GFF2134	0.55	+0.0
1,024,181	+		GFF2134	0.62	-0.1
1,024,182	-		GFF2134	0.62	-1.8
1,024,182	-		GFF2134	0.62	+0.4
1,024,226	+		GFF2134	0.66	+0.2
1,024,226	+		GFF2134	0.66	-0.6
1,024,232	+		GFF2134	0.66	+0.2
1,024,232	+		GFF2134	0.66	+0.7
1,024,232	+		GFF2134	0.66	-0.8
1,024,232	+		GFF2134	0.66	-0.1
1,024,233	-		GFF2134	0.67	-0.1
1,024,233	-		GFF2134	0.67	-0.2
1,024,233	-		GFF2134	0.67	-1.2
1,024,747	+				+0.2
1,025,134	+		GFF2135	0.30	-0.4
1,025,134	+		GFF2135	0.30	-0.1
1,025,134	+		GFF2135	0.30	-1.2
1,025,134	+		GFF2135	0.30	+1.2
1,025,134	+		GFF2135	0.30	-1.0
1,025,134	+		GFF2135	0.30	+0.6
1,025,135	-		GFF2135	0.31	-1.1
1,025,188	+		GFF2135	0.34	-0.1
1,025,189	-		GFF2135	0.34	-0.8
1,025,189	-		GFF2135	0.34	+0.1
1,025,189	-		GFF2135	0.34	+0.0
1,025,617	+		GFF2135	0.60	-0.5