Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02343 and MPMX26_02344 are separated by 39 nucleotides MPMX26_02344 and MPMX26_02345 are separated by 179 nucleotides MPMX26_02345 and MPMX26_02346 are separated by 158 nucleotides
MPMX26_02343: MPMX26_02343 - hypothetical protein, at 2,418,537 to 2,419,538
_02343
MPMX26_02344: MPMX26_02344 - Ferric enterobactin receptor, at 2,419,578 to 2,421,785
_02344
MPMX26_02345: MPMX26_02345 - Fe/S biogenesis protein NfuA, at 2,421,965 to 2,422,603
_02345
MPMX26_02346: MPMX26_02346 - Rhomboid protease GlpG, at 2,422,762 to 2,423,382
_02346
Position (kb)
2419
2420
2421
2422 Strain fitness (log2 ratio)
-1
0
1 at 2418.608 kb on + strand at 2418.782 kb on + strand, within MPMX26_02343 at 2418.954 kb on + strand, within MPMX26_02343 at 2419.117 kb on + strand, within MPMX26_02343 at 2419.155 kb on + strand, within MPMX26_02343 at 2419.199 kb on + strand, within MPMX26_02343 at 2419.199 kb on + strand, within MPMX26_02343 at 2419.230 kb on + strand, within MPMX26_02343 at 2419.230 kb on + strand, within MPMX26_02343 at 2419.230 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.241 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.323 kb on + strand, within MPMX26_02343 at 2419.328 kb on + strand, within MPMX26_02343 at 2419.329 kb on + strand, within MPMX26_02343 at 2419.330 kb on + strand, within MPMX26_02343 at 2419.377 kb on + strand, within MPMX26_02343 at 2419.436 kb on + strand, within MPMX26_02343 at 2419.448 kb on + strand at 2419.475 kb on + strand at 2419.496 kb on + strand at 2419.496 kb on + strand at 2419.773 kb on - strand at 2419.773 kb on - strand at 2419.979 kb on - strand, within MPMX26_02344 at 2419.989 kb on - strand, within MPMX26_02344 at 2421.278 kb on - strand, within MPMX26_02344 at 2421.948 kb on - strand at 2421.964 kb on - strand at 2421.989 kb on - strand at 2421.989 kb on - strand at 2421.998 kb on - strand at 2422.000 kb on - strand at 2422.000 kb on - strand at 2422.005 kb on - strand at 2422.006 kb on + strand at 2422.022 kb on - strand at 2422.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 2,418,608 + +1.3 2,418,782 + MPMX26_02343 0.24 +0.5 2,418,954 + MPMX26_02343 0.42 -0.5 2,419,117 + MPMX26_02343 0.58 +0.2 2,419,155 + MPMX26_02343 0.62 +0.6 2,419,199 + MPMX26_02343 0.66 +0.1 2,419,199 + MPMX26_02343 0.66 +1.0 2,419,230 + MPMX26_02343 0.69 +0.3 2,419,230 + MPMX26_02343 0.69 +0.2 2,419,230 + MPMX26_02343 0.69 -0.8 2,419,241 + MPMX26_02343 0.70 -0.8 2,419,241 + MPMX26_02343 0.70 -0.0 2,419,241 + MPMX26_02343 0.70 -0.4 2,419,241 + MPMX26_02343 0.70 -0.1 2,419,241 + MPMX26_02343 0.70 +0.2 2,419,241 + MPMX26_02343 0.70 +0.3 2,419,323 + MPMX26_02343 0.78 +0.4 2,419,323 + MPMX26_02343 0.78 +0.3 2,419,323 + MPMX26_02343 0.78 +0.1 2,419,323 + MPMX26_02343 0.78 +0.4 2,419,323 + MPMX26_02343 0.78 +0.1 2,419,323 + MPMX26_02343 0.78 -0.2 2,419,323 + MPMX26_02343 0.78 -0.0 2,419,328 + MPMX26_02343 0.79 +0.9 2,419,329 + MPMX26_02343 0.79 +0.2 2,419,330 + MPMX26_02343 0.79 +0.2 2,419,377 + MPMX26_02343 0.84 -0.8 2,419,436 + MPMX26_02343 0.90 -0.2 2,419,448 + +0.5 2,419,475 + +0.5 2,419,496 + +0.5 2,419,496 + +0.1 2,419,773 - -0.6 2,419,773 - +0.9 2,419,979 - MPMX26_02344 0.18 +0.1 2,419,989 - MPMX26_02344 0.19 -1.3 2,421,278 - MPMX26_02344 0.77 -1.3 2,421,948 - +0.3 2,421,964 - -0.0 2,421,989 - +0.1 2,421,989 - +0.1 2,421,998 - -0.4 2,422,000 - -0.7 2,422,000 - -0.4 2,422,005 - -0.5 2,422,006 + -0.5 2,422,022 - -0.4 2,422,022 - +0.0
Or see this region's nucleotide sequence