Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01293 and MPMX26_01294 are separated by 339 nucleotides MPMX26_01294 and MPMX26_01295 are separated by 58 nucleotides MPMX26_01295 and MPMX26_01296 are separated by 77 nucleotides
MPMX26_01293: MPMX26_01293 - Sensory histidine kinase/phosphatase NtrB, at 1,368,934 to 1,370,043
_01293
MPMX26_01294: MPMX26_01294 - Ribosomal protein S12 methylthiotransferase RimO, at 1,370,383 to 1,371,726
_01294
MPMX26_01295: MPMX26_01295 - Uridylate kinase, at 1,371,785 to 1,372,513
_01295
MPMX26_01296: MPMX26_01296 - Ribosome-recycling factor, at 1,372,591 to 1,373,145
_01296
Position (kb)
1370
1371
1372 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1369.407 kb on - strand, within MPMX26_01293 at 1369.416 kb on - strand, within MPMX26_01293 at 1369.613 kb on - strand, within MPMX26_01293 at 1369.813 kb on - strand, within MPMX26_01293 at 1369.813 kb on - strand, within MPMX26_01293 at 1369.932 kb on - strand, within MPMX26_01293 at 1370.001 kb on - strand at 1370.362 kb on + strand at 1370.548 kb on + strand, within MPMX26_01294 at 1370.548 kb on + strand, within MPMX26_01294 at 1370.548 kb on + strand, within MPMX26_01294 at 1370.707 kb on + strand, within MPMX26_01294 at 1370.715 kb on + strand, within MPMX26_01294 at 1370.725 kb on + strand, within MPMX26_01294 at 1370.728 kb on + strand, within MPMX26_01294 at 1370.764 kb on + strand, within MPMX26_01294 at 1370.810 kb on + strand, within MPMX26_01294 at 1370.818 kb on + strand, within MPMX26_01294 at 1370.818 kb on + strand, within MPMX26_01294 at 1370.829 kb on + strand, within MPMX26_01294 at 1370.831 kb on + strand, within MPMX26_01294 at 1370.843 kb on + strand, within MPMX26_01294 at 1370.848 kb on + strand, within MPMX26_01294 at 1370.866 kb on + strand, within MPMX26_01294 at 1370.888 kb on + strand, within MPMX26_01294 at 1370.911 kb on + strand, within MPMX26_01294 at 1370.911 kb on + strand, within MPMX26_01294 at 1370.955 kb on + strand, within MPMX26_01294 at 1370.959 kb on + strand, within MPMX26_01294 at 1370.960 kb on + strand, within MPMX26_01294 at 1370.985 kb on + strand, within MPMX26_01294 at 1371.039 kb on + strand, within MPMX26_01294 at 1371.039 kb on + strand, within MPMX26_01294 at 1371.046 kb on + strand, within MPMX26_01294 at 1371.046 kb on + strand, within MPMX26_01294 at 1371.046 kb on + strand, within MPMX26_01294 at 1371.046 kb on + strand, within MPMX26_01294 at 1371.046 kb on + strand, within MPMX26_01294 at 1371.078 kb on + strand, within MPMX26_01294 at 1371.084 kb on + strand, within MPMX26_01294 at 1371.084 kb on + strand, within MPMX26_01294 at 1371.084 kb on + strand, within MPMX26_01294 at 1371.084 kb on + strand, within MPMX26_01294 at 1371.084 kb on + strand, within MPMX26_01294 at 1371.090 kb on + strand, within MPMX26_01294 at 1371.100 kb on + strand, within MPMX26_01294 at 1371.112 kb on + strand, within MPMX26_01294 at 1371.112 kb on + strand, within MPMX26_01294 at 1371.112 kb on + strand, within MPMX26_01294 at 1371.112 kb on + strand, within MPMX26_01294 at 1371.132 kb on + strand, within MPMX26_01294 at 1371.132 kb on + strand, within MPMX26_01294 at 1371.138 kb on + strand, within MPMX26_01294 at 1371.138 kb on + strand, within MPMX26_01294 at 1371.138 kb on + strand, within MPMX26_01294 at 1371.184 kb on + strand, within MPMX26_01294 at 1371.184 kb on + strand, within MPMX26_01294 at 1371.203 kb on + strand, within MPMX26_01294 at 1371.339 kb on + strand, within MPMX26_01294 at 1371.349 kb on + strand, within MPMX26_01294 at 1371.357 kb on + strand, within MPMX26_01294 at 1371.371 kb on + strand, within MPMX26_01294 at 1371.371 kb on + strand, within MPMX26_01294 at 1371.371 kb on + strand, within MPMX26_01294 at 1371.385 kb on + strand, within MPMX26_01294 at 1371.385 kb on + strand, within MPMX26_01294 at 1371.511 kb on + strand, within MPMX26_01294 at 1371.573 kb on + strand, within MPMX26_01294 at 1371.573 kb on + strand, within MPMX26_01294 at 1371.573 kb on + strand, within MPMX26_01294 at 1371.573 kb on + strand, within MPMX26_01294 at 1371.573 kb on + strand, within MPMX26_01294 at 1371.575 kb on + strand, within MPMX26_01294 at 1371.683 kb on + strand at 1371.695 kb on + strand at 1371.700 kb on + strand at 1371.702 kb on + strand at 1371.702 kb on + strand at 1371.702 kb on + strand at 1372.507 kb on + strand at 1372.524 kb on + strand at 1372.534 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 1,369,407 - MPMX26_01293 0.43 -0.3 1,369,416 - MPMX26_01293 0.43 -0.7 1,369,613 - MPMX26_01293 0.61 -1.4 1,369,813 - MPMX26_01293 0.79 -0.8 1,369,813 - MPMX26_01293 0.79 +1.1 1,369,932 - MPMX26_01293 0.90 +0.7 1,370,001 - -0.6 1,370,362 + -1.0 1,370,548 + MPMX26_01294 0.12 -1.0 1,370,548 + MPMX26_01294 0.12 -0.4 1,370,548 + MPMX26_01294 0.12 -0.4 1,370,707 + MPMX26_01294 0.24 -0.1 1,370,715 + MPMX26_01294 0.25 -1.1 1,370,725 + MPMX26_01294 0.25 +0.0 1,370,728 + MPMX26_01294 0.26 -2.5 1,370,764 + MPMX26_01294 0.28 -1.7 1,370,810 + MPMX26_01294 0.32 -1.1 1,370,818 + MPMX26_01294 0.32 -1.5 1,370,818 + MPMX26_01294 0.32 -1.6 1,370,829 + MPMX26_01294 0.33 -1.5 1,370,831 + MPMX26_01294 0.33 -2.7 1,370,843 + MPMX26_01294 0.34 -0.6 1,370,848 + MPMX26_01294 0.35 -1.4 1,370,866 + MPMX26_01294 0.36 -1.7 1,370,888 + MPMX26_01294 0.38 -1.1 1,370,911 + MPMX26_01294 0.39 -1.7 1,370,911 + MPMX26_01294 0.39 -3.4 1,370,955 + MPMX26_01294 0.43 -1.1 1,370,959 + MPMX26_01294 0.43 -0.8 1,370,960 + MPMX26_01294 0.43 -0.1 1,370,985 + MPMX26_01294 0.45 -0.6 1,371,039 + MPMX26_01294 0.49 -0.5 1,371,039 + MPMX26_01294 0.49 -0.6 1,371,046 + MPMX26_01294 0.49 -0.3 1,371,046 + MPMX26_01294 0.49 +0.2 1,371,046 + MPMX26_01294 0.49 +0.2 1,371,046 + MPMX26_01294 0.49 -0.7 1,371,046 + MPMX26_01294 0.49 -0.5 1,371,078 + MPMX26_01294 0.52 -0.5 1,371,084 + MPMX26_01294 0.52 -0.9 1,371,084 + MPMX26_01294 0.52 -1.1 1,371,084 + MPMX26_01294 0.52 -1.0 1,371,084 + MPMX26_01294 0.52 -1.3 1,371,084 + MPMX26_01294 0.52 -1.7 1,371,090 + MPMX26_01294 0.53 -1.1 1,371,100 + MPMX26_01294 0.53 -0.6 1,371,112 + MPMX26_01294 0.54 -0.7 1,371,112 + MPMX26_01294 0.54 +0.1 1,371,112 + MPMX26_01294 0.54 -1.0 1,371,112 + MPMX26_01294 0.54 -0.2 1,371,132 + MPMX26_01294 0.56 -0.9 1,371,132 + MPMX26_01294 0.56 -0.1 1,371,138 + MPMX26_01294 0.56 -0.3 1,371,138 + MPMX26_01294 0.56 -0.4 1,371,138 + MPMX26_01294 0.56 -0.4 1,371,184 + MPMX26_01294 0.60 -0.4 1,371,184 + MPMX26_01294 0.60 -0.3 1,371,203 + MPMX26_01294 0.61 -1.1 1,371,339 + MPMX26_01294 0.71 +0.1 1,371,349 + MPMX26_01294 0.72 -0.2 1,371,357 + MPMX26_01294 0.72 -0.2 1,371,371 + MPMX26_01294 0.74 +0.3 1,371,371 + MPMX26_01294 0.74 -0.3 1,371,371 + MPMX26_01294 0.74 -0.8 1,371,385 + MPMX26_01294 0.75 -0.2 1,371,385 + MPMX26_01294 0.75 +1.0 1,371,511 + MPMX26_01294 0.84 -0.1 1,371,573 + MPMX26_01294 0.89 -0.2 1,371,573 + MPMX26_01294 0.89 -0.1 1,371,573 + MPMX26_01294 0.89 +0.7 1,371,573 + MPMX26_01294 0.89 +0.3 1,371,573 + MPMX26_01294 0.89 -0.2 1,371,575 + MPMX26_01294 0.89 -0.7 1,371,683 + -0.2 1,371,695 + -0.3 1,371,700 + -0.8 1,371,702 + -0.1 1,371,702 + -0.1 1,371,702 + -0.2 1,372,507 + -0.1 1,372,524 + -0.2 1,372,534 + -0.1
Or see this region's nucleotide sequence