Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00720

Experiment: TSB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00718 and MPMX26_00719 are separated by 114 nucleotidesMPMX26_00719 and MPMX26_00720 are separated by 36 nucleotidesMPMX26_00720 and MPMX26_00721 are separated by 444 nucleotidesMPMX26_00721 and MPMX26_00722 are separated by 143 nucleotides MPMX26_00718: MPMX26_00718 - Thiosulfate sulfurtransferase GlpE, at 760,993 to 761,925 _00718 MPMX26_00719: MPMX26_00719 - hypothetical protein, at 762,040 to 762,525 _00719 MPMX26_00720: MPMX26_00720 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 762,562 to 763,221 _00720 MPMX26_00721: MPMX26_00721 - Aspartate 1-decarboxylase, at 763,666 to 764,046 _00721 MPMX26_00722: MPMX26_00722 - Peptidyl-tRNA hydrolase, at 764,190 to 764,771 _00722 Position (kb) 762 763 764Strain fitness (log2 ratio) -3 -2 -1 0 1at 761.563 kb on - strand, within MPMX26_00718at 761.656 kb on - strand, within MPMX26_00718at 761.680 kb on - strand, within MPMX26_00718at 761.682 kb on - strand, within MPMX26_00718at 761.706 kb on - strand, within MPMX26_00718at 761.715 kb on - strand, within MPMX26_00718at 761.718 kb on - strand, within MPMX26_00718at 761.725 kb on - strand, within MPMX26_00718at 761.751 kb on - strand, within MPMX26_00718at 761.767 kb on - strand, within MPMX26_00718at 761.790 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.817 kb on - strand, within MPMX26_00718at 761.838 kb on - strandat 761.838 kb on - strandat 761.869 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.915 kb on - strandat 762.001 kb on + strandat 762.037 kb on + strandat 762.037 kb on + strandat 762.037 kb on + strandat 762.039 kb on + strandat 762.072 kb on + strandat 762.087 kb on + strandat 762.097 kb on + strand, within MPMX26_00719at 762.106 kb on + strand, within MPMX26_00719at 762.111 kb on + strand, within MPMX26_00719at 762.111 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.249 kb on + strand, within MPMX26_00719at 762.252 kb on + strand, within MPMX26_00719at 762.381 kb on + strand, within MPMX26_00719at 762.384 kb on + strand, within MPMX26_00719at 762.399 kb on + strand, within MPMX26_00719at 762.450 kb on + strand, within MPMX26_00719at 762.470 kb on + strand, within MPMX26_00719at 762.504 kb on + strandat 762.624 kb on - strandat 762.682 kb on - strand, within MPMX26_00720at 762.687 kb on - strand, within MPMX26_00720at 762.696 kb on - strand, within MPMX26_00720at 762.723 kb on - strand, within MPMX26_00720at 762.723 kb on - strand, within MPMX26_00720at 762.748 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.798 kb on - strand, within MPMX26_00720at 762.855 kb on - strand, within MPMX26_00720at 762.871 kb on - strand, within MPMX26_00720at 762.898 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 763.012 kb on - strand, within MPMX26_00720at 763.015 kb on - strand, within MPMX26_00720at 763.041 kb on - strand, within MPMX26_00720at 763.053 kb on - strand, within MPMX26_00720at 763.117 kb on - strand, within MPMX26_00720at 763.122 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.195 kb on - strandat 763.219 kb on - strandat 763.688 kb on - strandat 763.690 kb on - strandat 763.690 kb on - strandat 763.690 kb on - strandat 763.690 kb on - strandat 763.690 kb on - strandat 763.690 kb on - strandat 763.709 kb on - strand, within MPMX26_00721at 763.727 kb on - strand, within MPMX26_00721at 763.773 kb on + strand, within MPMX26_00721at 763.781 kb on - strand, within MPMX26_00721at 763.885 kb on + strand, within MPMX26_00721at 763.956 kb on - strand, within MPMX26_00721at 764.007 kb on - strand, within MPMX26_00721at 764.007 kb on - strand, within MPMX26_00721at 764.007 kb on - strand, within MPMX26_00721at 764.007 kb on - strand, within MPMX26_00721at 764.064 kb on - strandat 764.074 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.079 kb on - strandat 764.085 kb on - strandat 764.085 kb on - strandat 764.085 kb on - strandat 764.107 kb on + strandat 764.169 kb on - strandat 764.172 kb on - strandat 764.214 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB
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761,563 - MPMX26_00718 0.61 -0.2
761,656 - MPMX26_00718 0.71 -0.8
761,680 - MPMX26_00718 0.74 +0.0
761,682 - MPMX26_00718 0.74 -0.3
761,706 - MPMX26_00718 0.76 +0.0
761,715 - MPMX26_00718 0.77 +0.1
761,718 - MPMX26_00718 0.78 -0.3
761,725 - MPMX26_00718 0.78 -0.2
761,751 - MPMX26_00718 0.81 +0.2
761,767 - MPMX26_00718 0.83 +0.3
761,790 - MPMX26_00718 0.85 -0.2
761,797 - MPMX26_00718 0.86 -0.4
761,797 - MPMX26_00718 0.86 -0.2
761,797 - MPMX26_00718 0.86 +0.0
761,797 - MPMX26_00718 0.86 -0.6
761,817 - MPMX26_00718 0.88 +0.2
761,838 - -0.2
761,838 - -0.1
761,869 - -0.3
761,905 - -0.1
761,905 - +0.9
761,905 - +1.0
761,905 - -0.4
761,915 - -0.3
762,001 + +0.9
762,037 + +0.2
762,037 + -0.2
762,037 + -1.1
762,039 + +0.6
762,072 + -0.0
762,087 + +0.2
762,097 + MPMX26_00719 0.12 +0.2
762,106 + MPMX26_00719 0.14 +0.2
762,111 + MPMX26_00719 0.15 +0.6
762,111 + MPMX26_00719 0.15 +0.1
762,169 + MPMX26_00719 0.27 -0.4
762,169 + MPMX26_00719 0.27 +0.0
762,169 + MPMX26_00719 0.27 -1.0
762,169 + MPMX26_00719 0.27 +0.6
762,169 + MPMX26_00719 0.27 -0.7
762,169 + MPMX26_00719 0.27 -0.5
762,177 + MPMX26_00719 0.28 +0.4
762,177 + MPMX26_00719 0.28 +0.3
762,177 + MPMX26_00719 0.28 -0.1
762,177 + MPMX26_00719 0.28 -0.9
762,177 + MPMX26_00719 0.28 +0.5
762,177 + MPMX26_00719 0.28 -0.2
762,177 + MPMX26_00719 0.28 -0.3
762,177 + MPMX26_00719 0.28 +0.7
762,249 + MPMX26_00719 0.43 -1.0
762,252 + MPMX26_00719 0.44 +0.5
762,381 + MPMX26_00719 0.70 +0.1
762,384 + MPMX26_00719 0.71 +0.0
762,399 + MPMX26_00719 0.74 -0.0
762,450 + MPMX26_00719 0.84 -0.3
762,470 + MPMX26_00719 0.88 +1.0
762,504 + -0.2
762,624 - -0.1
762,682 - MPMX26_00720 0.18 +0.8
762,687 - MPMX26_00720 0.19 -0.1
762,696 - MPMX26_00720 0.20 -0.3
762,723 - MPMX26_00720 0.24 +0.9
762,723 - MPMX26_00720 0.24 -0.3
762,748 - MPMX26_00720 0.28 -0.9
762,768 - MPMX26_00720 0.31 +0.1
762,768 - MPMX26_00720 0.31 +0.7
762,768 - MPMX26_00720 0.31 -0.3
762,778 - MPMX26_00720 0.33 +0.0
762,778 - MPMX26_00720 0.33 -0.1
762,778 - MPMX26_00720 0.33 -0.4
762,778 - MPMX26_00720 0.33 +0.4
762,798 - MPMX26_00720 0.36 +0.0
762,855 - MPMX26_00720 0.44 -1.7
762,871 - MPMX26_00720 0.47 +0.3
762,898 - MPMX26_00720 0.51 +0.3
762,903 - MPMX26_00720 0.52 -0.5
762,903 - MPMX26_00720 0.52 +0.3
762,903 - MPMX26_00720 0.52 -0.2
762,903 - MPMX26_00720 0.52 +0.0
762,903 - MPMX26_00720 0.52 +0.1
763,012 - MPMX26_00720 0.68 +0.5
763,015 - MPMX26_00720 0.69 -0.5
763,041 - MPMX26_00720 0.73 -0.2
763,053 - MPMX26_00720 0.74 -0.1
763,117 - MPMX26_00720 0.84 -0.7
763,122 - MPMX26_00720 0.85 -0.1
763,132 - MPMX26_00720 0.86 +0.4
763,132 - MPMX26_00720 0.86 -0.8
763,132 - MPMX26_00720 0.86 -0.6
763,132 - MPMX26_00720 0.86 -0.2
763,132 - MPMX26_00720 0.86 -0.4
763,132 - MPMX26_00720 0.86 +0.0
763,132 - MPMX26_00720 0.86 +0.1
763,132 - MPMX26_00720 0.86 +0.1
763,132 - MPMX26_00720 0.86 -0.7
763,132 - MPMX26_00720 0.86 +0.2
763,132 - MPMX26_00720 0.86 +0.7
763,132 - MPMX26_00720 0.86 +0.2
763,195 - -0.4
763,219 - +0.4
763,688 - -1.8
763,690 - -1.1
763,690 - -1.2
763,690 - -0.1
763,690 - -1.1
763,690 - -1.9
763,690 - -0.1
763,709 - MPMX26_00721 0.11 -2.7
763,727 - MPMX26_00721 0.16 -0.3
763,773 + MPMX26_00721 0.28 -0.4
763,781 - MPMX26_00721 0.30 -1.5
763,885 + MPMX26_00721 0.57 -3.3
763,956 - MPMX26_00721 0.76 -0.7
764,007 - MPMX26_00721 0.90 -1.1
764,007 - MPMX26_00721 0.90 -1.6
764,007 - MPMX26_00721 0.90 -2.3
764,007 - MPMX26_00721 0.90 -3.0
764,064 - -1.3
764,074 - -2.3
764,079 - -0.6
764,079 - -1.3
764,079 - +0.2
764,079 - -1.6
764,079 - -0.6
764,079 - +0.2
764,079 - +0.0
764,079 - -1.1
764,079 - -1.2
764,079 - -3.3
764,085 - -1.4
764,085 - -0.4
764,085 - -1.1
764,107 + -0.9
764,169 - -0.7
764,172 - -0.2
764,214 - -0.8

Or see this region's nucleotide sequence