Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00390 and MPMX26_00391 are separated by 48 nucleotides MPMX26_00391 and MPMX26_00392 overlap by 1 nucleotides MPMX26_00392 and MPMX26_00393 are separated by 71 nucleotides MPMX26_00393 and MPMX26_00394 are separated by 94 nucleotides
MPMX26_00390: MPMX26_00390 - hypothetical protein, at 418,676 to 419,347
_00390
MPMX26_00391: MPMX26_00391 - hypothetical protein, at 419,396 to 419,767
_00391
MPMX26_00392: MPMX26_00392 - hypothetical protein, at 419,767 to 420,153
_00392
MPMX26_00393: MPMX26_00393 - Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase, at 420,225 to 421,034
_00393
MPMX26_00394: MPMX26_00394 - hypothetical protein, at 421,129 to 421,914
_00394
Position (kb) 419
420
421 Strain fitness (log2 ratio) -1
0
1
2 at 418.793 kb on + strand, within MPMX26_00390 at 418.798 kb on + strand, within MPMX26_00390 at 418.832 kb on - strand, within MPMX26_00390 at 418.841 kb on + strand, within MPMX26_00390 at 418.841 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 419.003 kb on + strand, within MPMX26_00390 at 419.635 kb on - strand, within MPMX26_00391 at 419.814 kb on - strand, within MPMX26_00392 at 419.814 kb on - strand, within MPMX26_00392 at 419.814 kb on - strand, within MPMX26_00392 at 419.821 kb on - strand, within MPMX26_00392 at 419.950 kb on - strand, within MPMX26_00392 at 419.950 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.985 kb on - strand, within MPMX26_00392 at 420.070 kb on - strand, within MPMX26_00392 at 420.082 kb on - strand, within MPMX26_00392 at 421.149 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 418,793 + MPMX26_00390 0.17 +0.5 418,798 + MPMX26_00390 0.18 -0.8 418,832 - MPMX26_00390 0.23 +1.3 418,841 + MPMX26_00390 0.25 +0.4 418,841 + MPMX26_00390 0.25 +0.9 418,872 + MPMX26_00390 0.29 -0.6 418,872 + MPMX26_00390 0.29 +1.4 418,872 + MPMX26_00390 0.29 +1.8 419,003 + MPMX26_00390 0.49 +0.7 419,635 - MPMX26_00391 0.64 -0.1 419,814 - MPMX26_00392 0.12 +0.3 419,814 - MPMX26_00392 0.12 +0.4 419,814 - MPMX26_00392 0.12 -1.0 419,821 - MPMX26_00392 0.14 -0.4 419,950 - MPMX26_00392 0.47 +0.1 419,950 - MPMX26_00392 0.47 +0.7 419,955 - MPMX26_00392 0.49 +0.1 419,955 - MPMX26_00392 0.49 -0.1 419,955 - MPMX26_00392 0.49 -1.1 419,985 - MPMX26_00392 0.56 -0.3 420,070 - MPMX26_00392 0.78 +0.1 420,082 - MPMX26_00392 0.81 -1.1 421,149 - +0.5
Or see this region's nucleotide sequence