Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00335 and MPMX26_00336 overlap by 11 nucleotides MPMX26_00336 and MPMX26_00337 are separated by 179 nucleotides MPMX26_00337 and MPMX26_00338 are separated by 309 nucleotides
MPMX26_00335: MPMX26_00335 - hypothetical protein, at 364,007 to 365,047
_00335
MPMX26_00336: MPMX26_00336 - hypothetical protein, at 365,037 to 365,426
_00336
MPMX26_00337: MPMX26_00337 - Catalase, at 365,606 to 367,126
_00337
MPMX26_00338: MPMX26_00338 - hypothetical protein, at 367,436 to 368,056
_00338
Position (kb) 365
366
367
368 Strain fitness (log2 ratio) -1
0
1
2 at 364.615 kb on + strand, within MPMX26_00335 at 364.625 kb on + strand, within MPMX26_00335 at 364.637 kb on + strand, within MPMX26_00335 at 364.637 kb on + strand, within MPMX26_00335 at 364.642 kb on + strand, within MPMX26_00335 at 364.657 kb on + strand, within MPMX26_00335 at 364.741 kb on + strand, within MPMX26_00335 at 364.787 kb on + strand, within MPMX26_00335 at 364.937 kb on + strand, within MPMX26_00335 at 364.937 kb on + strand, within MPMX26_00335 at 364.969 kb on + strand at 365.632 kb on - strand at 365.638 kb on - strand at 365.654 kb on - strand at 365.660 kb on - strand at 365.708 kb on - strand at 365.708 kb on - strand at 365.724 kb on - strand at 365.726 kb on - strand at 365.819 kb on - strand, within MPMX26_00337 at 365.819 kb on - strand, within MPMX26_00337 at 365.819 kb on - strand, within MPMX26_00337 at 365.819 kb on - strand, within MPMX26_00337 at 365.819 kb on - strand, within MPMX26_00337 at 365.819 kb on - strand, within MPMX26_00337 at 365.860 kb on - strand, within MPMX26_00337 at 366.004 kb on - strand, within MPMX26_00337 at 366.328 kb on - strand, within MPMX26_00337 at 366.366 kb on + strand, within MPMX26_00337 at 366.415 kb on - strand, within MPMX26_00337 at 366.464 kb on - strand, within MPMX26_00337 at 366.506 kb on + strand, within MPMX26_00337 at 366.589 kb on - strand, within MPMX26_00337 at 366.631 kb on - strand, within MPMX26_00337 at 366.725 kb on - strand, within MPMX26_00337 at 366.817 kb on - strand, within MPMX26_00337 at 366.835 kb on - strand, within MPMX26_00337 at 366.890 kb on - strand, within MPMX26_00337 at 366.890 kb on - strand, within MPMX26_00337 at 366.890 kb on - strand, within MPMX26_00337 at 366.900 kb on - strand, within MPMX26_00337 at 367.294 kb on - strand at 367.294 kb on - strand at 367.606 kb on - strand, within MPMX26_00338
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 364,615 + MPMX26_00335 0.58 -0.9 364,625 + MPMX26_00335 0.59 -1.3 364,637 + MPMX26_00335 0.61 -0.5 364,637 + MPMX26_00335 0.61 +1.1 364,642 + MPMX26_00335 0.61 +0.1 364,657 + MPMX26_00335 0.62 +0.1 364,741 + MPMX26_00335 0.71 +1.0 364,787 + MPMX26_00335 0.75 -1.3 364,937 + MPMX26_00335 0.89 +0.0 364,937 + MPMX26_00335 0.89 -0.2 364,969 + -0.1 365,632 - +1.2 365,638 - +0.8 365,654 - -0.2 365,660 - +1.4 365,708 - -1.3 365,708 - -0.8 365,724 - -0.1 365,726 - -1.2 365,819 - MPMX26_00337 0.14 +1.7 365,819 - MPMX26_00337 0.14 +1.4 365,819 - MPMX26_00337 0.14 -0.7 365,819 - MPMX26_00337 0.14 +1.4 365,819 - MPMX26_00337 0.14 +0.0 365,819 - MPMX26_00337 0.14 -1.0 365,860 - MPMX26_00337 0.17 +0.9 366,004 - MPMX26_00337 0.26 +0.0 366,328 - MPMX26_00337 0.47 +1.8 366,366 + MPMX26_00337 0.50 -0.4 366,415 - MPMX26_00337 0.53 +0.8 366,464 - MPMX26_00337 0.56 -1.4 366,506 + MPMX26_00337 0.59 +1.6 366,589 - MPMX26_00337 0.65 +0.4 366,631 - MPMX26_00337 0.67 +0.6 366,725 - MPMX26_00337 0.74 +0.7 366,817 - MPMX26_00337 0.80 +0.3 366,835 - MPMX26_00337 0.81 +2.3 366,890 - MPMX26_00337 0.84 +1.4 366,890 - MPMX26_00337 0.84 +0.9 366,890 - MPMX26_00337 0.84 +0.7 366,900 - MPMX26_00337 0.85 -0.8 367,294 - +1.0 367,294 - -0.5 367,606 - MPMX26_00338 0.27 -0.4
Or see this region's nucleotide sequence