Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4750

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
1,737,652	+				+0.6
1,737,652	+				+0.7
1,737,700	+				+0.6
1,737,701	-				-0.7
1,737,701	-				-0.0
1,738,385	+				-0.1
1,739,432	+		GFF4750	0.15	-0.0
1,739,432	+		GFF4750	0.15	+0.3
1,739,432	+		GFF4750	0.15	-0.3
1,739,432	+		GFF4750	0.15	-0.1
1,739,432	+		GFF4750	0.15	+0.7
1,739,432	+		GFF4750	0.15	-0.1
1,739,433	-		GFF4750	0.16	+0.2
1,740,276	-		GFF4750	0.26	+0.5
1,740,276	-		GFF4750	0.26	-0.2
1,741,217	+		GFF4750	0.39	-1.5
1,741,217	+		GFF4750	0.39	+0.6
1,741,217	+		GFF4750	0.39	+0.2
1,741,334	-		GFF4750	0.40	-0.0
1,741,547	+		GFF4750	0.43	-0.4
1,741,548	-		GFF4750	0.43	-0.1
1,741,548	-		GFF4750	0.43	+0.3
1,741,548	-		GFF4750	0.43	+0.0
1,741,725	-		GFF4750	0.45	+0.1
1,741,725	-		GFF4750	0.45	+0.5
1,741,725	-		GFF4750	0.45	+0.5
1,742,093	+		GFF4750	0.50	+0.5
1,742,093	+		GFF4750	0.50	+1.9
1,742,094	-		GFF4750	0.50	+0.2
1,742,135	+		GFF4750	0.51	+1.0
1,742,136	-		GFF4750	0.51	+0.1
1,742,265	-		GFF4750	0.52	-0.3
1,742,489	+		GFF4750	0.55	-0.4
1,742,489	+		GFF4750	0.55	+0.5
1,742,490	-		GFF4750	0.55	+0.4
1,742,571	-		GFF4750	0.56	-0.1
1,742,702	+		GFF4750	0.58	-0.4
1,742,703	-		GFF4750	0.58	+0.1
1,743,071	+		GFF4750	0.63	+1.1
1,743,071	+		GFF4750	0.63	+1.8
1,743,072	-		GFF4750	0.63	-0.3
1,743,072	-		GFF4750	0.63	+0.2
1,743,300	-		GFF4750	0.66	+0.3
1,743,515	+		GFF4750	0.68	-0.3
1,744,181	+		GFF4750	0.77	+0.2
1,744,181	+		GFF4750	0.77	+0.1
1,744,182	-		GFF4750	0.77	-1.3
1,744,206	-		GFF4750	0.77	+0.6
1,744,206	-		GFF4750	0.77	+0.3
1,744,446	-		GFF4750	0.81	+0.1
1,745,348	+				-0.0
1,745,349	-				-0.2
1,745,349	-				+0.1
1,745,438	+				-0.2
1,745,438	+				-0.4
1,745,438	+				+0.2
1,745,439	-				-0.6
1,745,439	-				+0.2
1,745,439	-				-0.1
1,745,468	+				-0.3
1,746,913	+		GFF4751	0.22	+0.2
1,746,914	-		GFF4751	0.22	+0.7