Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4749

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
1,730,897	+		GFF4748	0.20	-0.1
1,730,898	-		GFF4748	0.20	-0.1
1,730,898	-		GFF4748	0.20	+1.9
1,731,075	-		GFF4748	0.40	-0.4
1,731,128	+		GFF4748	0.46	-0.4
1,731,128	+		GFF4748	0.46	-0.6
1,731,128	+		GFF4748	0.46	+0.2
1,731,128	+		GFF4748	0.46	+0.1
1,731,128	+		GFF4748	0.46	-0.2
1,731,129	-		GFF4748	0.46	-0.2
1,731,129	-		GFF4748	0.46	-0.2
1,731,805	+				+0.2
1,732,252	+				+0.6
1,732,253	-				-0.5
1,732,807	+		GFF4749	0.18	-0.4
1,732,808	-		GFF4749	0.18	+0.1
1,732,808	-		GFF4749	0.18	+0.3
1,733,230	+		GFF4749	0.24	-0.0
1,733,230	+		GFF4749	0.24	-0.1
1,733,510	-		GFF4749	0.29	+0.4
1,733,875	+		GFF4749	0.34	+1.7
1,733,875	+		GFF4749	0.34	-0.8
1,733,875	+		GFF4749	0.34	+1.5
1,733,875	+		GFF4749	0.34	+0.6
1,733,875	+		GFF4749	0.34	+0.3
1,733,875	+		GFF4749	0.34	-0.1
1,733,876	-		GFF4749	0.34	+0.7
1,733,876	-		GFF4749	0.34	-0.0
1,733,876	-		GFF4749	0.34	+0.6
1,733,983	+		GFF4749	0.36	-0.1
1,734,010	+		GFF4749	0.36	+0.3
1,734,010	+		GFF4749	0.36	+0.5
1,734,011	-		GFF4749	0.36	-0.3
1,734,421	+		GFF4749	0.42	+0.2
1,734,422	-		GFF4749	0.42	+1.9
1,734,422	-		GFF4749	0.42	+0.4
1,734,793	+		GFF4749	0.48	-0.1
1,734,793	+		GFF4749	0.48	-0.1
1,734,793	+		GFF4749	0.48	-0.3
1,734,794	-		GFF4749	0.48	+0.0
1,734,794	-		GFF4749	0.48	-0.3
1,734,794	-		GFF4749	0.48	+0.0
1,734,794	-		GFF4749	0.48	-0.2
1,734,794	-		GFF4749	0.48	+0.3
1,734,794	-		GFF4749	0.48	-1.6
1,735,163	-		GFF4749	0.54	-0.2
1,735,375	+		GFF4749	0.57	+1.5
1,735,375	+		GFF4749	0.57	+0.1
1,735,375	+		GFF4749	0.57	+0.1
1,735,375	+		GFF4749	0.57	-0.1
1,735,376	-		GFF4749	0.57	-0.3
1,735,376	-		GFF4749	0.57	-0.2
1,735,376	-		GFF4749	0.57	+0.3
1,735,376	-		GFF4749	0.57	+0.1
1,735,376	-		GFF4749	0.57	-0.4
1,735,376	-		GFF4749	0.57	+1.0
1,735,519	+		GFF4749	0.59	-0.4
1,735,519	+		GFF4749	0.59	+0.7
1,735,594	+		GFF4749	0.60	-0.7
1,735,595	-		GFF4749	0.60	+0.4
1,735,595	-		GFF4749	0.60	+0.0
1,735,595	-		GFF4749	0.60	+0.9
1,735,742	-		GFF4749	0.62	+0.6
1,735,742	-		GFF4749	0.62	+0.1
1,736,248	+		GFF4749	0.70	+1.1
1,736,248	+		GFF4749	0.70	-0.5
1,736,248	+		GFF4749	0.70	-0.1
1,736,249	-		GFF4749	0.70	-0.5
1,736,320	+		GFF4749	0.71	-0.3
1,736,468	-		GFF4749	0.73	+0.7
1,736,531	-		GFF4749	0.74	+1.8
1,736,531	-		GFF4749	0.74	+0.5
1,736,886	+		GFF4749	0.80	+0.4
1,736,962	+		GFF4749	0.81	-0.5
1,737,652	+				+0.6
1,737,652	+				+0.7
1,737,700	+				+0.6
1,737,701	-				-0.7
1,737,701	-				-0.0
1,738,385	+				-0.1