Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4223

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
1,135,161	+		GFF4221	0.81	-0.3
1,135,162	-		GFF4221	0.81	-1.9
1,135,162	-		GFF4221	0.81	+2.1
1,135,162	-		GFF4221	0.81	+0.9
1,135,480	+		GFF4222	0.17	+0.1
1,135,481	-		GFF4222	0.17	+0.2
1,135,481	-		GFF4222	0.17	+0.3
1,135,846	+		GFF4222	0.88	+0.8
1,135,847	-		GFF4222	0.89	-0.7
1,135,975	+				-0.4
1,135,975	+				-0.8
1,135,975	+				+1.1
1,135,976	-				+0.2
1,136,430	+		GFF4223	0.36	-1.5
1,136,430	+		GFF4223	0.36	+0.2
1,136,475	+		GFF4223	0.41	-0.2
1,136,475	+		GFF4223	0.41	-0.5
1,136,475	+		GFF4223	0.41	+0.5
1,136,475	+		GFF4223	0.41	+1.3
1,136,475	+		GFF4223	0.41	+0.0
1,136,475	+		GFF4223	0.41	+2.1
1,136,476	-		GFF4223	0.41	+0.2
1,136,476	-		GFF4223	0.41	+0.2
1,136,841	+		GFF4223	0.84	+1.1
1,136,841	+		GFF4223	0.84	-0.1
1,136,842	-		GFF4223	0.84	+0.7
1,137,197	+		GFF4224	0.25	+0.2
1,137,485	+		GFF4224	0.56	-0.1
1,137,486	-		GFF4224	0.56	-0.2
1,137,486	-		GFF4224	0.56	-0.5
1,137,503	+		GFF4224	0.58	+0.0
1,137,503	+		GFF4224	0.58	-0.2
1,137,584	+		GFF4224	0.67	+0.3
1,137,585	-		GFF4224	0.67	+0.2
1,137,617	+		GFF4224	0.70	-0.0
1,137,617	+		GFF4224	0.70	-0.3
1,137,617	+		GFF4224	0.70	+0.4
1,137,617	+		GFF4224	0.70	-1.1
1,137,618	-		GFF4224	0.70	+1.3
1,137,618	-		GFF4224	0.70	-0.3
1,137,618	-		GFF4224	0.70	+0.1
1,137,618	-		GFF4224	0.70	-0.5
1,137,618	-		GFF4224	0.70	-0.5
1,137,731	+		GFF4224	0.83	-0.6
1,137,732	-		GFF4224	0.83	+0.4
1,137,892	+				-0.4