Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3461

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
340,667	-		GFF3460	0.46	-1.0
341,227	-		GFF3460	0.79	-0.7
341,539	+				-0.8
341,540	-				-0.8
341,540	-				+0.7
341,563	+				-0.3
341,564	-				-0.8
341,649	-				+0.4
341,808	+		GFF3461	0.25	+0.0
342,086	+		GFF3461	0.61	-0.9
342,481	-				+0.6
342,864	+		GFF3462	0.27	+0.2
342,865	-		GFF3462	0.27	+0.1
342,865	-		GFF3462	0.27	-0.8
342,865	-		GFF3462	0.27	-0.6
343,216	-		GFF3462	0.47	-0.3