Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3269

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
149,847	+		GFF3268	0.69	+0.1
149,977	+				-0.4
149,977	+				-0.3
149,977	+				-0.7
149,978	-				+0.1
150,186	-				-0.7
150,309	-				-0.1
150,473	+		GFF3269	0.12	-0.8
150,525	-		GFF3269	0.14	-0.1
150,525	-		GFF3269	0.14	-0.1
151,017	-		GFF3269	0.28	-1.1
151,380	-		GFF3269	0.38	+0.5
151,547	+		GFF3269	0.43	-0.4
151,551	-		GFF3269	0.43	-0.2
151,775	+		GFF3269	0.50	-0.7
151,776	-		GFF3269	0.50	-0.9
151,952	+		GFF3269	0.55	-0.3
152,205	-		GFF3269	0.62	-0.5
152,205	-		GFF3269	0.62	-0.2
152,442	-		GFF3269	0.69	-0.4
153,371	+				-0.7
153,633	+		GFF3270	0.13	-0.1
154,338	+		GFF3270	0.82	-0.4
154,339	-		GFF3270	0.82	-0.7