Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03632

Experiment: Dextran, Mw ~200,000 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03631 and BACOVA_03632 are separated by 18 nucleotidesBACOVA_03632 and BACOVA_03633 are separated by 14 nucleotides BACOVA_03631: BACOVA_03631 - hypothetical protein, at 443,907 to 445,088 _03631 BACOVA_03632: BACOVA_03632 - hypothetical protein, at 445,107 to 446,354 _03632 BACOVA_03633: BACOVA_03633 - glycosyl hydrolase family 76, at 446,369 to 447,760 _03633 Position (kb) 445 446 447Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 444.143 kb on + strand, within BACOVA_03631at 444.146 kb on + strand, within BACOVA_03631at 444.146 kb on + strand, within BACOVA_03631at 444.147 kb on - strand, within BACOVA_03631at 444.147 kb on - strand, within BACOVA_03631at 444.158 kb on + strand, within BACOVA_03631at 444.159 kb on - strand, within BACOVA_03631at 444.159 kb on - strand, within BACOVA_03631at 444.211 kb on + strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.212 kb on - strand, within BACOVA_03631at 444.214 kb on + strand, within BACOVA_03631at 444.215 kb on - strand, within BACOVA_03631at 444.220 kb on + strand, within BACOVA_03631at 444.389 kb on + strand, within BACOVA_03631at 444.426 kb on - strand, within BACOVA_03631at 444.471 kb on - strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.485 kb on + strand, within BACOVA_03631at 444.486 kb on - strand, within BACOVA_03631at 444.495 kb on - strand, within BACOVA_03631at 444.528 kb on - strand, within BACOVA_03631at 444.581 kb on + strand, within BACOVA_03631at 444.582 kb on - strand, within BACOVA_03631at 444.584 kb on - strand, within BACOVA_03631at 444.593 kb on - strand, within BACOVA_03631at 444.594 kb on + strand, within BACOVA_03631at 444.595 kb on - strand, within BACOVA_03631at 444.629 kb on + strand, within BACOVA_03631at 444.629 kb on + strand, within BACOVA_03631at 444.630 kb on - strand, within BACOVA_03631at 444.636 kb on + strand, within BACOVA_03631at 444.636 kb on + strand, within BACOVA_03631at 444.638 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.640 kb on + strand, within BACOVA_03631at 444.725 kb on - strand, within BACOVA_03631at 444.783 kb on + strand, within BACOVA_03631at 444.839 kb on + strand, within BACOVA_03631at 444.848 kb on + strand, within BACOVA_03631at 444.849 kb on - strand, within BACOVA_03631at 444.849 kb on - strand, within BACOVA_03631at 445.001 kb on + strandat 445.047 kb on - strandat 445.087 kb on - strandat 445.100 kb on + strandat 445.104 kb on - strandat 445.349 kb on + strand, within BACOVA_03632at 445.354 kb on + strand, within BACOVA_03632at 445.369 kb on + strand, within BACOVA_03632at 445.397 kb on + strand, within BACOVA_03632at 445.481 kb on - strand, within BACOVA_03632at 445.484 kb on + strand, within BACOVA_03632at 445.543 kb on - strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.565 kb on + strand, within BACOVA_03632at 445.566 kb on - strand, within BACOVA_03632at 445.596 kb on - strand, within BACOVA_03632at 445.759 kb on + strand, within BACOVA_03632at 445.760 kb on - strand, within BACOVA_03632at 445.763 kb on + strand, within BACOVA_03632at 445.763 kb on + strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.764 kb on - strand, within BACOVA_03632at 445.769 kb on + strand, within BACOVA_03632at 445.774 kb on + strand, within BACOVA_03632at 445.775 kb on - strand, within BACOVA_03632at 445.775 kb on - strand, within BACOVA_03632at 445.797 kb on + strand, within BACOVA_03632at 445.798 kb on - strand, within BACOVA_03632at 445.798 kb on - strand, within BACOVA_03632at 445.829 kb on + strand, within BACOVA_03632at 445.847 kb on + strand, within BACOVA_03632at 445.847 kb on + strand, within BACOVA_03632at 445.848 kb on - strand, within BACOVA_03632at 445.848 kb on - strand, within BACOVA_03632at 445.934 kb on - strand, within BACOVA_03632at 445.942 kb on - strand, within BACOVA_03632at 446.010 kb on + strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.011 kb on - strand, within BACOVA_03632at 446.069 kb on + strand, within BACOVA_03632at 446.109 kb on - strand, within BACOVA_03632at 446.109 kb on - strand, within BACOVA_03632at 446.154 kb on + strand, within BACOVA_03632at 446.154 kb on + strand, within BACOVA_03632at 446.155 kb on - strand, within BACOVA_03632at 446.158 kb on - strand, within BACOVA_03632at 446.158 kb on - strand, within BACOVA_03632at 446.165 kb on - strand, within BACOVA_03632at 446.199 kb on + strand, within BACOVA_03632at 446.200 kb on - strand, within BACOVA_03632at 446.200 kb on - strand, within BACOVA_03632at 446.256 kb on + strandat 446.259 kb on + strandat 446.260 kb on - strandat 446.314 kb on - strandat 446.314 kb on - strandat 446.363 kb on - strandat 446.365 kb on + strandat 446.366 kb on - strandat 446.379 kb on - strandat 446.379 kb on - strandat 446.379 kb on - strandat 446.380 kb on + strandat 446.382 kb on + strandat 446.382 kb on + strandat 446.386 kb on - strandat 446.386 kb on - strandat 446.386 kb on - strandat 446.386 kb on - strandat 446.468 kb on + strandat 446.468 kb on + strandat 446.477 kb on - strandat 446.492 kb on + strandat 446.492 kb on + strandat 446.493 kb on - strandat 446.544 kb on - strand, within BACOVA_03633at 446.702 kb on + strand, within BACOVA_03633at 446.705 kb on - strand, within BACOVA_03633at 446.705 kb on - strand, within BACOVA_03633at 446.827 kb on + strand, within BACOVA_03633at 446.835 kb on - strand, within BACOVA_03633at 446.835 kb on - strand, within BACOVA_03633at 446.835 kb on - strand, within BACOVA_03633at 446.876 kb on + strand, within BACOVA_03633at 446.900 kb on + strand, within BACOVA_03633at 446.903 kb on + strand, within BACOVA_03633at 446.904 kb on - strand, within BACOVA_03633at 446.956 kb on + strand, within BACOVA_03633at 447.004 kb on + strand, within BACOVA_03633at 447.005 kb on - strand, within BACOVA_03633at 447.051 kb on - strand, within BACOVA_03633at 447.058 kb on + strand, within BACOVA_03633at 447.128 kb on + strand, within BACOVA_03633at 447.128 kb on + strand, within BACOVA_03633at 447.129 kb on - strand, within BACOVA_03633at 447.147 kb on - strand, within BACOVA_03633at 447.158 kb on - strand, within BACOVA_03633at 447.176 kb on + strand, within BACOVA_03633at 447.176 kb on + strand, within BACOVA_03633at 447.177 kb on - strand, within BACOVA_03633at 447.181 kb on + strand, within BACOVA_03633at 447.181 kb on + strand, within BACOVA_03633at 447.228 kb on + strand, within BACOVA_03633at 447.228 kb on + strand, within BACOVA_03633at 447.256 kb on + strand, within BACOVA_03633at 447.257 kb on - strand, within BACOVA_03633at 447.278 kb on + strand, within BACOVA_03633at 447.279 kb on - strand, within BACOVA_03633at 447.279 kb on - strand, within BACOVA_03633at 447.279 kb on - strand, within BACOVA_03633at 447.279 kb on - strand, within BACOVA_03633at 447.286 kb on + strand, within BACOVA_03633at 447.302 kb on + strand, within BACOVA_03633at 447.303 kb on - strand, within BACOVA_03633at 447.311 kb on - strand, within BACOVA_03633

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Per-strain Table

Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/mL (C)
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444,143 + BACOVA_03631 0.20 -0.6
444,146 + BACOVA_03631 0.20 +0.8
444,146 + BACOVA_03631 0.20 -1.0
444,147 - BACOVA_03631 0.20 -0.2
444,147 - BACOVA_03631 0.20 -1.2
444,158 + BACOVA_03631 0.21 -0.1
444,159 - BACOVA_03631 0.21 +0.6
444,159 - BACOVA_03631 0.21 -2.5
444,211 + BACOVA_03631 0.26 -1.4
444,212 - BACOVA_03631 0.26 -1.5
444,212 - BACOVA_03631 0.26 -0.3
444,212 - BACOVA_03631 0.26 -2.3
444,214 + BACOVA_03631 0.26 +0.4
444,215 - BACOVA_03631 0.26 +0.1
444,220 + BACOVA_03631 0.26 -1.0
444,389 + BACOVA_03631 0.41 -0.8
444,426 - BACOVA_03631 0.44 -1.2
444,471 - BACOVA_03631 0.48 -1.6
444,485 + BACOVA_03631 0.49 -0.4
444,485 + BACOVA_03631 0.49 +3.1
444,485 + BACOVA_03631 0.49 +1.6
444,486 - BACOVA_03631 0.49 -1.9
444,495 - BACOVA_03631 0.50 -1.3
444,528 - BACOVA_03631 0.53 -1.4
444,581 + BACOVA_03631 0.57 +0.1
444,582 - BACOVA_03631 0.57 -0.4
444,584 - BACOVA_03631 0.57 -0.5
444,593 - BACOVA_03631 0.58 -0.1
444,594 + BACOVA_03631 0.58 -0.9
444,595 - BACOVA_03631 0.58 -2.8
444,629 + BACOVA_03631 0.61 -3.8
444,629 + BACOVA_03631 0.61 +1.3
444,630 - BACOVA_03631 0.61 -0.2
444,636 + BACOVA_03631 0.62 -1.0
444,636 + BACOVA_03631 0.62 +1.8
444,638 + BACOVA_03631 0.62 -0.0
444,640 + BACOVA_03631 0.62 +1.2
444,640 + BACOVA_03631 0.62 -0.5
444,640 + BACOVA_03631 0.62 +0.8
444,725 - BACOVA_03631 0.69 -1.6
444,783 + BACOVA_03631 0.74 -1.3
444,839 + BACOVA_03631 0.79 +3.1
444,848 + BACOVA_03631 0.80 +3.1
444,849 - BACOVA_03631 0.80 -0.9
444,849 - BACOVA_03631 0.80 -1.1
445,001 + +1.5
445,047 - +0.5
445,087 - -1.4
445,100 + +0.7
445,104 - -1.1
445,349 + BACOVA_03632 0.19 -0.9
445,354 + BACOVA_03632 0.20 -0.3
445,369 + BACOVA_03632 0.21 -1.5
445,397 + BACOVA_03632 0.23 -2.2
445,481 - BACOVA_03632 0.30 +0.5
445,484 + BACOVA_03632 0.30 +0.7
445,543 - BACOVA_03632 0.35 -1.6
445,565 + BACOVA_03632 0.37 -0.4
445,565 + BACOVA_03632 0.37 -0.0
445,565 + BACOVA_03632 0.37 -2.5
445,566 - BACOVA_03632 0.37 +0.2
445,596 - BACOVA_03632 0.39 -1.2
445,759 + BACOVA_03632 0.52 +1.4
445,760 - BACOVA_03632 0.52 -2.7
445,763 + BACOVA_03632 0.53 +2.7
445,763 + BACOVA_03632 0.53 -0.5
445,764 - BACOVA_03632 0.53 -1.6
445,764 - BACOVA_03632 0.53 -0.8
445,764 - BACOVA_03632 0.53 -0.9
445,769 + BACOVA_03632 0.53 -0.8
445,774 + BACOVA_03632 0.53 -0.3
445,775 - BACOVA_03632 0.54 -0.4
445,775 - BACOVA_03632 0.54 -0.6
445,797 + BACOVA_03632 0.55 -0.6
445,798 - BACOVA_03632 0.55 -1.6
445,798 - BACOVA_03632 0.55 -0.7
445,829 + BACOVA_03632 0.58 -3.6
445,847 + BACOVA_03632 0.59 -0.5
445,847 + BACOVA_03632 0.59 -0.4
445,848 - BACOVA_03632 0.59 -2.0
445,848 - BACOVA_03632 0.59 -0.6
445,934 - BACOVA_03632 0.66 +0.6
445,942 - BACOVA_03632 0.67 -1.8
446,010 + BACOVA_03632 0.72 +1.1
446,011 - BACOVA_03632 0.72 -0.6
446,011 - BACOVA_03632 0.72 +0.5
446,011 - BACOVA_03632 0.72 +0.2
446,069 + BACOVA_03632 0.77 -1.7
446,109 - BACOVA_03632 0.80 -1.3
446,109 - BACOVA_03632 0.80 -1.4
446,154 + BACOVA_03632 0.84 +1.6
446,154 + BACOVA_03632 0.84 +1.2
446,155 - BACOVA_03632 0.84 -1.0
446,158 - BACOVA_03632 0.84 -0.3
446,158 - BACOVA_03632 0.84 -0.5
446,165 - BACOVA_03632 0.85 -0.3
446,199 + BACOVA_03632 0.88 -1.3
446,200 - BACOVA_03632 0.88 -1.6
446,200 - BACOVA_03632 0.88 -0.9
446,256 + +1.4
446,259 + +2.2
446,260 - -2.3
446,314 - -0.3
446,314 - -1.1
446,363 - +0.2
446,365 + +2.1
446,366 - -0.2
446,379 - -0.9
446,379 - -1.4
446,379 - -0.3
446,380 + +1.2
446,382 + +0.1
446,382 + -1.2
446,386 - -0.8
446,386 - -1.5
446,386 - -2.3
446,386 - -2.0
446,468 + +1.5
446,468 + -1.4
446,477 - -0.4
446,492 + -1.2
446,492 + -0.5
446,493 - -0.4
446,544 - BACOVA_03633 0.13 -1.9
446,702 + BACOVA_03633 0.24 -0.6
446,705 - BACOVA_03633 0.24 -0.1
446,705 - BACOVA_03633 0.24 -1.7
446,827 + BACOVA_03633 0.33 -0.3
446,835 - BACOVA_03633 0.33 -0.8
446,835 - BACOVA_03633 0.33 +0.0
446,835 - BACOVA_03633 0.33 -1.3
446,876 + BACOVA_03633 0.36 +1.4
446,900 + BACOVA_03633 0.38 -0.9
446,903 + BACOVA_03633 0.38 -3.1
446,904 - BACOVA_03633 0.38 -1.1
446,956 + BACOVA_03633 0.42 -0.3
447,004 + BACOVA_03633 0.46 -1.6
447,005 - BACOVA_03633 0.46 -3.3
447,051 - BACOVA_03633 0.49 -1.9
447,058 + BACOVA_03633 0.49 -2.3
447,128 + BACOVA_03633 0.55 -2.5
447,128 + BACOVA_03633 0.55 -2.7
447,129 - BACOVA_03633 0.55 -1.5
447,147 - BACOVA_03633 0.56 -2.0
447,158 - BACOVA_03633 0.57 -0.5
447,176 + BACOVA_03633 0.58 -0.3
447,176 + BACOVA_03633 0.58 +0.1
447,177 - BACOVA_03633 0.58 -0.1
447,181 + BACOVA_03633 0.58 -1.5
447,181 + BACOVA_03633 0.58 -1.3
447,228 + BACOVA_03633 0.62 -0.3
447,228 + BACOVA_03633 0.62 -0.9
447,256 + BACOVA_03633 0.64 -2.0
447,257 - BACOVA_03633 0.64 -0.4
447,278 + BACOVA_03633 0.65 -0.8
447,279 - BACOVA_03633 0.65 -2.9
447,279 - BACOVA_03633 0.65 -0.1
447,279 - BACOVA_03633 0.65 -0.7
447,279 - BACOVA_03633 0.65 -4.6
447,286 + BACOVA_03633 0.66 +1.1
447,302 + BACOVA_03633 0.67 -0.3
447,303 - BACOVA_03633 0.67 -0.3
447,311 - BACOVA_03633 0.68 -0.7

Or see this region's nucleotide sequence