Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02597

Experiment: Dextran, Mw ~200,000 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02595 and BACOVA_02596 are separated by 36 nucleotidesBACOVA_02596 and BACOVA_02597 overlap by 23 nucleotidesBACOVA_02597 and BACOVA_02598 are separated by 47 nucleotidesBACOVA_02598 and BACOVA_02599 overlap by 4 nucleotides BACOVA_02595: BACOVA_02595 - hypothetical protein, at 365,476 to 367,032 _02595 BACOVA_02596: BACOVA_02596 - ABC transporter, ATP-binding protein, at 367,069 to 367,584 _02596 BACOVA_02597: BACOVA_02597 - hypothetical protein, at 367,562 to 367,690 _02597 BACOVA_02598: BACOVA_02598 - conserved hypothetical protein TIGR00245, at 367,738 to 368,532 _02598 BACOVA_02599: BACOVA_02599 - hypothetical protein, at 368,529 to 368,825 _02599 Position (kb) 367 368Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 366.586 kb on + strand, within BACOVA_02595at 366.586 kb on + strand, within BACOVA_02595at 366.609 kb on + strand, within BACOVA_02595at 366.611 kb on + strand, within BACOVA_02595at 366.673 kb on + strand, within BACOVA_02595at 366.674 kb on - strand, within BACOVA_02595at 367.031 kb on - strandat 367.031 kb on - strandat 367.031 kb on - strandat 367.066 kb on + strandat 367.073 kb on + strandat 367.073 kb on + strandat 367.073 kb on + strandat 367.074 kb on - strandat 367.074 kb on - strandat 367.077 kb on + strandat 367.080 kb on + strandat 367.092 kb on + strandat 367.131 kb on + strand, within BACOVA_02596at 367.208 kb on + strand, within BACOVA_02596at 367.239 kb on + strand, within BACOVA_02596at 367.239 kb on + strand, within BACOVA_02596at 367.240 kb on - strand, within BACOVA_02596at 367.266 kb on + strand, within BACOVA_02596at 367.266 kb on + strand, within BACOVA_02596at 367.282 kb on - strand, within BACOVA_02596at 367.326 kb on + strand, within BACOVA_02596at 367.494 kb on + strand, within BACOVA_02596at 367.495 kb on - strand, within BACOVA_02596at 367.495 kb on - strand, within BACOVA_02596at 367.497 kb on + strand, within BACOVA_02596at 367.537 kb on - strandat 367.633 kb on - strand, within BACOVA_02597at 367.639 kb on - strand, within BACOVA_02597at 367.680 kb on + strandat 367.692 kb on + strandat 367.718 kb on - strandat 367.733 kb on - strandat 367.753 kb on - strandat 367.753 kb on - strandat 367.754 kb on + strandat 367.759 kb on + strandat 367.760 kb on - strandat 367.762 kb on + strandat 367.762 kb on + strandat 367.762 kb on + strandat 367.762 kb on + strandat 367.764 kb on + strandat 367.859 kb on + strand, within BACOVA_02598at 367.860 kb on - strand, within BACOVA_02598at 367.884 kb on + strand, within BACOVA_02598at 367.894 kb on + strand, within BACOVA_02598at 367.953 kb on + strand, within BACOVA_02598at 367.953 kb on + strand, within BACOVA_02598at 367.958 kb on + strand, within BACOVA_02598at 367.990 kb on - strand, within BACOVA_02598at 368.026 kb on - strand, within BACOVA_02598at 368.043 kb on + strand, within BACOVA_02598at 368.057 kb on + strand, within BACOVA_02598at 368.066 kb on - strand, within BACOVA_02598at 368.066 kb on - strand, within BACOVA_02598at 368.097 kb on + strand, within BACOVA_02598at 368.099 kb on + strand, within BACOVA_02598at 368.099 kb on + strand, within BACOVA_02598at 368.100 kb on - strand, within BACOVA_02598at 368.100 kb on - strand, within BACOVA_02598at 368.114 kb on - strand, within BACOVA_02598at 368.148 kb on + strand, within BACOVA_02598at 368.166 kb on - strand, within BACOVA_02598at 368.182 kb on + strand, within BACOVA_02598at 368.183 kb on - strand, within BACOVA_02598at 368.187 kb on + strand, within BACOVA_02598at 368.213 kb on + strand, within BACOVA_02598at 368.213 kb on + strand, within BACOVA_02598at 368.213 kb on + strand, within BACOVA_02598at 368.214 kb on - strand, within BACOVA_02598at 368.222 kb on - strand, within BACOVA_02598at 368.226 kb on - strand, within BACOVA_02598at 368.287 kb on - strand, within BACOVA_02598at 368.436 kb on + strand, within BACOVA_02598at 368.436 kb on + strand, within BACOVA_02598at 368.436 kb on + strand, within BACOVA_02598at 368.436 kb on + strand, within BACOVA_02598at 368.437 kb on - strand, within BACOVA_02598at 368.437 kb on - strand, within BACOVA_02598at 368.437 kb on - strand, within BACOVA_02598at 368.442 kb on - strand, within BACOVA_02598at 368.442 kb on - strand, within BACOVA_02598at 368.523 kb on + strandat 368.548 kb on + strandat 368.570 kb on - strand, within BACOVA_02599at 368.588 kb on + strand, within BACOVA_02599at 368.589 kb on - strand, within BACOVA_02599at 368.590 kb on + strand, within BACOVA_02599at 368.690 kb on + strand, within BACOVA_02599

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Per-strain Table

Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/mL (C)
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366,586 + BACOVA_02595 0.71 -0.1
366,586 + BACOVA_02595 0.71 -1.2
366,609 + BACOVA_02595 0.73 -0.4
366,611 + BACOVA_02595 0.73 -0.2
366,673 + BACOVA_02595 0.77 +1.6
366,674 - BACOVA_02595 0.77 -0.9
367,031 - +0.7
367,031 - +1.8
367,031 - -2.6
367,066 + -0.1
367,073 + +0.4
367,073 + +0.1
367,073 + -2.1
367,074 - +0.2
367,074 - +1.2
367,077 + +1.7
367,080 + -0.4
367,092 + -0.6
367,131 + BACOVA_02596 0.12 -1.0
367,208 + BACOVA_02596 0.27 -0.1
367,239 + BACOVA_02596 0.33 -1.2
367,239 + BACOVA_02596 0.33 -0.3
367,240 - BACOVA_02596 0.33 -0.8
367,266 + BACOVA_02596 0.38 +0.2
367,266 + BACOVA_02596 0.38 +1.0
367,282 - BACOVA_02596 0.41 +1.1
367,326 + BACOVA_02596 0.50 -0.1
367,494 + BACOVA_02596 0.82 +0.8
367,495 - BACOVA_02596 0.83 +0.4
367,495 - BACOVA_02596 0.83 +1.3
367,497 + BACOVA_02596 0.83 +0.2
367,537 - -0.8
367,633 - BACOVA_02597 0.55 +1.8
367,639 - BACOVA_02597 0.60 -1.2
367,680 + -0.0
367,692 + -1.8
367,718 - +1.4
367,733 - -1.1
367,753 - +0.5
367,753 - -0.1
367,754 + -0.0
367,759 + -1.9
367,760 - +1.1
367,762 + -1.8
367,762 + -0.6
367,762 + -1.1
367,762 + +1.1
367,764 + -0.2
367,859 + BACOVA_02598 0.15 -1.4
367,860 - BACOVA_02598 0.15 -0.3
367,884 + BACOVA_02598 0.18 -0.3
367,894 + BACOVA_02598 0.20 +1.4
367,953 + BACOVA_02598 0.27 -0.2
367,953 + BACOVA_02598 0.27 -1.7
367,958 + BACOVA_02598 0.28 -1.2
367,990 - BACOVA_02598 0.32 +0.1
368,026 - BACOVA_02598 0.36 +0.3
368,043 + BACOVA_02598 0.38 +0.4
368,057 + BACOVA_02598 0.40 -0.2
368,066 - BACOVA_02598 0.41 +2.2
368,066 - BACOVA_02598 0.41 +1.4
368,097 + BACOVA_02598 0.45 +0.6
368,099 + BACOVA_02598 0.45 -0.0
368,099 + BACOVA_02598 0.45 -0.1
368,100 - BACOVA_02598 0.46 +1.4
368,100 - BACOVA_02598 0.46 -0.2
368,114 - BACOVA_02598 0.47 -0.1
368,148 + BACOVA_02598 0.52 -0.4
368,166 - BACOVA_02598 0.54 +0.5
368,182 + BACOVA_02598 0.56 +0.3
368,183 - BACOVA_02598 0.56 -1.1
368,187 + BACOVA_02598 0.56 +1.7
368,213 + BACOVA_02598 0.60 +0.7
368,213 + BACOVA_02598 0.60 +3.5
368,213 + BACOVA_02598 0.60 -2.0
368,214 - BACOVA_02598 0.60 +0.4
368,222 - BACOVA_02598 0.61 -1.2
368,226 - BACOVA_02598 0.61 +0.8
368,287 - BACOVA_02598 0.69 -0.1
368,436 + BACOVA_02598 0.88 -2.8
368,436 + BACOVA_02598 0.88 -0.4
368,436 + BACOVA_02598 0.88 +0.6
368,436 + BACOVA_02598 0.88 -0.4
368,437 - BACOVA_02598 0.88 +1.2
368,437 - BACOVA_02598 0.88 +1.5
368,437 - BACOVA_02598 0.88 -0.1
368,442 - BACOVA_02598 0.89 -0.7
368,442 - BACOVA_02598 0.89 -0.4
368,523 + -0.8
368,548 + -0.5
368,570 - BACOVA_02599 0.14 -1.2
368,588 + BACOVA_02599 0.20 -2.6
368,589 - BACOVA_02599 0.20 +0.6
368,590 + BACOVA_02599 0.21 -1.0
368,690 + BACOVA_02599 0.54 +0.2

Or see this region's nucleotide sequence