Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt purH and OKGIIK_16810 are separated by 69 nucleotides OKGIIK_16810 and OKGIIK_16815 are separated by 145 nucleotides
OKGIIK_16805: purH - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 3,685,929 to 3,687,539
purH
OKGIIK_16810: OKGIIK_16810 - Putative Fis-like DNA-binding protein, at 3,687,609 to 3,687,932
_16810
OKGIIK_16815: OKGIIK_16815 - DUF3426 domain-containing protein, at 3,688,078 to 3,688,938
_16815
Position (kb)
3687
3688 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.574 kb on + strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.575 kb on - strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.610 kb on + strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.611 kb on - strand at 3687.796 kb on + strand, within OKGIIK_16810 at 3687.804 kb on + strand, within OKGIIK_16810 at 3687.915 kb on + strand at 3687.976 kb on - strand at 3688.072 kb on + strand at 3688.072 kb on + strand at 3688.073 kb on - strand at 3688.073 kb on - strand at 3688.073 kb on - strand at 3688.079 kb on + strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.080 kb on - strand at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.196 kb on + strand, within OKGIIK_16815 at 3688.197 kb on - strand, within OKGIIK_16815 at 3688.227 kb on + strand, within OKGIIK_16815 at 3688.227 kb on + strand, within OKGIIK_16815 at 3688.730 kb on + strand, within OKGIIK_16815
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 3,687,574 + -0.0 3,687,574 + -1.9 3,687,574 + +0.2 3,687,574 + -0.0 3,687,574 + +0.4 3,687,574 + -0.9 3,687,574 + +0.2 3,687,574 + +0.7 3,687,574 + -0.2 3,687,574 + +0.2 3,687,574 + -0.1 3,687,574 + -0.3 3,687,574 + +1.2 3,687,574 + +0.5 3,687,575 - +0.7 3,687,575 - +0.1 3,687,575 - -0.5 3,687,575 - -0.7 3,687,575 - -1.1 3,687,575 - +0.7 3,687,575 - +0.1 3,687,575 - +2.4 3,687,575 - +1.7 3,687,575 - +1.1 3,687,575 - -0.5 3,687,575 - +0.9 3,687,610 + +1.3 3,687,610 + +0.4 3,687,610 + +0.4 3,687,610 + -1.2 3,687,610 + +1.9 3,687,610 + +0.9 3,687,610 + -0.3 3,687,611 - -0.6 3,687,611 - -0.0 3,687,611 - -1.2 3,687,611 - -1.4 3,687,796 + OKGIIK_16810 0.58 -1.6 3,687,804 + OKGIIK_16810 0.60 -1.2 3,687,915 + +0.3 3,687,976 - -0.3 3,688,072 + -1.5 3,688,072 + -0.6 3,688,073 - +0.1 3,688,073 - -0.5 3,688,073 - -1.5 3,688,079 + -1.2 3,688,080 - -0.8 3,688,080 - +0.5 3,688,080 - +0.8 3,688,080 - +0.1 3,688,196 + OKGIIK_16815 0.14 +0.4 3,688,196 + OKGIIK_16815 0.14 -0.2 3,688,196 + OKGIIK_16815 0.14 -0.9 3,688,197 - OKGIIK_16815 0.14 -1.4 3,688,227 + OKGIIK_16815 0.17 +0.4 3,688,227 + OKGIIK_16815 0.17 -2.8 3,688,730 + OKGIIK_16815 0.76 -1.7
Or see this region's nucleotide sequence