Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_15565 and OKGIIK_15570 are separated by 170 nucleotides OKGIIK_15570 and OKGIIK_15575 are separated by 75 nucleotides
OKGIIK_15565: OKGIIK_15565 - Cyclic beta 1-2 glucan synthetase, at 3,390,741 to 3,399,377
_15565
OKGIIK_15570: OKGIIK_15570 - GCN5 family acetyltransferase, at 3,399,548 to 3,400,012
_15570
OKGIIK_15575: OKGIIK_15575 - Diguanylate cyclase, at 3,400,088 to 3,402,571
_15575
Position (kb)
3399
3400
3401 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3398.872 kb on + strand at 3398.872 kb on + strand at 3398.872 kb on + strand at 3398.872 kb on + strand at 3398.872 kb on + strand at 3398.873 kb on - strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.950 kb on + strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3398.951 kb on - strand at 3399.008 kb on - strand at 3399.008 kb on - strand at 3399.058 kb on + strand at 3399.058 kb on + strand at 3399.058 kb on + strand at 3399.058 kb on + strand at 3399.059 kb on - strand at 3399.059 kb on - strand at 3399.059 kb on - strand at 3399.299 kb on + strand at 3399.299 kb on + strand at 3399.299 kb on + strand at 3399.299 kb on + strand at 3399.299 kb on + strand at 3399.300 kb on - strand at 3399.300 kb on - strand at 3399.513 kb on + strand at 3399.513 kb on + strand at 3399.514 kb on - strand at 3399.514 kb on - strand at 3399.704 kb on + strand, within OKGIIK_15570 at 3399.704 kb on + strand, within OKGIIK_15570 at 3399.704 kb on + strand, within OKGIIK_15570 at 3399.704 kb on + strand, within OKGIIK_15570 at 3399.704 kb on + strand, within OKGIIK_15570 at 3399.705 kb on - strand, within OKGIIK_15570 at 3399.705 kb on - strand, within OKGIIK_15570 at 3399.806 kb on + strand, within OKGIIK_15570 at 3399.806 kb on + strand, within OKGIIK_15570 at 3399.806 kb on + strand, within OKGIIK_15570 at 3399.806 kb on + strand, within OKGIIK_15570 at 3399.806 kb on + strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.807 kb on - strand, within OKGIIK_15570 at 3399.851 kb on + strand, within OKGIIK_15570 at 3399.851 kb on + strand, within OKGIIK_15570 at 3399.851 kb on + strand, within OKGIIK_15570 at 3399.905 kb on + strand, within OKGIIK_15570 at 3399.906 kb on - strand, within OKGIIK_15570 at 3399.941 kb on + strand, within OKGIIK_15570 at 3399.942 kb on - strand, within OKGIIK_15570 at 3399.942 kb on - strand, within OKGIIK_15570 at 3399.942 kb on - strand, within OKGIIK_15570 at 3399.942 kb on - strand, within OKGIIK_15570 at 3399.972 kb on - strand at 3399.972 kb on - strand at 3399.981 kb on - strand at 3399.981 kb on - strand at 3399.981 kb on - strand at 3400.011 kb on - strand at 3400.011 kb on - strand at 3400.178 kb on + strand at 3400.178 kb on + strand at 3400.179 kb on - strand at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.350 kb on + strand, within OKGIIK_15575 at 3400.351 kb on - strand, within OKGIIK_15575 at 3400.351 kb on - strand, within OKGIIK_15575 at 3400.351 kb on - strand, within OKGIIK_15575 at 3400.351 kb on - strand, within OKGIIK_15575 at 3400.365 kb on + strand, within OKGIIK_15575 at 3400.366 kb on - strand, within OKGIIK_15575 at 3400.533 kb on + strand, within OKGIIK_15575 at 3400.533 kb on + strand, within OKGIIK_15575 at 3400.533 kb on + strand, within OKGIIK_15575 at 3400.534 kb on - strand, within OKGIIK_15575 at 3400.717 kb on - strand, within OKGIIK_15575 at 3400.800 kb on + strand, within OKGIIK_15575 at 3400.800 kb on + strand, within OKGIIK_15575 at 3400.800 kb on + strand, within OKGIIK_15575 at 3400.801 kb on - strand, within OKGIIK_15575 at 3400.902 kb on + strand, within OKGIIK_15575 at 3400.989 kb on + strand, within OKGIIK_15575 at 3400.990 kb on - strand, within OKGIIK_15575
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 3,398,872 + -1.3 3,398,872 + +1.9 3,398,872 + +0.4 3,398,872 + -1.4 3,398,872 + -1.0 3,398,873 - -0.2 3,398,950 + -1.8 3,398,950 + +0.5 3,398,950 + -0.3 3,398,950 + -0.8 3,398,950 + -0.8 3,398,950 + +0.0 3,398,950 + -1.1 3,398,950 + -1.3 3,398,951 - +0.0 3,398,951 - +0.0 3,398,951 - +0.2 3,398,951 - -1.0 3,398,951 - -1.0 3,398,951 - -2.0 3,398,951 - +0.4 3,399,008 - -0.4 3,399,008 - -0.1 3,399,058 + -0.4 3,399,058 + -1.3 3,399,058 + +1.2 3,399,058 + +0.4 3,399,059 - +1.2 3,399,059 - +0.0 3,399,059 - -1.7 3,399,299 + -0.8 3,399,299 + -0.1 3,399,299 + +0.6 3,399,299 + -1.3 3,399,299 + -1.8 3,399,300 - -0.6 3,399,300 - +0.0 3,399,513 + -1.0 3,399,513 + -0.7 3,399,514 - +0.8 3,399,514 - -1.4 3,399,704 + OKGIIK_15570 0.34 -0.6 3,399,704 + OKGIIK_15570 0.34 -2.4 3,399,704 + OKGIIK_15570 0.34 +0.3 3,399,704 + OKGIIK_15570 0.34 +0.1 3,399,704 + OKGIIK_15570 0.34 +0.1 3,399,705 - OKGIIK_15570 0.34 +0.4 3,399,705 - OKGIIK_15570 0.34 -1.8 3,399,806 + OKGIIK_15570 0.55 -0.6 3,399,806 + OKGIIK_15570 0.55 -0.4 3,399,806 + OKGIIK_15570 0.55 -2.0 3,399,806 + OKGIIK_15570 0.55 -1.4 3,399,806 + OKGIIK_15570 0.55 -2.1 3,399,807 - OKGIIK_15570 0.56 -0.8 3,399,807 - OKGIIK_15570 0.56 -2.0 3,399,807 - OKGIIK_15570 0.56 +0.5 3,399,807 - OKGIIK_15570 0.56 -1.5 3,399,807 - OKGIIK_15570 0.56 +0.9 3,399,807 - OKGIIK_15570 0.56 +1.0 3,399,807 - OKGIIK_15570 0.56 -0.6 3,399,807 - OKGIIK_15570 0.56 -1.3 3,399,807 - OKGIIK_15570 0.56 +0.6 3,399,851 + OKGIIK_15570 0.65 +0.0 3,399,851 + OKGIIK_15570 0.65 +0.1 3,399,851 + OKGIIK_15570 0.65 -0.3 3,399,905 + OKGIIK_15570 0.77 -1.6 3,399,906 - OKGIIK_15570 0.77 +0.9 3,399,941 + OKGIIK_15570 0.85 -0.6 3,399,942 - OKGIIK_15570 0.85 -1.1 3,399,942 - OKGIIK_15570 0.85 -1.1 3,399,942 - OKGIIK_15570 0.85 +0.2 3,399,942 - OKGIIK_15570 0.85 -0.3 3,399,972 - -1.0 3,399,972 - -3.0 3,399,981 - +0.6 3,399,981 - +1.7 3,399,981 - +1.2 3,400,011 - -1.3 3,400,011 - +0.4 3,400,178 + -0.2 3,400,178 + +0.8 3,400,179 - -0.1 3,400,350 + OKGIIK_15575 0.11 -1.0 3,400,350 + OKGIIK_15575 0.11 -0.2 3,400,350 + OKGIIK_15575 0.11 -0.9 3,400,350 + OKGIIK_15575 0.11 -1.2 3,400,350 + OKGIIK_15575 0.11 -1.1 3,400,350 + OKGIIK_15575 0.11 -2.0 3,400,351 - OKGIIK_15575 0.11 +0.6 3,400,351 - OKGIIK_15575 0.11 +1.5 3,400,351 - OKGIIK_15575 0.11 +0.4 3,400,351 - OKGIIK_15575 0.11 +0.0 3,400,365 + OKGIIK_15575 0.11 -2.4 3,400,366 - OKGIIK_15575 0.11 -1.0 3,400,533 + OKGIIK_15575 0.18 -0.9 3,400,533 + OKGIIK_15575 0.18 -0.0 3,400,533 + OKGIIK_15575 0.18 -0.2 3,400,534 - OKGIIK_15575 0.18 +0.0 3,400,717 - OKGIIK_15575 0.25 -1.3 3,400,800 + OKGIIK_15575 0.29 +1.0 3,400,800 + OKGIIK_15575 0.29 -1.1 3,400,800 + OKGIIK_15575 0.29 -0.6 3,400,801 - OKGIIK_15575 0.29 -2.1 3,400,902 + OKGIIK_15575 0.33 -1.6 3,400,989 + OKGIIK_15575 0.36 -0.3 3,400,990 - OKGIIK_15575 0.36 +0.3
Or see this region's nucleotide sequence