Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt wcaA and OKGIIK_15475 are separated by 66 nucleotides OKGIIK_15475 and OKGIIK_15480 are separated by 16 nucleotides OKGIIK_15480 and yobV are separated by 11 nucleotides
OKGIIK_15470: wcaA - dolichol-phosphate mannosyltransferase, at 3,367,306 to 3,368,022
wcaA
OKGIIK_15475: OKGIIK_15475 - DUF488 domain-containing protein, at 3,368,089 to 3,368,457
_15475
OKGIIK_15480: OKGIIK_15480 - Serine protease, at 3,368,474 to 3,369,412
_15480
OKGIIK_15485: yobV - transcriptional regulator, at 3,369,424 to 3,370,407
yobV
Position (kb)
3368
3369
3370 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.054 kb on + strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.055 kb on - strand at 3368.113 kb on + strand at 3368.114 kb on - strand at 3368.114 kb on - strand at 3368.114 kb on - strand at 3368.114 kb on - strand at 3368.114 kb on - strand at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.204 kb on + strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.205 kb on - strand, within OKGIIK_15475 at 3368.291 kb on - strand, within OKGIIK_15475 at 3368.291 kb on - strand, within OKGIIK_15475 at 3368.291 kb on - strand, within OKGIIK_15475 at 3368.420 kb on - strand, within OKGIIK_15475 at 3368.420 kb on - strand, within OKGIIK_15475 at 3368.420 kb on - strand, within OKGIIK_15475 at 3368.420 kb on - strand, within OKGIIK_15475 at 3368.445 kb on - strand at 3368.455 kb on + strand at 3368.456 kb on - strand at 3368.577 kb on + strand, within OKGIIK_15480 at 3368.577 kb on + strand, within OKGIIK_15480 at 3368.577 kb on + strand, within OKGIIK_15480 at 3368.577 kb on + strand, within OKGIIK_15480 at 3368.625 kb on + strand, within OKGIIK_15480 at 3368.625 kb on + strand, within OKGIIK_15480 at 3368.625 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.856 kb on + strand, within OKGIIK_15480 at 3368.857 kb on - strand, within OKGIIK_15480 at 3369.204 kb on + strand, within OKGIIK_15480 at 3369.204 kb on + strand, within OKGIIK_15480 at 3369.205 kb on - strand, within OKGIIK_15480 at 3369.205 kb on - strand, within OKGIIK_15480
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 3,368,054 + -0.4 3,368,054 + +0.6 3,368,054 + -0.9 3,368,054 + +0.3 3,368,054 + +0.1 3,368,054 + +0.4 3,368,054 + +0.6 3,368,054 + +0.3 3,368,055 - +0.3 3,368,055 - +1.0 3,368,055 - +0.2 3,368,055 - -0.1 3,368,055 - +0.0 3,368,055 - -3.3 3,368,055 - -0.9 3,368,055 - +1.0 3,368,055 - +1.5 3,368,055 - -0.2 3,368,113 + -1.4 3,368,114 - +1.2 3,368,114 - +1.9 3,368,114 - +0.7 3,368,114 - -0.7 3,368,114 - -1.3 3,368,204 + OKGIIK_15475 0.31 +0.6 3,368,204 + OKGIIK_15475 0.31 +1.0 3,368,204 + OKGIIK_15475 0.31 +1.6 3,368,204 + OKGIIK_15475 0.31 +0.1 3,368,204 + OKGIIK_15475 0.31 -0.4 3,368,204 + OKGIIK_15475 0.31 +0.0 3,368,205 - OKGIIK_15475 0.31 +0.5 3,368,205 - OKGIIK_15475 0.31 +0.8 3,368,205 - OKGIIK_15475 0.31 +0.5 3,368,205 - OKGIIK_15475 0.31 -2.3 3,368,205 - OKGIIK_15475 0.31 -0.9 3,368,205 - OKGIIK_15475 0.31 -0.2 3,368,291 - OKGIIK_15475 0.55 -0.9 3,368,291 - OKGIIK_15475 0.55 -2.1 3,368,291 - OKGIIK_15475 0.55 +0.6 3,368,420 - OKGIIK_15475 0.90 -0.6 3,368,420 - OKGIIK_15475 0.90 +0.8 3,368,420 - OKGIIK_15475 0.90 -0.6 3,368,420 - OKGIIK_15475 0.90 +0.7 3,368,445 - +0.6 3,368,455 + +0.1 3,368,456 - +0.9 3,368,577 + OKGIIK_15480 0.11 -1.0 3,368,577 + OKGIIK_15480 0.11 -1.0 3,368,577 + OKGIIK_15480 0.11 +0.9 3,368,577 + OKGIIK_15480 0.11 +0.8 3,368,625 + OKGIIK_15480 0.16 +0.6 3,368,625 + OKGIIK_15480 0.16 +0.2 3,368,625 + OKGIIK_15480 0.16 -1.4 3,368,856 + OKGIIK_15480 0.41 -0.6 3,368,856 + OKGIIK_15480 0.41 -1.3 3,368,856 + OKGIIK_15480 0.41 -0.6 3,368,856 + OKGIIK_15480 0.41 +0.6 3,368,856 + OKGIIK_15480 0.41 -0.2 3,368,856 + OKGIIK_15480 0.41 +0.3 3,368,856 + OKGIIK_15480 0.41 -0.7 3,368,856 + OKGIIK_15480 0.41 -0.2 3,368,856 + OKGIIK_15480 0.41 -0.9 3,368,857 - OKGIIK_15480 0.41 -0.2 3,369,204 + OKGIIK_15480 0.78 +0.3 3,369,204 + OKGIIK_15480 0.78 -0.6 3,369,205 - OKGIIK_15480 0.78 +0.7 3,369,205 - OKGIIK_15480 0.78 +0.6
Or see this region's nucleotide sequence