Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14775 and OKGIIK_14780 are separated by 76 nucleotides OKGIIK_14780 and OKGIIK_14785 overlap by 4 nucleotides OKGIIK_14785 and OKGIIK_14790 overlap by 4 nucleotides
OKGIIK_14775: OKGIIK_14775 - hypothetical protein, at 3,220,687 to 3,221,586
_14775
OKGIIK_14780: OKGIIK_14780 - RNA polymerase subunit sigma-70, at 3,221,663 to 3,222,247
_14780
OKGIIK_14785: OKGIIK_14785 - Anti-sigma-W factor RsiW, at 3,222,244 to 3,222,891
_14785
OKGIIK_14790: OKGIIK_14790 - Serine protease, at 3,222,888 to 3,224,192
_14790
Position (kb)
3222
3223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3221.309 kb on + strand, within OKGIIK_14775 at 3221.359 kb on + strand, within OKGIIK_14775 at 3221.359 kb on + strand, within OKGIIK_14775 at 3221.359 kb on + strand, within OKGIIK_14775 at 3221.359 kb on + strand, within OKGIIK_14775 at 3221.360 kb on - strand, within OKGIIK_14775 at 3221.368 kb on + strand, within OKGIIK_14775 at 3221.368 kb on + strand, within OKGIIK_14775 at 3221.375 kb on - strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.398 kb on + strand, within OKGIIK_14775 at 3221.399 kb on - strand, within OKGIIK_14775 at 3221.399 kb on - strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.416 kb on + strand, within OKGIIK_14775 at 3221.417 kb on - strand, within OKGIIK_14775 at 3221.446 kb on + strand, within OKGIIK_14775 at 3221.447 kb on - strand, within OKGIIK_14775 at 3221.447 kb on - strand, within OKGIIK_14775 at 3221.447 kb on - strand, within OKGIIK_14775 at 3221.447 kb on - strand, within OKGIIK_14775 at 3221.447 kb on - strand, within OKGIIK_14775 at 3221.617 kb on + strand at 3221.617 kb on + strand at 3221.617 kb on + strand at 3221.618 kb on - strand at 3221.618 kb on - strand at 3221.618 kb on - strand at 3221.618 kb on - strand at 3221.618 kb on - strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.621 kb on + strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.622 kb on - strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.648 kb on + strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.649 kb on - strand at 3221.753 kb on + strand, within OKGIIK_14780 at 3221.753 kb on + strand, within OKGIIK_14780 at 3221.754 kb on - strand, within OKGIIK_14780 at 3221.754 kb on - strand, within OKGIIK_14780 at 3221.754 kb on - strand, within OKGIIK_14780 at 3221.754 kb on - strand, within OKGIIK_14780 at 3221.762 kb on + strand, within OKGIIK_14780 at 3221.762 kb on + strand, within OKGIIK_14780 at 3221.762 kb on + strand, within OKGIIK_14780 at 3221.762 kb on + strand, within OKGIIK_14780 at 3221.762 kb on + strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.763 kb on - strand, within OKGIIK_14780 at 3221.916 kb on - strand, within OKGIIK_14780 at 3222.092 kb on + strand, within OKGIIK_14780 at 3222.092 kb on + strand, within OKGIIK_14780 at 3222.092 kb on + strand, within OKGIIK_14780 at 3222.093 kb on - strand, within OKGIIK_14780 at 3222.093 kb on - strand, within OKGIIK_14780 at 3222.107 kb on - strand, within OKGIIK_14780 at 3222.148 kb on + strand, within OKGIIK_14780 at 3222.149 kb on - strand, within OKGIIK_14780 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.784 kb on + strand, within OKGIIK_14785 at 3222.785 kb on - strand, within OKGIIK_14785 at 3222.785 kb on - strand, within OKGIIK_14785 at 3222.785 kb on - strand, within OKGIIK_14785 at 3222.785 kb on - strand, within OKGIIK_14785 at 3223.102 kb on - strand, within OKGIIK_14790 at 3223.116 kb on + strand, within OKGIIK_14790 at 3223.119 kb on + strand, within OKGIIK_14790 at 3223.119 kb on + strand, within OKGIIK_14790 at 3223.119 kb on + strand, within OKGIIK_14790 at 3223.119 kb on + strand, within OKGIIK_14790 at 3223.119 kb on + strand, within OKGIIK_14790 at 3223.120 kb on - strand, within OKGIIK_14790 at 3223.120 kb on - strand, within OKGIIK_14790 at 3223.170 kb on + strand, within OKGIIK_14790 at 3223.218 kb on + strand, within OKGIIK_14790 at 3223.218 kb on + strand, within OKGIIK_14790 at 3223.218 kb on + strand, within OKGIIK_14790 at 3223.219 kb on - strand, within OKGIIK_14790 at 3223.219 kb on - strand, within OKGIIK_14790 at 3223.220 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.223 kb on + strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.224 kb on - strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.329 kb on + strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.651 kb on - strand, within OKGIIK_14790 at 3223.651 kb on - strand, within OKGIIK_14790
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 3,221,309 + OKGIIK_14775 0.69 -0.2 3,221,359 + OKGIIK_14775 0.75 -1.0 3,221,359 + OKGIIK_14775 0.75 +1.0 3,221,359 + OKGIIK_14775 0.75 -0.3 3,221,359 + OKGIIK_14775 0.75 +0.3 3,221,360 - OKGIIK_14775 0.75 +0.3 3,221,368 + OKGIIK_14775 0.76 -0.5 3,221,368 + OKGIIK_14775 0.76 -2.0 3,221,375 - OKGIIK_14775 0.76 -0.7 3,221,398 + OKGIIK_14775 0.79 -0.4 3,221,398 + OKGIIK_14775 0.79 +0.6 3,221,398 + OKGIIK_14775 0.79 -1.1 3,221,398 + OKGIIK_14775 0.79 +1.4 3,221,398 + OKGIIK_14775 0.79 -2.5 3,221,398 + OKGIIK_14775 0.79 -1.6 3,221,398 + OKGIIK_14775 0.79 +0.4 3,221,398 + OKGIIK_14775 0.79 -0.3 3,221,398 + OKGIIK_14775 0.79 +1.0 3,221,399 - OKGIIK_14775 0.79 -0.3 3,221,399 - OKGIIK_14775 0.79 +0.1 3,221,416 + OKGIIK_14775 0.81 +0.4 3,221,416 + OKGIIK_14775 0.81 -0.4 3,221,416 + OKGIIK_14775 0.81 +0.4 3,221,416 + OKGIIK_14775 0.81 -0.5 3,221,416 + OKGIIK_14775 0.81 +0.3 3,221,416 + OKGIIK_14775 0.81 -2.2 3,221,417 - OKGIIK_14775 0.81 -1.3 3,221,446 + OKGIIK_14775 0.84 -0.1 3,221,447 - OKGIIK_14775 0.84 +0.6 3,221,447 - OKGIIK_14775 0.84 +0.0 3,221,447 - OKGIIK_14775 0.84 +0.1 3,221,447 - OKGIIK_14775 0.84 +0.7 3,221,447 - OKGIIK_14775 0.84 +1.2 3,221,617 + -0.2 3,221,617 + -1.0 3,221,617 + -0.2 3,221,618 - +0.0 3,221,618 - +0.7 3,221,618 - +1.0 3,221,618 - +0.4 3,221,618 - -0.4 3,221,621 + +0.3 3,221,621 + -0.2 3,221,621 + -1.0 3,221,621 + -0.6 3,221,621 + -1.3 3,221,621 + -0.5 3,221,621 + -0.2 3,221,621 + -0.1 3,221,621 + +0.6 3,221,621 + +0.4 3,221,621 + -1.0 3,221,621 + -0.3 3,221,621 + +0.3 3,221,622 - -1.0 3,221,622 - +0.6 3,221,622 - +0.2 3,221,622 - -0.1 3,221,622 - -1.4 3,221,622 - -2.0 3,221,622 - -0.2 3,221,622 - -0.1 3,221,622 - -0.0 3,221,622 - -1.6 3,221,622 - -1.0 3,221,622 - -0.0 3,221,622 - -0.7 3,221,622 - -0.8 3,221,622 - -0.7 3,221,622 - +0.2 3,221,622 - +0.6 3,221,648 + +0.1 3,221,648 + +1.1 3,221,648 + +0.1 3,221,648 + -0.2 3,221,648 + -0.2 3,221,648 + -0.2 3,221,648 + -0.2 3,221,648 + -0.5 3,221,648 + -0.4 3,221,648 + -0.9 3,221,648 + -1.3 3,221,649 - +0.6 3,221,649 - -0.6 3,221,649 - +1.2 3,221,649 - -0.2 3,221,649 - -0.1 3,221,649 - +1.0 3,221,649 - -1.3 3,221,753 + OKGIIK_14780 0.15 +1.3 3,221,753 + OKGIIK_14780 0.15 -0.7 3,221,754 - OKGIIK_14780 0.16 +1.0 3,221,754 - OKGIIK_14780 0.16 -0.6 3,221,754 - OKGIIK_14780 0.16 +0.7 3,221,754 - OKGIIK_14780 0.16 +0.2 3,221,762 + OKGIIK_14780 0.17 +1.0 3,221,762 + OKGIIK_14780 0.17 -0.2 3,221,762 + OKGIIK_14780 0.17 +0.8 3,221,762 + OKGIIK_14780 0.17 +0.6 3,221,762 + OKGIIK_14780 0.17 -0.0 3,221,763 - OKGIIK_14780 0.17 -0.2 3,221,763 - OKGIIK_14780 0.17 -2.6 3,221,763 - OKGIIK_14780 0.17 -0.9 3,221,763 - OKGIIK_14780 0.17 +1.0 3,221,763 - OKGIIK_14780 0.17 +0.2 3,221,763 - OKGIIK_14780 0.17 +0.7 3,221,763 - OKGIIK_14780 0.17 -1.5 3,221,763 - OKGIIK_14780 0.17 -1.3 3,221,916 - OKGIIK_14780 0.43 +1.3 3,222,092 + OKGIIK_14780 0.73 -0.4 3,222,092 + OKGIIK_14780 0.73 +0.5 3,222,092 + OKGIIK_14780 0.73 -0.3 3,222,093 - OKGIIK_14780 0.74 -0.2 3,222,093 - OKGIIK_14780 0.74 +0.7 3,222,107 - OKGIIK_14780 0.76 +1.2 3,222,148 + OKGIIK_14780 0.83 -0.0 3,222,149 - OKGIIK_14780 0.83 +0.3 3,222,784 + OKGIIK_14785 0.83 +1.2 3,222,784 + OKGIIK_14785 0.83 +2.5 3,222,784 + OKGIIK_14785 0.83 +0.2 3,222,784 + OKGIIK_14785 0.83 +0.4 3,222,784 + OKGIIK_14785 0.83 -1.0 3,222,784 + OKGIIK_14785 0.83 -1.6 3,222,784 + OKGIIK_14785 0.83 -1.6 3,222,785 - OKGIIK_14785 0.83 -0.0 3,222,785 - OKGIIK_14785 0.83 -1.6 3,222,785 - OKGIIK_14785 0.83 -1.0 3,222,785 - OKGIIK_14785 0.83 -0.6 3,223,102 - OKGIIK_14790 0.16 -0.5 3,223,116 + OKGIIK_14790 0.17 +0.5 3,223,119 + OKGIIK_14790 0.18 -0.6 3,223,119 + OKGIIK_14790 0.18 -1.3 3,223,119 + OKGIIK_14790 0.18 +0.6 3,223,119 + OKGIIK_14790 0.18 -0.4 3,223,119 + OKGIIK_14790 0.18 +0.7 3,223,120 - OKGIIK_14790 0.18 +0.9 3,223,120 - OKGIIK_14790 0.18 -0.4 3,223,170 + OKGIIK_14790 0.22 -0.3 3,223,218 + OKGIIK_14790 0.25 +0.4 3,223,218 + OKGIIK_14790 0.25 -0.3 3,223,218 + OKGIIK_14790 0.25 +0.1 3,223,219 - OKGIIK_14790 0.25 -1.0 3,223,219 - OKGIIK_14790 0.25 -0.3 3,223,220 + OKGIIK_14790 0.25 -0.6 3,223,223 + OKGIIK_14790 0.26 +0.3 3,223,223 + OKGIIK_14790 0.26 -0.0 3,223,223 + OKGIIK_14790 0.26 -0.0 3,223,223 + OKGIIK_14790 0.26 -0.6 3,223,223 + OKGIIK_14790 0.26 +0.4 3,223,223 + OKGIIK_14790 0.26 -1.0 3,223,223 + OKGIIK_14790 0.26 -1.0 3,223,223 + OKGIIK_14790 0.26 +0.9 3,223,223 + OKGIIK_14790 0.26 +2.2 3,223,223 + OKGIIK_14790 0.26 +0.6 3,223,223 + OKGIIK_14790 0.26 +0.6 3,223,223 + OKGIIK_14790 0.26 -1.6 3,223,223 + OKGIIK_14790 0.26 -0.7 3,223,223 + OKGIIK_14790 0.26 -0.1 3,223,224 - OKGIIK_14790 0.26 -1.8 3,223,224 - OKGIIK_14790 0.26 +1.4 3,223,224 - OKGIIK_14790 0.26 -1.9 3,223,224 - OKGIIK_14790 0.26 +0.4 3,223,224 - OKGIIK_14790 0.26 -0.8 3,223,224 - OKGIIK_14790 0.26 +1.0 3,223,224 - OKGIIK_14790 0.26 -1.6 3,223,224 - OKGIIK_14790 0.26 -1.3 3,223,320 + OKGIIK_14790 0.33 +0.4 3,223,320 + OKGIIK_14790 0.33 -0.2 3,223,320 + OKGIIK_14790 0.33 -1.6 3,223,320 + OKGIIK_14790 0.33 -1.8 3,223,320 + OKGIIK_14790 0.33 -1.4 3,223,321 - OKGIIK_14790 0.33 +0.1 3,223,321 - OKGIIK_14790 0.33 +0.1 3,223,321 - OKGIIK_14790 0.33 -1.0 3,223,321 - OKGIIK_14790 0.33 -1.3 3,223,329 + OKGIIK_14790 0.34 +1.2 3,223,330 - OKGIIK_14790 0.34 -0.7 3,223,330 - OKGIIK_14790 0.34 -1.2 3,223,330 - OKGIIK_14790 0.34 -0.1 3,223,330 - OKGIIK_14790 0.34 -0.6 3,223,359 + OKGIIK_14790 0.36 -0.3 3,223,359 + OKGIIK_14790 0.36 -0.0 3,223,359 + OKGIIK_14790 0.36 -1.8 3,223,359 + OKGIIK_14790 0.36 -0.0 3,223,360 - OKGIIK_14790 0.36 +0.3 3,223,360 - OKGIIK_14790 0.36 -1.0 3,223,360 - OKGIIK_14790 0.36 +1.3 3,223,360 - OKGIIK_14790 0.36 -1.3 3,223,371 + OKGIIK_14790 0.37 -1.0 3,223,371 + OKGIIK_14790 0.37 +1.1 3,223,371 + OKGIIK_14790 0.37 +0.3 3,223,371 + OKGIIK_14790 0.37 -0.6 3,223,371 + OKGIIK_14790 0.37 -0.0 3,223,371 + OKGIIK_14790 0.37 +0.1 3,223,371 + OKGIIK_14790 0.37 -0.1 3,223,372 - OKGIIK_14790 0.37 +0.5 3,223,372 - OKGIIK_14790 0.37 +0.7 3,223,372 - OKGIIK_14790 0.37 +0.3 3,223,372 - OKGIIK_14790 0.37 -1.5 3,223,372 - OKGIIK_14790 0.37 -0.4 3,223,372 - OKGIIK_14790 0.37 -1.8 3,223,651 - OKGIIK_14790 0.58 +0.1 3,223,651 - OKGIIK_14790 0.58 +0.7
Or see this region's nucleotide sequence