Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14580

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
3,183,495	+	araC	OKGIIK_14570	0.89	-1.1
3,183,496	-	araC	OKGIIK_14570	0.89	-1.1
3,183,496	-	araC	OKGIIK_14570	0.89	+0.8
3,183,670	+				-1.0
3,183,671	-				-0.6
3,183,671	-				+0.7
3,183,724	+				-1.0
3,183,724	+				+0.1
3,183,724	+				-0.2
3,183,724	+				+0.5
3,183,724	+				+0.1
3,183,725	-				+0.6
3,183,725	-				-1.5
3,183,725	-				-1.8
3,183,725	-				+0.5
3,183,725	-				-1.3
3,183,831	+	yciW	OKGIIK_14575	0.18	+1.0
3,183,831	+	yciW	OKGIIK_14575	0.18	+0.3
3,183,832	-	yciW	OKGIIK_14575	0.18	-0.6
3,183,832	-	yciW	OKGIIK_14575	0.18	-0.0
3,183,832	-	yciW	OKGIIK_14575	0.18	+0.3
3,184,219	-	yciW	OKGIIK_14575	0.87	-0.0
3,184,310	+				+0.9
3,184,311	-				-0.9
3,184,311	-				-0.3
3,184,393	-				-0.9
3,184,393	-				+0.4
3,184,393	-				-0.2
3,184,393	-				-1.3
3,184,425	+				+0.2
3,184,425	+				+0.3
3,184,425	+				+0.8
3,184,426	-				-0.9
3,184,426	-				-0.8
3,184,426	-				-0.9
3,184,426	-				+0.3
3,184,431	+				+0.4
3,184,432	-				-1.0
3,184,461	+		OKGIIK_14580	0.18	-0.5
3,184,461	+		OKGIIK_14580	0.18	-0.1
3,184,461	+		OKGIIK_14580	0.18	-0.0
3,184,461	+		OKGIIK_14580	0.18	+1.0
3,184,461	+		OKGIIK_14580	0.18	+1.4
3,184,461	+		OKGIIK_14580	0.18	-0.1
3,184,461	+		OKGIIK_14580	0.18	+1.2
3,184,461	+		OKGIIK_14580	0.18	+0.1
3,184,461	+		OKGIIK_14580	0.18	-0.5
3,184,461	+		OKGIIK_14580	0.18	-1.5
3,184,461	+		OKGIIK_14580	0.18	-2.5
3,184,461	+		OKGIIK_14580	0.18	+0.6
3,184,461	+		OKGIIK_14580	0.18	+0.5
3,184,462	-		OKGIIK_14580	0.18	-2.5
3,184,462	-		OKGIIK_14580	0.18	-0.9
3,184,462	-		OKGIIK_14580	0.18	+0.0
3,184,462	-		OKGIIK_14580	0.18	-0.4
3,184,464	+		OKGIIK_14580	0.19	+0.1
3,184,465	-		OKGIIK_14580	0.19	+0.8
3,184,465	-		OKGIIK_14580	0.19	-0.1
3,184,518	+		OKGIIK_14580	0.36	+0.4
3,184,518	+		OKGIIK_14580	0.36	+0.4
3,184,518	+		OKGIIK_14580	0.36	+0.6
3,184,518	+		OKGIIK_14580	0.36	-0.2
3,184,518	+		OKGIIK_14580	0.36	-1.0
3,184,518	+		OKGIIK_14580	0.36	-0.0
3,184,519	-		OKGIIK_14580	0.36	-2.6
3,184,519	-		OKGIIK_14580	0.36	-0.1
3,184,519	-		OKGIIK_14580	0.36	-0.0
3,184,521	+		OKGIIK_14580	0.36	+0.0
3,184,521	+		OKGIIK_14580	0.36	-1.6
3,184,522	-		OKGIIK_14580	0.37	-0.0
3,184,522	-		OKGIIK_14580	0.37	-0.4
3,184,522	-		OKGIIK_14580	0.37	-0.6
3,184,522	-		OKGIIK_14580	0.37	+1.0
3,184,522	-		OKGIIK_14580	0.37	-1.6
3,184,572	+		OKGIIK_14580	0.52	-0.4
3,184,722	+				+1.3
3,184,815	-				-0.7
3,184,820	+				+1.3
3,184,820	+				-1.3
3,184,820	+				-0.6
3,184,820	+				-1.3
3,184,820	+				+0.3
3,184,820	+				+0.0
3,184,821	-				-0.5
3,184,821	-				+1.3
3,184,821	-				+0.5
3,184,821	-				-0.0
3,184,821	-				-1.3
3,184,821	-				+1.0
3,184,821	-				-0.3
3,184,826	+				-0.1
3,184,826	+				-0.5
3,184,826	+				-1.3
3,184,826	+				-1.0
3,184,826	+				+1.3
3,184,826	+				+1.1
3,184,826	+				-0.9
3,184,827	-				-0.4
3,184,827	-				-1.0
3,184,827	-				-0.1
3,184,827	-				-1.3
3,184,827	-				-0.6
3,184,827	-				+0.3
3,184,827	-				-0.4
3,184,962	+		OKGIIK_14585	0.27	-0.3
3,184,962	+		OKGIIK_14585	0.27	-0.2
3,184,963	-		OKGIIK_14585	0.28	+0.1
3,184,963	-		OKGIIK_14585	0.28	+0.2
3,184,963	-		OKGIIK_14585	0.28	-1.6
3,184,976	+		OKGIIK_14585	0.31	-0.2
3,184,977	-		OKGIIK_14585	0.31	+0.4
3,184,977	-		OKGIIK_14585	0.31	-1.4
3,184,992	+		OKGIIK_14585	0.35	+1.3
3,184,992	+		OKGIIK_14585	0.35	-1.2
3,184,992	+		OKGIIK_14585	0.35	-1.3
3,184,993	-		OKGIIK_14585	0.35	-1.3
3,184,993	-		OKGIIK_14585	0.35	-0.2
3,184,993	-		OKGIIK_14585	0.35	-0.2
3,185,078	+		OKGIIK_14585	0.55	+0.6
3,185,078	+		OKGIIK_14585	0.55	-1.3
3,185,078	+		OKGIIK_14585	0.55	-1.3
3,185,078	+		OKGIIK_14585	0.55	+2.4
3,185,079	-		OKGIIK_14585	0.55	-0.3
3,185,079	-		OKGIIK_14585	0.55	-0.5
3,185,132	+		OKGIIK_14585	0.68	-0.4
3,185,132	+		OKGIIK_14585	0.68	-1.5
3,185,132	+		OKGIIK_14585	0.68	-1.0
3,185,133	-		OKGIIK_14585	0.68	-2.3
3,185,207	+		OKGIIK_14585	0.86	-3.4
3,185,207	+		OKGIIK_14585	0.86	-0.5
3,185,207	+		OKGIIK_14585	0.86	-0.0
3,185,208	-		OKGIIK_14585	0.86	-0.3
3,185,208	-		OKGIIK_14585	0.86	-0.0
3,185,208	-		OKGIIK_14585	0.86	+0.6
3,185,208	-		OKGIIK_14585	0.86	-0.3
3,185,273	+				-0.4
3,185,273	+				+0.3
3,185,274	-				-0.0
3,185,284	+				-1.6
3,185,284	+				-0.6
3,185,284	+				+0.5
3,185,284	+				-1.3
3,185,284	+				-0.5
3,185,284	+				-0.8
3,185,284	+				-0.2
3,185,285	-				+1.5
3,185,285	-				-0.4
3,185,285	-				+0.6
3,185,285	-				-1.1
3,185,285	-				+0.6
3,185,285	-				-1.0
3,185,285	-				-0.0
3,185,285	-				-0.4
3,185,285	-				+0.2
3,185,285	-				-0.2
3,185,285	-				-2.3
3,185,332	-	yigB	OKGIIK_14590	0.10	-1.3
3,185,404	+	yigB	OKGIIK_14590	0.20	+0.8
3,185,405	-	yigB	OKGIIK_14590	0.20	-0.0
3,185,405	-	yigB	OKGIIK_14590	0.20	+0.4
3,185,405	-	yigB	OKGIIK_14590	0.20	-0.3
3,185,436	+	yigB	OKGIIK_14590	0.24	+0.9
3,185,437	-	yigB	OKGIIK_14590	0.24	-2.9
3,185,641	+	yigB	OKGIIK_14590	0.51	-2.2